FFCP PHASE1:Hg19::chr5:1082062..1082081,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10723 | |EntrezGene=10723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10915 | |HGNC=10915 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-289bp_to_ENST00000510943_5end | |association_with_transcript=-289bp_to_ENST00000510943_5end | ||
|cluster_id=chr5:1082062..1082081,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_3_at_SLC12A7_5end | |description=CAGE_peak_3_at_SLC12A7_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.76e-45!42;CL:0000860!3.15e-44!45;CL:0002009!1.12e-33!65;CL:0002194!2.30e-30!63;CL:0000576!2.30e-30!63;CL:0000040!2.30e-30!63;CL:0000559!2.30e-30!63;CL:0000557!5.36e-30!71;CL:0000766!3.91e-29!76;CL:0000839!2.09e-26!70;CL:0000763!5.18e-23!112;CL:0000049!5.18e-23!112;CL:0000738!3.52e-22!140;CL:0002087!2.69e-17!119;CL:0000988!5.78e-17!182;CL:0000037!1.15e-16!172;CL:0000566!1.15e-16!172;CL:0002031!2.85e-16!124;CL:0002032!7.84e-15!165;CL:0000837!7.84e-15!165;CL:0000453!1.31e-07!5;CL:0000451!5.60e-07!10 | |ontology_enrichment_celltype=CL:0002057!3.76e-45!42;CL:0000860!3.15e-44!45;CL:0002009!1.12e-33!65;CL:0002194!2.30e-30!63;CL:0000576!2.30e-30!63;CL:0000040!2.30e-30!63;CL:0000559!2.30e-30!63;CL:0000557!5.36e-30!71;CL:0000766!3.91e-29!76;CL:0000839!2.09e-26!70;CL:0000763!5.18e-23!112;CL:0000049!5.18e-23!112;CL:0000738!3.52e-22!140;CL:0002087!2.69e-17!119;CL:0000988!5.78e-17!182;CL:0000037!1.15e-16!172;CL:0000566!1.15e-16!172;CL:0002031!2.85e-16!124;CL:0002032!7.84e-15!165;CL:0000837!7.84e-15!165;CL:0000453!1.31e-07!5;CL:0000451!5.60e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-62;33!CL:0002057;2.52e-62;33!CL:0000473;3.49e-42;39!CL:0000234;3.49e-42;39!CL:0000576;3.57e-37;48!CL:0000766;2.22e-22;69!CL:0002087;2.68e-13;104!CL:0001014;6.71e-13;2!CL:0001016;6.71e-13;2!CL:0000771;1.69e-12;2!CL:0000763;5.22e-11;100!CL:0002393;6.74e-10;6!CL:0002397;6.74e-10;6!CL:0000840;2.45e-09;5!CL:0000738;8.25e-09;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.52e-62;33!CL:0002057;2.52e-62;33!CL:0000473;3.49e-42;39!CL:0000234;3.49e-42;39!CL:0000576;3.57e-37;48!CL:0000766;2.22e-22;69!CL:0002087;2.68e-13;104!CL:0001014;6.71e-13;2!CL:0001016;6.71e-13;2!CL:0000771;1.69e-12;2!CL:0000763;5.22e-11;100!CL:0002393;6.74e-10;6!CL:0002397;6.74e-10;6!CL:0000840;2.45e-09;5!CL:0000738;8.25e-09;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.86e-70,42;CL:0002057,2.86e-70,42;CL:0000473,6.65e-61,48;CL:0000234,6.65e-61,48;CL:0002009,1.32e-59,61;CL:0000557,6.77e-54,67;CL:0002194,3.98e-52,59;CL:0000576,3.98e-52,59;CL:0000040,3.98e-52,59;CL:0000559,3.98e-52,59;CL:0000766,1.09e-49,72;CL:0000839,3.57e-46,66;CL:0000763,3.00e-37,108;CL:0000049,3.00e-37,108;CL:0000738,2.47e-33,136;CL:0002031,1.80e-30,120;CL:0002087,2.19e-29,115;CL:0000988,2.77e-26,177;CL:0000037,5.83e-26,168;CL:0002032,2.98e-25,161;CL:0000837,2.98e-25,161;CL:0001014,6.32e-13,2;CL:0001016,6.32e-13,2;CL:0000771,1.84e-12,2;CL:0000134,2.43e-09,354;CL:0000840,2.60e-09,5;CL:0001029,2.60e-09,5;CL:0002320,4.79e-09,361;CL:0000219,5.22e-08,386;CL:0000034,6.75e-08,441;CL:0000048,9.71e-07,427;CL:0002393,9.81e-07,9;CL:0002397,9.81e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-51;42!CL:0000049;1.53e-08;108 | |ontology_enrichment_development_v019=CL:0002057;1.66e-51;42!CL:0000049;1.53e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.44e-26!102;UBERON:0003061!2.44e-26!102;UBERON:0002371!1.62e-25!80;UBERON:0001474!4.71e-23!86;UBERON:0002193!5.66e-23!112;UBERON:0004765!1.74e-19!101;UBERON:0001434!1.74e-19!101;UBERON:0002405!3.70e-18!115;UBERON:0003081!2.30e-11!216;UBERON:0002204!5.41e-11!167 | |ontology_enrichment_uberon=UBERON:0002390!2.44e-26!102;UBERON:0003061!2.44e-26!102;UBERON:0002371!1.62e-25!80;UBERON:0001474!4.71e-23!86;UBERON:0002193!5.66e-23!112;UBERON:0004765!1.74e-19!101;UBERON:0001434!1.74e-19!101;UBERON:0002405!3.70e-18!115;UBERON:0003081!2.30e-11!216;UBERON:0002204!5.41e-11!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-47,76;UBERON:0001474,3.14e-43,82;UBERON:0002390,1.46e-41,98;UBERON:0003061,1.46e-41,98;UBERON:0004765,5.62e-39,90;UBERON:0002405,1.44e-37,93;UBERON:0002193,2.95e-37,108;UBERON:0001434,1.32e-34,100;UBERON:0002204,1.01e-18,167;UBERON:0003081,2.30e-17,203;UBERON:0000926,3.08e-09,315;UBERON:0004120,3.08e-09,315;UBERON:0006603,3.08e-09,315;UBERON:0002384,1.21e-08,371 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,22.1598163412751,29.8811226730511,15.6247826915413,0,0,0,0.145398238779565,0.377875943688809,0.970336244751265,1.39457422143411,1.6446715520873,1.54853185447552,2.3015391385772,2.30544635876191,1.6553756092201,11.0318617835718,39.3745656986134,28.4395621848118,0.376484679085209,1.09162460023138,0.898893937780338,6.73384563215986,16.6883094079569,5.11469700639233,0,0.199463657621632,0.426224750532694,8.70627715885752,23.2627942123367,6.85104473895132,0,2.08593167368081,0,14.5295880632009,46.7712597704207,12.3420331101945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,19.6177997043538,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,1.77327684181734,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,1.48260564340311,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,312.672712382144,0,0,0.661983911750998,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,4.27450393947851,6.96421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.224263725161227,0,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p3@SLC12A7 | |short_description=p3@SLC12A7 | ||
}} | }} |
Latest revision as of 15:56, 19 September 2015
Short description: | p3@SLC12A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC12A7_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -289bp_to_ENST00000510943_5end |
EntrezGene: | SLC12A7 |
HGNC: | 10915 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.34e-47 | 76 |
bone element | 3.14e-43 | 82 |
hematopoietic system | 1.46e-41 | 98 |
blood island | 1.46e-41 | 98 |
skeletal element | 5.62e-39 | 90 |
immune system | 1.44e-37 | 93 |
hemolymphoid system | 2.95e-37 | 108 |
skeletal system | 1.32e-34 | 100 |
musculoskeletal system | 1.01e-18 | 167 |
lateral plate mesoderm | 2.30e-17 | 203 |
mesoderm | 3.08e-09 | 315 |
mesoderm-derived structure | 3.08e-09 | 315 |
presumptive mesoderm | 3.08e-09 | 315 |
connective tissue | 1.21e-08 | 371 |