FFCP PHASE1:Hg19::chr12:2300597..2300606,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:2300597..2300606,+ | |||
|description=CAGE_peak_at_chr12:2300597..2300606,+ | |description=CAGE_peak_at_chr12:2300597..2300606,+ | ||
|id=chr12:2300597..2300606,+ | |id=chr12:2300597..2300606,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;1.10e-13;1!CL:0000819;1.10e-13;1 | |ontology_enrichment_celltype_v019=CL:0000785;1.10e-13;1!CL:0000819;1.10e-13;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,5.85e-14,1;CL:0000785,1.28e-07,2;CL:0000955,1.28e-07,2;CL:0000818,1.28e-07,2;CL:0000954,1.28e-07,2;CL:0000816,1.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.98e-14;1!UBERON:0004140;1.10e-13;1!UBERON:0005062;1.61e-13;4!UBERON:0007284;1.61e-13;4!UBERON:0004872;5.47e-08;7!CL:0000954;1.75e-07;2!UBERON:0006965;1.75e-07;2 | |ontology_enrichment_development_v019=UBERON:0000358;3.98e-14;1!UBERON:0004140;1.10e-13;1!UBERON:0005062;1.61e-13;4!UBERON:0007284;1.61e-13;4!UBERON:0004872;5.47e-08;7!CL:0000954;1.75e-07;2!UBERON:0006965;1.75e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.10e-13;1!DOID:8675;1.10e-13;1!DOID:114;1.05e-07;2 | |ontology_enrichment_disease_v019=DOID:0060073;1.10e-13;1!DOID:8675;1.10e-13;1!DOID:114;1.05e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.85e-14,1;DOID:8675,5.85e-14,1;DOID:114,9.25e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;5.03e-21;20!UBERON:0002619;3.54e-19;22!UBERON:0003978;1.08e-17;3!UBERON:0000946;1.08e-17;3!UBERON:0000956;6.18e-17;25!UBERON:0000203;6.18e-17;25!UBERON:0002146;3.98e-14;1!UBERON:0005623;3.98e-14;1!UBERON:0002134;1.10e-13;1!UBERON:0005208;1.10e-13;1!UBERON:0004145;1.10e-13;1!UBERON:0005946;1.10e-13;1!UBERON:0005965;1.10e-13;1!UBERON:0002078;1.10e-13;1!UBERON:0001872;3.54e-11;5!UBERON:0003528;4.06e-11;34!UBERON:0002020;4.06e-11;34!UBERON:0001893;4.89e-11;34!UBERON:0002791;5.88e-11;32!UBERON:0001869;8.64e-11;32!UBERON:0000200;3.56e-09;6!UBERON:0002780;3.91e-09;41!UBERON:0001890;3.91e-09;41!UBERON:0007100;2.77e-08;25!UBERON:0001871;5.47e-08;6!UBERON:0000073;6.49e-08;53!UBERON:0002616;6.49e-08;53!UBERON:0002771;1.75e-07;2!UBERON:0001876;1.75e-07;2!UBERON:0001897;1.75e-07;2!UBERON:0002702;1.75e-07;2!UBERON:0002081;1.75e-07;2!UBERON:0002133;1.75e-07;2!UBERON:0010225;1.75e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001950;5.03e-21;20!UBERON:0002619;3.54e-19;22!UBERON:0003978;1.08e-17;3!UBERON:0000946;1.08e-17;3!UBERON:0000956;6.18e-17;25!UBERON:0000203;6.18e-17;25!UBERON:0002146;3.98e-14;1!UBERON:0005623;3.98e-14;1!UBERON:0002134;1.10e-13;1!UBERON:0005208;1.10e-13;1!UBERON:0004145;1.10e-13;1!UBERON:0005946;1.10e-13;1!UBERON:0005965;1.10e-13;1!UBERON:0002078;1.10e-13;1!UBERON:0001872;3.54e-11;5!UBERON:0003528;4.06e-11;34!UBERON:0002020;4.06e-11;34!UBERON:0001893;4.89e-11;34!UBERON:0002791;5.88e-11;32!UBERON:0001869;8.64e-11;32!UBERON:0000200;3.56e-09;6!UBERON:0002780;3.91e-09;41!UBERON:0001890;3.91e-09;41!UBERON:0007100;2.77e-08;25!UBERON:0001871;5.47e-08;6!UBERON:0000073;6.49e-08;53!UBERON:0002616;6.49e-08;53!UBERON:0002771;1.75e-07;2!UBERON:0001876;1.75e-07;2!UBERON:0001897;1.75e-07;2!UBERON:0002702;1.75e-07;2!UBERON:0002081;1.75e-07;2!UBERON:0002133;1.75e-07;2!UBERON:0010225;1.75e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.22e-21,20;UBERON:0002619,4.30e-19,22;UBERON:0003978,9.94e-18,3;UBERON:0009751,9.94e-18,3;UBERON:0000946,9.94e-18,3;UBERON:0002523,9.94e-18,3;UBERON:0005983,9.94e-18,3;UBERON:0002165,9.94e-18,3;UBERON:0002062,9.94e-18,3;UBERON:0007280,9.94e-18,3;UBERON:0000956,7.33e-17,25;UBERON:0000203,7.33e-17,25;UBERON:0002146,3.50e-14,1;UBERON:0005623,3.50e-14,1;UBERON:0002780,6.73e-14,41;UBERON:0001890,6.73e-14,41;UBERON:0003080,6.73e-14,41;UBERON:0006240,6.73e-14,41;UBERON:0002134,1.10e-13,1;UBERON:0005208,1.10e-13,1;UBERON:0005946,1.10e-13,1;UBERON:0005965,1.10e-13,1;UBERON:0002078,1.10e-13,1;UBERON:0002791,3.17e-13,32;UBERON:0001869,3.17e-13,32;UBERON:0003528,1.88e-12,34;UBERON:0002020,1.88e-12,34;UBERON:0001893,1.88e-12,34;UBERON:0003075,4.05e-11,82;UBERON:0007284,4.05e-11,82;UBERON:0001872,4.12e-11,5;UBERON:0000073,1.10e-10,53;UBERON:0002616,1.10e-10,53;UBERON:0002346,1.46e-10,86;UBERON:0001049,4.32e-10,56;UBERON:0005068,4.32e-10,56;UBERON:0006241,4.32e-10,56;UBERON:0007135,4.32e-10,56;UBERON:0007023,1.03e-09,114;UBERON:0003056,3.15e-09,61;UBERON:0000200,4.03e-09,6;UBERON:0010371,1.43e-08,104;UBERON:0010314,3.88e-08,132;UBERON:0004797,3.98e-08,7;UBERON:0000955,4.19e-08,68;UBERON:0006238,4.19e-08,68;UBERON:0001871,5.87e-08,6;UBERON:0007100,9.92e-08,27;UBERON:0002771,1.54e-07,2;UBERON:0001897,1.64e-07,2;UBERON:0010225,1.64e-07,2;UBERON:0002081,1.75e-07,2;UBERON:0002133,1.75e-07,2;UBERON:0010227,1.75e-07,2;UBERON:0001876,2.25e-07,2;UBERON:0002702,2.40e-07,2;UBERON:0001017,9.78e-07,81 | |||
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|short_description=p@chr12:2300597..2300606,+ | |short_description=p@chr12:2300597..2300606,+ | ||
}} | }} |
Latest revision as of 07:36, 24 July 2015
Short description: | p@chr12:2300597..2300606, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2300597..2300606, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 5.85e-14 | 1 |
mature B cell | 1.28e-07 | 2 |
pre-B-II cell | 1.28e-07 | 2 |
transitional stage B cell | 1.28e-07 | 2 |
small pre-B-II cell | 1.28e-07 | 2 |
immature B cell | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.85e-14 | 1 |
lymphosarcoma | 5.85e-14 | 1 |
heart disease | 9.25e-08 | 2 |