FFCP PHASE1:Hg19::chr22:37915355..37915435,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:37915355..37915435,-
|short_description=p1@CARD10
|description=CAGE_peak_1_at_CARD10_5end
|association_with_transcript=0bp_to_uc003ast.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29775 | |EntrezGene=29775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16422 | |HGNC=16422 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003ast.1_5end | |||
|cluster_id=chr22:37915355..37915435,- | |||
|description=CAGE_peak_1_at_CARD10_5end | |||
|id=chr22:37915355..37915435,- | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-41!254;CL:0002321!1.42e-23!248;CL:0000220!1.64e-23!246;CL:0000076!1.75e-16!62;CL:0002078!5.38e-15!44;CL:0000223!2.80e-13!59;CL:0000213!5.31e-13!57;CL:0000215!5.31e-13!57;CL:0002139!8.43e-13!24;CL:0000115!1.23e-12!35;CL:0000071!1.87e-11!18;CL:0002546!1.87e-11!18;CL:0002076!4.32e-11!43;CL:0000222!8.80e-09!119;CL:1000497!3.93e-08!18;CL:0002518!3.93e-08!18;CL:1000449!2.14e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.02e-13;24!CL:0000071;4.55e-12;18!CL:0000115;8.85e-12;36!CL:0002078;2.87e-11;45!CL:1000497;9.94e-10;17!CL:0002518;9.94e-10;17!CL:0000213;4.61e-09;58!CL:0000215;4.61e-09;58!CL:1000449;6.21e-09;15!CL:0002076;6.49e-09;42!CL:0000076;2.05e-08;63!CL:0002681;1.69e-07;12!CL:0002584;1.69e-07;12!CL:1000413;5.68e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.91e-42,253;CL:0002321,5.87e-23,250;CL:0002078,1.01e-16,45;CL:0000076,2.73e-16,63;CL:0000115,3.19e-14,36;CL:0000223,4.29e-14,58;CL:0000213,4.61e-14,58;CL:0000215,4.61e-14,58;CL:0002139,1.76e-13,24;CL:0000071,4.70e-12,18;CL:0002546,4.70e-12,18;CL:0002076,1.65e-11,42;CL:1000497,8.56e-10,17;CL:0002518,8.56e-10,17;CL:1000449,5.00e-09,15;CL:0000222,1.92e-08,121;CL:0002681,1.54e-07,12;CL:0002584,1.54e-07,12;CL:1000413,6.18e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.55e-12;18!CL:0000223;2.93e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.48e-23!347;UBERON:0000119!2.07e-22!312;UBERON:0000483!2.54e-21!309;UBERON:0004119!4.52e-18!169;UBERON:0000925!4.52e-18!169;UBERON:0006595!4.52e-18!169;UBERON:0000477!1.15e-17!286;UBERON:0003104!5.48e-17!238;UBERON:0009142!5.48e-17!238;UBERON:0000467!2.83e-16!625;UBERON:0000480!3.61e-16!626;UBERON:0000468!6.36e-16!659;UBERON:0001048!2.91e-15!168;UBERON:0000922!2.47e-14!612;UBERON:0001007!4.04e-14!155;UBERON:0001555!4.04e-14!155;UBERON:0007026!4.04e-14!155;UBERON:0004111!1.39e-13!241;UBERON:0002050!1.60e-13!605;UBERON:0005423!1.60e-13!605;UBERON:0000923!3.08e-13!604;UBERON:0005291!3.08e-13!604;UBERON:0006598!3.08e-13!604;UBERON:0002532!3.08e-13!604;UBERON:0003914!3.64e-13!118;UBERON:0000064!1.36e-12!219;UBERON:0004921!2.63e-12!129;UBERON:0004185!2.63e-12!129;UBERON:0005177!3.03e-12!107;UBERON:0000475!4.78e-12!365;UBERON:0000077!1.12e-11!130;UBERON:0001986!1.87e-11!18;UBERON:0004638!1.87e-11!18;UBERON:0004852!1.87e-11!18;UBERON:0003103!9.87e-11!69;UBERON:0006914!1.46e-10!25;UBERON:0001041!3.42e-10!98;UBERON:0000062!3.53e-10!511;UBERON:0000466!9.64e-10!126;UBERON:0000487!1.05e-09!22;UBERON:0000490!4.67e-09!138;UBERON:0002100!4.74e-09!216;UBERON:0000025!6.78e-09!194;UBERON:0005172!2.05e-08!55;UBERON:0005173!2.05e-08!55;UBERON:0001004!2.11e-08!72;UBERON:0002049!2.22e-08!79;UBERON:0007798!2.22e-08!79;UBERON:0005256!2.86e-08!143;UBERON:0006555!1.89e-07!17;UBERON:0005103!1.89e-07!17;UBERON:0000083!1.89e-07!17;UBERON:0009201!1.89e-07!17;UBERON:0004819!1.89e-07!17;UBERON:0006553!1.89e-07!17;UBERON:0003074!1.89e-07!17;UBERON:0003060!1.89e-07!17;UBERON:0004211!2.14e-07!16;UBERON:0001285!2.14e-07!16;UBERON:0007684!2.14e-07!16;UBERON:0003220!2.14e-07!16;UBERON:0004208!2.14e-07!16;UBERON:0001008!2.71e-07!45;UBERON:0005085!3.52e-07!29;UBERON:0000080!3.66e-07!18;UBERON:0002120!3.66e-07!18;UBERON:0004875!3.66e-07!18;UBERON:0005721!3.66e-07!18;UBERON:0005754!3.66e-07!18;UBERON:0007297!3.66e-07!18;UBERON:0006554!4.42e-07!44;UBERON:0000464!5.20e-07!104;UBERON:0001444!7.76e-07!48;UBERON:0002365!9.41e-07!31;UBERON:0002330!9.41e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.55e-12;18!UBERON:0001986;4.55e-12;18!UBERON:0004852;4.55e-12;18!UBERON:0006914;5.71e-11;25!UBERON:0000490;1.27e-10;33!UBERON:0000487;4.96e-10;22!UBERON:0006554;2.78e-09;30!UBERON:0001008;2.78e-09;30!UBERON:0006555;6.21e-09;15!UBERON:0004819;6.21e-09;15!UBERON:0001285;6.21e-09;15!UBERON:0007684;6.21e-09;15!UBERON:0000353;2.59e-08;15!UBERON:0002113;1.63e-07;24!UBERON:0011143;1.63e-07;24!UBERON:0001225;1.69e-07;12!UBERON:0008987;1.69e-07;12!UBERON:0001851;1.72e-07;15!UBERON:0003915;5.68e-07;9!UBERON:0004700;5.68e-07;9!UBERON:0001917;5.68e-07;9 | |||
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| ||
|short_description=p1@CARD10 | |||
}} | }} |
Latest revision as of 05:15, 20 September 2015
Short description: | p1@CARD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CARD10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003ast.1_5end |
EntrezGene: | CARD10 |
HGNC: | 16422 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.91e-42 | 253 |
embryonic cell | 5.87e-23 | 250 |
meso-epithelial cell | 1.01e-16 | 45 |
squamous epithelial cell | 2.73e-16 | 63 |
endothelial cell | 3.19e-14 | 36 |
endodermal cell | 4.29e-14 | 58 |
lining cell | 4.61e-14 | 58 |
barrier cell | 4.61e-14 | 58 |
endothelial cell of vascular tree | 1.76e-13 | 24 |
blood vessel endothelial cell | 4.70e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.70e-12 | 18 |
endo-epithelial cell | 1.65e-11 | 42 |
kidney cell | 8.56e-10 | 17 |
kidney epithelial cell | 8.56e-10 | 17 |
epithelial cell of nephron | 5.00e-09 | 15 |
mesodermal cell | 1.92e-08 | 121 |
kidney cortical cell | 1.54e-07 | 12 |
renal cortical epithelial cell | 1.54e-07 | 12 |
endothelial cell of artery | 6.18e-07 | 9 |