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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005123
|accession_numbers=CAGE;DRX008076;DRR008948;DRZ000373;DRZ001758;DRZ011723;DRZ013108
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000081,CL:0000219,CL:0000738,CL:0000255,CL:0000094,CL:0000771
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000081,CL:0000219,CL:0000738,CL:0000255,CL:0000094,CL:0000771
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|created_by=
|created_by=
|creation_date=
|creation_date=
|datafreeze_phase=1
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.57!3721.48!PLEK;;chr11:47400078..47400106,-!p1@SPI1!3.05!1125.40!SPI1;;chr2:70142232..70142251,+!p1@MXD1!2.52!1732.91!MXD1;;chr10:35484053..35484076,+!p1@CREM!2.43!648.36!CREM;;chr19:45252008..45252024,+!p2@BCL3!2.32!652.31!BCL3;;chr11:47400062..47400077,-!p2@SPI1!2.32!208.21!SPI1;;chr8:22550982..22550999,-!p1@EGR3!2.28!513.94!EGR3;;chr14:35873947..35873965,-!p1@NFKBIA!2.27!10769.10!NFKBIA;;chr5:142782823..142782854,-!p3@NR3C1!2.21!225.34!NR3C1;;chr11:47399947..47399961,-!p3@SPI1!2.21!160.77!SPI1;;chr14:35872962..35873025,-!p3@NFKBIA!2.19!372.94!NFKBIA;;chr9:102584262..102584276,+!p1@NR4A3!2.18!326.82!NR4A3;;chr10:104154415..104154434,+!p5@NFKB2!2.17!146.28!NFKB2;;chr2:157189180..157189290,-!p1@NR4A2!2.13!664.17!NR4A2;;chr19:36391434..36391450,-!p1@NFKBID!2.13!254.34!NFKBID;;chr11:47400032..47400043,-!p5@SPI1!2.11!129.14!SPI1;;chr10:104155659..104155676,+!p4@NFKB2!2.10!152.87!NFKB2;;chr6:44233252..44233296,-!p1@NFKBIE!2.05!1029.21!NFKBIE;;chr6:12011943..12012015,+!p2@HIVEP1!2.04!334.72!HIVEP1;;chr19:45251395..45251432,+!p8@BCL3!2.04!108.06!BCL3;;chr10:104155480..104155534,+!p2@NFKB2!2.03!656.27!NFKB2;;chr10:104154246..104154347,+!p3@NFKB2!2.02!595.65!NFKB2;;chr16:31885093..31885165,+!p1@ZNF267!2.01!1453.54!ZNF267;;chr6:144385698..144385742,-!p2@PLAGL1!2.01!121.24!PLAGL1;;chr2:231090471..231090504,+!p2@SP140!2.01!101.47!SP140;;chr3:39195075..39195088,-!p1@CSRNP1!2.00!587.74!CSRNP1;;chr11:47399996..47400014,-!p4@SPI1!1.99!96.20!SPI1;;chr3:39195037..39195069,-!p2@CSRNP1!1.96!525.80!CSRNP1;;chr19:45250948..45250998,+!p3@BCL3!1.96!217.44!BCL3;;chr10:35484090..35484104,+!p6@CREM!1.96!90.93!CREM;;chr3:101568349..101568365,+!p1@NFKBIZ!1.94!4132.63!NFKBIZ;;chr2:68592394..68592405,+!p2@PLEK!1.94!85.66!PLEK;;chr14:75745523..75745537,+!p1@FOS!1.92!9247.03!FOS;;chr7:50344289..50344323,+!p1@IKZF1!1.92!81.70!IKZF1;;chr17:38498594..38498661,+!p2@RARA!1.91!255.65!RARA;;chr12:72056800..72056834,+!p1@THAP2!1.90!104.11!THAP2;;chr9:102584241..102584261,+!p4@NR4A3!1.89!117.28!NR4A3;;chr7:28725715..28725727,+!p3@CREB5!1.88!88.29!CREB5;;chr1:151030536..151030549,+!p8@MLLT11!1.88!75.11!MLLT11;;chr11:47400045..47400060,-!p6@SPI1!1.87!72.48!SPI1;;chr1:156470515..156470542,-!p2@MEF2D!1.86!357.12!MEF2D;;chr4:83822199..83822239,+!p2@THAP9!1.86!84.34!THAP9;;chr5:131826457..131826514,-!p1@IRF1!1.85!2552.59!IRF1;;chr19:45971246..45971265,+!p1@FOSB!1.85!1211.06!FOSB;;chr17:38497662..38497713,+!p4@RARA!1.85!80.39!RARA;;chr2:70142189..70142223,+!p2@MXD1!1.82!440.15!MXD1;;chr14:35872926..35872951,-!p4@NFKBIA!1.82!89.61!NFKBIA;;chr14:35872453..35872485,-!p2@NFKBIA!1.81!151.55!NFKBIA;;chr19:12902289..12902307,+!p1@JUNB!1.79!13080.52!JUNB;;chr4:83822246..83822277,+!p5@THAP9!1.79!60.62!THAP9;;chr9:102584128..102584144,+!p3@NR4A3!1.78!109.38!NR4A3;;chr2:231084639..231084654,-!p2@SP110!1.78!96.20!SP110;;chr2:97202480..97202499,+!p1@ARID5A!1.77!548.21!ARID5A;;chr4:106068026..106068084,+!p1@TET2!1.77!492.86!TET2;;chr2:61108808..61108821,+!p3@REL!1.77!72.48!REL;;chr1:37940170..37940190,+!p1@ZC3H12A!1.76!657.58!ZC3H12A;;chr8:123793988..123794016,+!p1@ZHX2!1.76!97.52!ZHX2;;chr10:35416142..35416169,+!p3@CREM!1.75!142.32!CREM;;chr20:56195474..56195506,-!p1@ZBP1!1.75!55.35!ZBP1;;chr2:61108695..61108753,+!p1@REL!1.74!350.54!REL;;chr2:231090433..231090469,+!p1@SP140!1.74!54.03!SP140;;chr17:38498402..38498445,+!p3@RARA!1.73!183.17!RARA;;chr2:208031943..208031978,-!p5@KLF7!1.71!65.89!KLF7;;chr2:208394817..208394834,+!p3@CREB1!1.69!187.13!CREB1;;chr9:88969339..88969422,-!p2@ZCCHC6!1.68!349.22!ZCCHC6;;chr7:149470641..149470694,-!p1@ZNF467!1.68!202.94!ZNF467;;chr19:47616992..47617011,-!p4@ZC3H4!1.67!94.88!ZC3H4;;chr17:40429090..40429125,-!p3@STAT5B!1.67!46.12!STAT5B;;chr10:51572408..51572454,+!p3@NCOA4!1.66!246.43!NCOA4;;chr2:208031542..208031595,-!p2@KLF7!1.65!295.19!KLF7;;chr4:83822343..83822355,+!p9@THAP9!1.65!43.49!THAP9;;chr4:140098339..140098392,-!p1@ELF2!1.64!333.40!ELF2;;chr3:101546827..101546847,+!p2@NFKBIZ!1.64!59.30!NFKBIZ;;chr19:16435625..16435682,+!p1@KLF2!1.63!1251.91!KLF2;;chr7:28725740..28725778,+!p1@CREB5!1.63!351.85!CREB5;;chr3:187463179..187463201,-!p2@BCL6!1.63!163.41!BCL6;;chr7:64126535..64126559,+!p2@ZNF107!1.63!86.98!ZNF107;;chr6:106534192..106534224,+!p1@PRDM1!1.62!110.70!PRDM1;;chr6:106534230..106534254,+!p2@PRDM1!1.62!100.15!PRDM1;;chr1:156470494..156470505,-!p3@MEF2D!1.62!57.98!MEF2D;;chr12:72056773..72056796,+!p3@THAP2!1.62!52.71!THAP2;;chr7:99680193..99680204,-!p2@ZNF3!1.62!40.85!ZNF3;;chr2:61108771..61108789,+!p4@REL!1.60!57.98!REL;;chr3:39195139..39195150,-!p3@CSRNP1!1.60!48.76!CSRNP1;;chr19:45251943..45252006,+!p1@BCL3!1.59!939.59!BCL3;;chr6:12012170..12012245,+!p1@HIVEP1!1.59!183.17!HIVEP1;;chr4:103423079..103423112,+!p4@NFKB1!1.58!36.90!NFKB1;;chr9:88969303..88969335,-!p1@ZCCHC6!1.57!321.54!ZCCHC6;;chr7:106809470..106809481,+!p2@HBP1!1.57!50.08!HBP1;;chr4:38665769..38665801,+!p2@KLF3!1.55!300.46!KLF3;;chr12:57914286..57914304,-!p1@DDIT3!1.54!1164.94!DDIT3;;chrX:129244454..129244488,-!p1@ELF4!1.53!229.30!ELF4;;chr2:145275162..145275202,-!p2@ZEB2!1.53!185.81!ZEB2;;chr9:117150254..117150271,-!p1@AKNA!1.53!86.98!AKNA;;chr20:48807171..48807234,+!p4@CEBPB!1.53!71.16!CEBPB;;chr14:75746340..75746368,+!p3@FOS!1.53!32.95!FOS;;chr19:21688458..21688467,+!p3@ZNF429!1.53!32.95!ZNF429;;chr9:137217986..137218049,+!p3@RXRA!1.52!89.61!RXRA;;chr20:48807351..48807384,+!p1@CEBPB!1.51!3027.00!CEBPB;;chr1:25256756..25256774,-!p1@RUNX3!1.51!57.98!RUNX3;;chr1:8484007..8484061,-!p13@RERE!1.51!39.53!RERE;;chr4:103422499..103422632,+!p1@NFKB1!1.49!598.28!NFKB1;;chr12:48298785..48298828,-!p1@VDR!1.49!151.55!VDR;;chr2:70314240..70314256,+!p4@PCBP1!1.48!59.30!PCBP1;;chr5:176735063..176735088,-!p2@MXD3!1.48!28.99!MXD3;;chr9:32550965..32551031,-!p4@TOPORS!1.47!43.49!TOPORS;;chr2:28615716..28615733,+!p1@FOSL2!1.46!1246.64!FOSL2;;chr13:41593425..41593480,-!p1@ELF1!1.46!170.00!ELF1;;chrX:106960180..106960197,-!p2@TSC22D3!1.46!102.79!TSC22D3;;chr6:15246200..15246214,+!p2@JARID2!1.46!75.11!JARID2;;chr7:44924939..44924993,-!p2@PURB!1.46!52.71!PURB;;chrX:129244430..129244442,-!p5@ELF4!1.46!27.67!ELF4;;chr19:36389839..36389857,-!p4@NFKBID!1.46!27.67!NFKBID;;chr6:143266297..143266356,-!p1@HIVEP2!1.45!126.51!HIVEP2;;chr1:247095162..247095173,-!p3@AHCTF1!1.45!40.85!AHCTF1;;chr9:127533519..127533573,-!p2@NR6A1!1.44!31.63!NR6A1;;chr6:44355499..44355514,+!p3@CDC5L!1.44!28.99!CDC5L;;chr9:102584278..102584285,+!p5@NR4A3!1.44!26.36!NR4A3;;chr19:45257891..45257908,+!p17@BCL3!1.44!26.36!BCL3;;chr11:47399920..47399931,-!p7@SPI1!1.44!26.36!SPI1;;chr16:3313791..3313834,+!p2@ZNF263!1.43!56.67!ZNF263;;chr7:50343634..50343717,+!p2@IKZF1!1.42!25.04!IKZF1;;chr22:38597987..38598021,+!p2@MAFF!1.41!146.28!MAFF;;chr12:72056749..72056767,+!p6@THAP2!1.41!27.67!THAP2;;chr2:231084659..231084721,-!p1@SP110!1.40!544.25!SP110;;chr3:170075436..170075520,+!p1@SKIL!1.39!491.54!SKIL;;chr21:30671690..30671762,+!p2@BACH1!1.39!79.07!BACH1;;chr3:150126904..150126958,+!p7@TSC22D2!1.39!40.85!TSC22D2;;chr3:18466660..18466676,-!p5@SATB1!1.39!27.67!SATB1;;chr2:157198916..157198978,-!p2@NR4A2!1.38!79.07!NR4A2;;chr6:15249128..15249177,+!p4@JARID2!1.38!40.85!JARID2;;chr8:71316021..71316068,-!p1@NCOA2!1.37!201.62!NCOA2;;chr9:94186085..94186096,-!p3@NFIL3!1.37!36.90!NFIL3;;chr5:172483414..172483425,+!p3@C5orf41!1.37!22.40!CREBRF;;chr1:154975110..154975149,+!p2@ZBTB7B!1.36!46.12!ZBTB7B;;chr11:13299319..13299424,+!p1@ARNTL!1.35!206.90!ARNTL;;chr9:102584159..102584174,+!p2@NR4A3!1.35!38.22!NR4A3;;chr6:15246261..15246312,+!p1@JARID2!1.34!483.63!JARID2;;chr21:30671235..30671253,+!p1@BACH1!1.34!255.65!BACH1;;chr14:62162258..62162269,+!p2@HIF1A!1.34!196.35!HIF1A;;chr5:172483347..172483407,+!p1@C5orf41!1.34!152.87!CREBRF;;chr12:11802753..11802834,+!p2@ETV6!1.34!100.15!ETV6;;chr14:64971288..64971316,-!p2@ZBTB25!1.34!63.25!ZBTB25;;chr2:70167296..70167306,+!p3@MXD1!1.34!31.63!MXD1;;chrY:2803415..2803468,+!p1@ZFY!1.34!21.08!ZFY;;chr17:38497715..38497734,+!p8@RARA!1.34!21.08!RARA;;chr4:83821967..83821998,+!p3@THAP9!1.33!25.04!THAP9;;chr14:62162285..62162296,+!p3@HIF1A!1.32!100.15!HIF1A;;chr21:47063625..47063658,+!p1@PCBP3!1.32!84.34!PCBP3;;chr14:69262789..69262822,-!p2@ZFP36L1!1.32!51.39!ZFP36L1;;chr14:35872494..35872511,-!p5@NFKBIA!1.32!26.36!NFKBIA;;chr7:50344251..50344288,+!p3@IKZF1!1.32!19.77!IKZF1;;chr3:113415441..113415500,-!p1@KIAA2018!1.31!102.79!KIAA2018;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.31!31.63!PCBP2;;chr20:48807430..48807439,+!p8@CEBPB!1.31!28.99!CEBPB;;chr3:5020939..5020952,+!p2@BHLHE40!1.30!57.98!BHLHE40;;chr12:48298765..48298783,-!p2@VDR!1.30!39.53!VDR;;chr14:69261310..69261326,-!p5@ZFP36L1!1.30!25.04!ZFP36L1;;chrX:106960285..106960299,-!p1@TSC22D3!1.29!486.27!TSC22D3;;chr1:247095194..247095235,-!p1@AHCTF1!1.29!189.76!AHCTF1;;chr14:58765217..58765301,+!p1@ARID4A!1.29!163.41!ARID4A;;chr19:12075844..12075880,+!p3@ZNF763!1.29!31.63!ZNF763;;chr12:54694758..54694805,-!p1@NFE2!1.29!22.40!NFE2;;chr12:57917037..57917052,+!p9@MBD6!1.29!18.45!MBD6;;chr14:75988831..75988847,+!p2@BATF!1.29!18.45!BATF;;chr2:61108878..61108891,+!p5@REL!1.29!18.45!REL;;chr8:123794038..123794056,+!p5@ZHX2!1.29!18.45!ZHX2;;chr17:40440481..40440550,+!p1@STAT5A!1.28!127.83!STAT5A;;chr1:153895251..153895342,-!p2@GATAD2B!1.28!65.89!GATAD2B;;chr4:185395191..185395226,-!p4@IRF2!1.28!25.04!IRF2;;chr10:31288398..31288455,-!p2@ZNF438!1.28!21.08!ZNF438;;chr14:62162224..62162254,+!p1@HIF1A!1.27!2478.79!HIF1A;;chr2:174828545..174828644,-!p1@SP3!1.27!262.24!SP3;;chr20:48807875..48807982,+!p2@CEBPB!1.26!368.99!CEBPB;;chr2:145277640..145277771,-!p1@ZEB2!1.26!225.34!ZEB2;;chr21:40177892..40177903,+!p2@ETS2!1.26!68.53!ETS2;;chr21:30671189..30671207,+!p4@BACH1!1.26!59.30!BACH1;;chr20:48807456..48807475,+!p3@CEBPB!1.26!32.95!CEBPB;;chr12:54694653..54694672,-!p2@NFE2!1.26!17.13!NFE2;;chr6:15246741..15246765,+!p9@JARID2!1.26!17.13!JARID2;;chr16:88636875..88636886,+!p3@ZC3H18!1.25!23.72!ZC3H18;;chr4:185395633..185395651,-!p2@IRF2!1.24!26.36!IRF2;;chr2:43453734..43453751,-!p1@ZFP36L2!1.23!1649.89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|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.57!3721.48!PLEK;;chr11:47400078..47400106,-!p1@SPI1!3.05!1125.40!SPI1;;chr2:70142232..70142251,+!p1@MXD1!2.52!1732.91!MXD1;;chr10:35484053..35484076,+!p1@CREM!2.43!648.36!CREM;;chr19:45252008..45252024,+!p2@BCL3!2.32!652.31!BCL3;;chr11:47400062..47400077,-!p2@SPI1!2.32!208.21!SPI1;;chr8:22550982..22550999,-!p1@EGR3!2.28!513.94!EGR3;;chr14:35873947..35873965,-!p1@NFKBIA!2.27!10769.10!NFKBIA;;chr5:142782823..142782854,-!p3@NR3C1!2.21!225.34!NR3C1;;chr11:47399947..47399961,-!p3@SPI1!2.21!160.77!SPI1;;chr14:35872962..35873025,-!p3@NFKBIA!2.19!372.94!NFKBIA;;chr9:102584262..102584276,+!p1@NR4A3!2.18!326.82!NR4A3;;chr10:104154415..104154434,+!p5@NFKB2!2.17!146.28!NFKB2;;chr2:157189180..157189290,-!p1@NR4A2!2.13!664.17!NR4A2;;chr19:36391434..36391450,-!p1@NFKBID!2.13!254.34!NFKBID;;chr11:47400032..47400043,-!p5@SPI1!2.11!129.14!SPI1;;chr10:104155659..104155676,+!p4@NFKB2!2.10!152.87!NFKB2;;chr6:44233252..44233296,-!p1@NFKBIE!2.05!1029.21!NFKBIE;;chr6:12011943..12012015,+!p2@HIVEP1!2.04!334.72!HIVEP1;;chr19:45251395..45251432,+!p8@BCL3!2.04!108.06!BCL3;;chr10:104155480..104155534,+!p2@NFKB2!2.03!656.27!NFKB2;;chr10:104154246..104154347,+!p3@NFKB2!2.02!595.65!NFKB2;;chr16:31885093..31885165,+!p1@ZNF267!2.01!1453.54!ZNF267;;chr6:144385698..144385742,-!p2@PLAGL1!2.01!121.24!PLAGL1;;chr2:231090471..231090504,+!p2@SP140!2.01!101.47!SP140;;chr3:39195075..39195088,-!p1@CSRNP1!2.00!587.74!CSRNP1;;chr11:47399996..47400014,-!p4@SPI1!1.99!96.20!SPI1;;chr3:39195037..39195069,-!p2@CSRNP1!1.96!525.80!CSRNP1;;chr19:45250948..45250998,+!p3@BCL3!1.96!217.44!BCL3;;chr10:35484090..35484104,+!p6@CREM!1.96!90.93!CREM;;chr3:101568349..101568365,+!p1@NFKBIZ!1.94!4132.63!NFKBIZ;;chr2:68592394..68592405,+!p2@PLEK!1.94!85.66!PLEK;;chr14:75745523..75745537,+!p1@FOS!1.92!9247.03!FOS;;chr7:50344289..50344323,+!p1@IKZF1!1.92!81.70!IKZF1;;chr17:38498594..38498661,+!p2@RARA!1.91!255.65!RARA;;chr12:72056800..72056834,+!p1@THAP2!1.90!104.11!THAP2;;chr9:102584241..102584261,+!p4@NR4A3!1.89!117.28!NR4A3;;chr7:28725715..28725727,+!p3@CREB5!1.88!88.29!CREB5;;chr1:151030536..151030549,+!p8@MLLT11!1.88!75.11!MLLT11;;chr11:47400045..47400060,-!p6@SPI1!1.87!72.48!SPI1;;chr1:156470515..156470542,-!p2@MEF2D!1.86!357.12!MEF2D;;chr4:83822199..83822239,+!p2@THAP9!1.86!84.34!THAP9;;chr5:131826457..131826514,-!p1@IRF1!1.85!2552.59!IRF1;;chr19:45971246..45971265,+!p1@FOSB!1.85!1211.06!FOSB;;chr17:38497662..38497713,+!p4@RARA!1.85!80.39!RARA;;chr2:70142189..70142223,+!p2@MXD1!1.82!440.15!MXD1;;chr14:35872926..35872951,-!p4@NFKBIA!1.82!89.61!NFKBIA;;chr14:35872453..35872485,-!p2@NFKBIA!1.81!151.55!NFKBIA;;chr19:12902289..12902307,+!p1@JUNB!1.79!13080.52!JUNB;;chr4:83822246..83822277,+!p5@THAP9!1.79!60.62!THAP9;;chr9:102584128..102584144,+!p3@NR4A3!1.78!109.38!NR4A3;;chr2:231084639..231084654,-!p2@SP110!1.78!96.20!SP110;;chr2:97202480..97202499,+!p1@ARID5A!1.77!548.21!ARID5A;;chr4:106068026..106068084,+!p1@TET2!1.77!492.86!TET2;;chr2:61108808..61108821,+!p3@REL!1.77!72.48!REL;;chr1:37940170..37940190,+!p1@ZC3H12A!1.76!657.58!ZC3H12A;;chr8:123793988..123794016,+!p1@ZHX2!1.76!97.52!ZHX2;;chr10:35416142..35416169,+!p3@CREM!1.75!142.32!CREM;;chr20:56195474..56195506,-!p1@ZBP1!1.75!55.35!ZBP1;;chr2:61108695..61108753,+!p1@REL!1.74!350.54!REL;;chr2:231090433..231090469,+!p1@SP140!1.74!54.03!SP140;;chr17:38498402..38498445,+!p3@RARA!1.73!183.17!RARA;;chr2:208031943..208031978,-!p5@KLF7!1.71!65.89!KLF7;;chr2:208394817..208394834,+!p3@CREB1!1.69!187.13!CREB1;;chr9:88969339..88969422,-!p2@ZCCHC6!1.68!349.22!ZCCHC6;;chr7:149470641..149470694,-!p1@ZNF467!1.68!202.94!ZNF467;;chr19:47616992..47617011,-!p4@ZC3H4!1.67!94.88!ZC3H4;;chr17:40429090..40429125,-!p3@STAT5B!1.67!46.12!STAT5B;;chr10:51572408..51572454,+!p3@NCOA4!1.66!246.43!NCOA4;;chr2:208031542..208031595,-!p2@KLF7!1.65!295.19!KLF7;;chr4:83822343..83822355,+!p9@THAP9!1.65!43.49!THAP9;;chr4:140098339..140098392,-!p1@ELF2!1.64!333.40!ELF2;;chr3:101546827..101546847,+!p2@NFKBIZ!1.64!59.30!NFKBIZ;;chr19:16435625..16435682,+!p1@KLF2!1.63!1251.91!KLF2;;chr7:28725740..28725778,+!p1@CREB5!1.63!351.85!CREB5;;chr3:187463179..187463201,-!p2@BCL6!1.63!163.41!BCL6;;chr7:64126535..64126559,+!p2@ZNF107!1.63!86.98!ZNF107;;chr6:106534192..106534224,+!p1@PRDM1!1.62!110.70!PRDM1;;chr6:106534230..106534254,+!p2@PRDM1!1.62!100.15!PRDM1;;chr1:156470494..156470505,-!p3@MEF2D!1.62!57.98!MEF2D;;chr12:72056773..72056796,+!p3@THAP2!1.62!52.71!THAP2;;chr7:99680193..99680204,-!p2@ZNF3!1.62!40.85!ZNF3;;chr2:61108771..61108789,+!p4@REL!1.60!57.98!REL;;chr3:39195139..39195150,-!p3@CSRNP1!1.60!48.76!CSRNP1;;chr19:45251943..45252006,+!p1@BCL3!1.59!939.59!BCL3;;chr6:12012170..12012245,+!p1@HIVEP1!1.59!183.17!HIVEP1;;chr4:103423079..103423112,+!p4@NFKB1!1.58!36.90!NFKB1;;chr9:88969303..88969335,-!p1@ZCCHC6!1.57!321.54!ZCCHC6;;chr7:106809470..106809481,+!p2@HBP1!1.57!50.08!HBP1;;chr4:38665769..38665801,+!p2@KLF3!1.55!300.46!KLF3;;chr12:57914286..57914304,-!p1@DDIT3!1.54!1164.94!DDIT3;;chrX:129244454..129244488,-!p1@ELF4!1.53!229.30!ELF4;;chr2:145275162..145275202,-!p2@ZEB2!1.53!185.81!ZEB2;;chr9:117150254..117150271,-!p1@AKNA!1.53!86.98!AKNA;;chr20:48807171..48807234,+!p4@CEBPB!1.53!71.16!CEBPB;;chr14:75746340..75746368,+!p3@FOS!1.53!32.95!FOS;;chr19:21688458..21688467,+!p3@ZNF429!1.53!32.95!ZNF429;;chr9:137217986..137218049,+!p3@RXRA!1.52!89.61!RXRA;;chr20:48807351..48807384,+!p1@CEBPB!1.51!3027.00!CEBPB;;chr1:25256756..25256774,-!p1@RUNX3!1.51!57.98!RUNX3;;chr1:8484007..8484061,-!p13@RERE!1.51!39.53!RERE;;chr4:103422499..103422632,+!p1@NFKB1!1.49!598.28!NFKB1;;chr12:48298785..48298828,-!p1@VDR!1.49!151.55!VDR;;chr2:70314240..70314256,+!p4@PCBP1!1.48!59.30!PCBP1;;chr5:176735063..176735088,-!p2@MXD3!1.48!28.99!MXD3;;chr9:32550965..32551031,-!p4@TOPORS!1.47!43.49!TOPORS;;chr2:28615716..28615733,+!p1@FOSL2!1.46!1246.64!FOSL2;;chr13:41593425..41593480,-!p1@ELF1!1.46!170.00!ELF1;;chrX:106960180..106960197,-!p2@TSC22D3!1.46!102.79!TSC22D3;;chr6:15246200..15246214,+!p2@JARID2!1.46!75.11!JARID2;;chr7:44924939..44924993,-!p2@PURB!1.46!52.71!PURB;;chrX:129244430..129244442,-!p5@ELF4!1.46!27.67!ELF4;;chr19:36389839..36389857,-!p4@NFKBID!1.46!27.67!NFKBID;;chr6:143266297..143266356,-!p1@HIVEP2!1.45!126.51!HIVEP2;;chr1:247095162..247095173,-!p3@AHCTF1!1.45!40.85!AHCTF1;;chr9:127533519..127533573,-!p2@NR6A1!1.44!31.63!NR6A1;;chr6:44355499..44355514,+!p3@CDC5L!1.44!28.99!CDC5L;;chr9:102584278..102584285,+!p5@NR4A3!1.44!26.36!NR4A3;;chr19:45257891..45257908,+!p17@BCL3!1.44!26.36!BCL3;;chr11:47399920..47399931,-!p7@SPI1!1.44!26.36!SPI1;;chr16:3313791..3313834,+!p2@ZNF263!1.43!56.67!ZNF263;;chr7:50343634..50343717,+!p2@IKZF1!1.42!25.04!IKZF1;;chr22:38597987..38598021,+!p2@MAFF!1.41!146.28!MAFF;;chr12:72056749..72056767,+!p6@THAP2!1.41!27.67!THAP2;;chr2:231084659..231084721,-!p1@SP110!1.40!544.25!SP110;;chr3:170075436..170075520,+!p1@SKIL!1.39!491.54!SKIL;;chr21:30671690..30671762,+!p2@BACH1!1.39!79.07!BACH1;;chr3:150126904..150126958,+!p7@TSC22D2!1.39!40.85!TSC22D2;;chr3:18466660..18466676,-!p5@SATB1!1.39!27.67!SATB1;;chr2:157198916..157198978,-!p2@NR4A2!1.38!79.07!NR4A2;;chr6:15249128..15249177,+!p4@JARID2!1.38!40.85!JARID2;;chr8:71316021..71316068,-!p1@NCOA2!1.37!201.62!NCOA2;;chr9:94186085..94186096,-!p3@NFIL3!1.37!36.90!NFIL3;;chr5:172483414..172483425,+!p3@C5orf41!1.37!22.40!CREBRF;;chr1:154975110..154975149,+!p2@ZBTB7B!1.36!46.12!ZBTB7B;;chr11:13299319..13299424,+!p1@ARNTL!1.35!206.90!ARNTL;;chr9:102584159..102584174,+!p2@NR4A3!1.35!38.22!NR4A3;;chr6:15246261..15246312,+!p1@JARID2!1.34!483.63!JARID2;;chr21:30671235..30671253,+!p1@BACH1!1.34!255.65!BACH1;;chr14:62162258..62162269,+!p2@HIF1A!1.34!196.35!HIF1A;;chr5:172483347..172483407,+!p1@C5orf41!1.34!152.87!CREBRF;;chr12:11802753..11802834,+!p2@ETV6!1.34!100.15!ETV6;;chr14:64971288..64971316,-!p2@ZBTB25!1.34!63.25!ZBTB25;;chr2:70167296..70167306,+!p3@MXD1!1.34!31.63!MXD1;;chrY:2803415..2803468,+!p1@ZFY!1.34!21.08!ZFY;;chr17:38497715..38497734,+!p8@RARA!1.34!21.08!RARA;;chr4:83821967..83821998,+!p3@THAP9!1.33!25.04!THAP9;;chr14:62162285..62162296,+!p3@HIF1A!1.32!100.15!HIF1A;;chr21:47063625..47063658,+!p1@PCBP3!1.32!84.34!PCBP3;;chr14:69262789..69262822,-!p2@ZFP36L1!1.32!51.39!ZFP36L1;;chr14:35872494..35872511,-!p5@NFKBIA!1.32!26.36!NFKBIA;;chr7:50344251..50344288,+!p3@IKZF1!1.32!19.77!IKZF1;;chr3:113415441..113415500,-!p1@KIAA2018!1.31!102.79!KIAA2018;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.31!31.63!PCBP2;;chr20:48807430..48807439,+!p8@CEBPB!1.31!28.99!CEBPB;;chr3:5020939..5020952,+!p2@BHLHE40!1.30!57.98!BHLHE40;;chr12:48298765..48298783,-!p2@VDR!1.30!39.53!VDR;;chr14:69261310..69261326,-!p5@ZFP36L1!1.30!25.04!ZFP36L1;;chrX:106960285..106960299,-!p1@TSC22D3!1.29!486.27!TSC22D3;;chr1:247095194..247095235,-!p1@AHCTF1!1.29!189.76!AHCTF1;;chr14:58765217..58765301,+!p1@ARID4A!1.29!163.41!ARID4A;;chr19:12075844..12075880,+!p3@ZNF763!1.29!31.63!ZNF763;;chr12:54694758..54694805,-!p1@NFE2!1.29!22.40!NFE2;;chr12:57917037..57917052,+!p9@MBD6!1.29!18.45!MBD6;;chr14:75988831..75988847,+!p2@BATF!1.29!18.45!BATF;;chr2:61108878..61108891,+!p5@REL!1.29!18.45!REL;;chr8:123794038..123794056,+!p5@ZHX2!1.29!18.45!ZHX2;;chr17:40440481..40440550,+!p1@STAT5A!1.28!127.83!STAT5A;;chr1:153895251..153895342,-!p2@GATAD2B!1.28!65.89!GATAD2B;;chr4:185395191..185395226,-!p4@IRF2!1.28!25.04!IRF2;;chr10:31288398..31288455,-!p2@ZNF438!1.28!21.08!ZNF438;;chr14:62162224..62162254,+!p1@HIF1A!1.27!2478.79!HIF1A;;chr2:174828545..174828644,-!p1@SP3!1.27!262.24!SP3;;chr20:48807875..48807982,+!p2@CEBPB!1.26!368.99!CEBPB;;chr2:145277640..145277771,-!p1@ZEB2!1.26!225.34!ZEB2;;chr21:40177892..40177903,+!p2@ETS2!1.26!68.53!ETS2;;chr21:30671189..30671207,+!p4@BACH1!1.26!59.30!BACH1;;chr20:48807456..48807475,+!p3@CEBPB!1.26!32.95!CEBPB;;chr12:54694653..54694672,-!p2@NFE2!1.26!17.13!NFE2;;chr6:15246741..15246765,+!p9@JARID2!1.26!17.13!JARID2;;chr16:88636875..88636886,+!p3@ZC3H18!1.25!23.72!ZC3H18;;chr4:185395633..185395651,-!p2@IRF2!1.24!26.36!IRF2;;chr2:43453734..43453751,-!p1@ZFP36L2!1.23!1649.89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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000094;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000771;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|ffid_belonging_in_development=CL:0000049,CL:0000134
|ffid_belonging_in_development=CL:0000049,CL:0000134
|fonse_cell_line=
|fonse_cell_line=
Line 38: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Eosinophils%252c%2520donor2.CNhs12548.12245-129H4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Eosinophils%252c%2520donor2.CNhs12548.12245-129H4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Eosinophils%252c%2520donor2.CNhs12548.12245-129H4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Eosinophils%252c%2520donor2.CNhs12548.12245-129H4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Eosinophils%252c%2520donor2.CNhs12548.12245-129H4.hg38.nobarcode.ctss.bed.gz
|id=FF:12245-129H4
|id=FF:12245-129H4
|is_a=EFO:0002091;;FF:0000249
|is_a=EFO:0002091;;FF:0000249
|is_obsolete=
|is_obsolete=
|library_id=CNhs12548
|library_id_phase_based=2:CNhs12548
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12245
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12245
|name=Eosinophils, donor2
|name=Eosinophils, donor2
|namespace=FANTOM5
|namespace=FANTOM5
Line 46: Line 61:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs12548,LSID920,release011,COMPLETED
|profile_hcage=CNhs12548,LSID920,release011,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|sample_cell_line=
Line 84: Line 101:
|top_motifs=ATF5_CREB3:5.21642831133;CEBPA,B_DDIT3:4.97601968942;NFKB1_REL_RELA:4.81729580813;SPI1:4.68279728668;SPIB:4.24344531809;FOXN1:4.20609396403;ATF4:4.08081897615;ETS1,2:4.02503325908;CREB1:3.72114701483;HLF:3.68803427053;PAX2:3.51844273769;RUNX1..3:3.46564316195;FOXP3:3.33852273058;JUN:3.26925132492;FOX{D1,D2}:3.24121905202;ATF6:3.14821516592;FOX{F1,F2,J1}:3.12505460323;NFE2L2:2.95872448881;ELF1,2,4:2.87414727578;PPARG:2.8189887082;NFIL3:2.80006550012;DMAP1_NCOR{1,2}_SMARC:2.77243741058;MAFB:2.74951607119;BPTF:2.66443427531;NANOG{mouse}:2.60772903571;EP300:2.56042062882;HBP1_HMGB_SSRP1_UBTF:2.55123473359;RXRA_VDR{dimer}:2.41957244449;NFE2:2.38675262313;STAT2,4,6:2.30863476679;FOXO1,3,4:2.27762322576;SREBF1,2:2.25653453219;FOSL2:2.2346447691;ESRRA:2.20175195246;HIF1A:2.14477546194;TGIF1:2.13040533978;PAX3,7:2.05691002892;ALX4:2.02317609977;FOXA2:1.90947105295;NFE2L1:1.88186995169;XBP1:1.84790976909;NFATC1..3:1.80710525719;IRF7:1.77537025686;BACH2:1.76484459856;RORA:1.71724680297;NR1H4:1.67483642446;IRF1,2:1.65926854184;ATF2:1.61207673043;RFX2..5_RFXANK_RFXAP:1.40768926431;RXR{A,B,G}:1.38811115935;SRF:1.25618183522;STAT1,3:1.2331078372;FOS_FOS{B,L1}_JUN{B,D}:1.2285615398;NR5A1,2:1.21646725211;PAX8:1.18116717466;SMAD1..7,9:1.14741634674;TFCP2:0.981425799933;GATA4:0.840169363337;RBPJ:0.826666289515;ALX1:0.787578861762;MYB:0.682022896292;T:0.618661976403;HMGA1,2:0.568324148436;TBX4,5:0.553795670814;EGR1..3:0.45888061144;NKX2-1,4:0.384919195027;POU5F1:0.381697537368;HMX1:0.216422826225;MYFfamily:0.209770005098;POU2F1..3:0.190758918048;MAZ:0.144238715222;TAL1_TCF{3,4,12}:0.105074847284;NFIX:0.0969757159759;GATA6:0.0904494636691;TLX2:0.0492375762061;ZNF423:0.0245508390191;MZF1:0.0244744658759;RFX1:-0.0199070427271;NR3C1:-0.0230566675847;IKZF1:-0.10509517836;SOX2:-0.121912785041;PATZ1:-0.12570011087;ZNF148:-0.127164058229;SP1:-0.258151181489;RREB1:-0.265061395224;EN1,2:-0.274459285953;BREu{core}:-0.293630822817;FOX{I1,J2}:-0.35383297107;TFAP2{A,C}:-0.381105710105;MYOD1:-0.382589803727;SPZ1:-0.383668021442;HOXA9_MEIS1:-0.409311244963;ESR1:-0.454648114332;ZEB1:-0.466869102189;EBF1:-0.512100011131;LEF1_TCF7_TCF7L1,2:-0.593348039353;ELK1,4_GABP{A,B1}:-0.629577412381;MTE{core}:-0.667634836939;ZBTB16:-0.667886091807;HSF1,2:-0.68344182524;PDX1:-0.686493711235;NKX3-2:-0.690380619693;ZNF238:-0.753654079271;TFAP4:-0.831778167443;HNF1A:-0.866671416067;STAT5{A,B}:-0.869875954481;CUX2:-0.878623572068;NKX3-1:-0.882782644178;TFAP2B:-0.886055977544;CDX1,2,4:-0.88882794764;HNF4A_NR2F1,2:-0.895243247382;MEF2{A,B,C,D}:-0.95208463315;LMO2:-0.973616697042;HOX{A5,B5}:-1.00030020856;ADNP_IRX_SIX_ZHX:-1.00950256212;SNAI1..3:-1.01345534513;REST:-1.01450933719;FOXL1:-1.04624825824;GTF2I:-1.05538664647;IKZF2:-1.07150646731;EVI1:-1.07656629481;ZFP161:-1.07859732965;MED-1{core}:-1.08357754681;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.10046234058;GLI1..3:-1.15532162429;PRRX1,2:-1.19618696052;FOXP1:-1.23664740765;PRDM1:-1.24903918802;ZIC1..3:-1.26487067347;PITX1..3:-1.28437466887;PAX5:-1.29414440726;TFDP1:-1.30974651773;NHLH1,2:-1.31452483353;NR6A1:-1.36653991743;AHR_ARNT_ARNT2:-1.36819415695;CRX:-1.39461734898;PAX1,9:-1.41529759816;FOXQ1:-1.41627099227;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.45155215735;TLX1..3_NFIC{dimer}:-1.48907920113;SOX{8,9,10}:-1.52160653323;VSX1,2:-1.53660646097;HIC1:-1.57050225215;KLF4:-1.57206733389;AR:-1.5849249796;TBP:-1.61584592281;TP53:-1.66371917696;NANOG:-1.66692063518;HES1:-1.68523896042;NFY{A,B,C}:-1.70584514755;FOXD3:-1.75074102529;E2F1..5:-1.81191728863;TEAD1:-1.86295850734;OCT4_SOX2{dimer}:-1.87274023094;MTF1:-1.96487785285;ZBTB6:-2.06809789225;POU6F1:-2.15850843584;SOX5:-2.16696180258;TOPORS:-2.20340973527;GCM1,2:-2.21724351238;FOXM1:-2.29869515922;PBX1:-2.32754251097;XCPE1{core}:-2.39670595206;DBP:-2.43653463451;MYBL2:-2.50470015359;SOX17:-2.52163210907;NKX2-3_NKX2-5:-2.59700366398;GTF2A1,2:-2.69513804628;HOX{A4,D4}:-2.69741490486;UFEwm:-2.75900407561;PAX6:-2.76794620201;GFI1:-2.79387181822;NKX2-2,8:-2.80525210391;PAX4:-2.9551845754;NRF1:-2.978606695;GFI1B:-2.9913539151;CDC5L:-3.04085324591;TEF:-3.04501935209;ZNF384:-3.04779184261;ONECUT1,2:-3.08573422095;GZF1:-3.1309955726;HAND1,2:-3.2381906703;HOX{A6,A7,B6,B7}:-3.35440629666;AIRE:-3.36158098253;LHX3,4:-3.44357799974;NKX6-1,2:-3.49672346268;YY1:-3.70066852099;POU3F1..4:-3.76491003702;ZNF143:-3.81361400236;bHLH_family:-3.8410022111;ARID5B:-4.17203587095;POU1F1:-4.58134419159
|top_motifs=ATF5_CREB3:5.21642831133;CEBPA,B_DDIT3:4.97601968942;NFKB1_REL_RELA:4.81729580813;SPI1:4.68279728668;SPIB:4.24344531809;FOXN1:4.20609396403;ATF4:4.08081897615;ETS1,2:4.02503325908;CREB1:3.72114701483;HLF:3.68803427053;PAX2:3.51844273769;RUNX1..3:3.46564316195;FOXP3:3.33852273058;JUN:3.26925132492;FOX{D1,D2}:3.24121905202;ATF6:3.14821516592;FOX{F1,F2,J1}:3.12505460323;NFE2L2:2.95872448881;ELF1,2,4:2.87414727578;PPARG:2.8189887082;NFIL3:2.80006550012;DMAP1_NCOR{1,2}_SMARC:2.77243741058;MAFB:2.74951607119;BPTF:2.66443427531;NANOG{mouse}:2.60772903571;EP300:2.56042062882;HBP1_HMGB_SSRP1_UBTF:2.55123473359;RXRA_VDR{dimer}:2.41957244449;NFE2:2.38675262313;STAT2,4,6:2.30863476679;FOXO1,3,4:2.27762322576;SREBF1,2:2.25653453219;FOSL2:2.2346447691;ESRRA:2.20175195246;HIF1A:2.14477546194;TGIF1:2.13040533978;PAX3,7:2.05691002892;ALX4:2.02317609977;FOXA2:1.90947105295;NFE2L1:1.88186995169;XBP1:1.84790976909;NFATC1..3:1.80710525719;IRF7:1.77537025686;BACH2:1.76484459856;RORA:1.71724680297;NR1H4:1.67483642446;IRF1,2:1.65926854184;ATF2:1.61207673043;RFX2..5_RFXANK_RFXAP:1.40768926431;RXR{A,B,G}:1.38811115935;SRF:1.25618183522;STAT1,3:1.2331078372;FOS_FOS{B,L1}_JUN{B,D}:1.2285615398;NR5A1,2:1.21646725211;PAX8:1.18116717466;SMAD1..7,9:1.14741634674;TFCP2:0.981425799933;GATA4:0.840169363337;RBPJ:0.826666289515;ALX1:0.787578861762;MYB:0.682022896292;T:0.618661976403;HMGA1,2:0.568324148436;TBX4,5:0.553795670814;EGR1..3:0.45888061144;NKX2-1,4:0.384919195027;POU5F1:0.381697537368;HMX1:0.216422826225;MYFfamily:0.209770005098;POU2F1..3:0.190758918048;MAZ:0.144238715222;TAL1_TCF{3,4,12}:0.105074847284;NFIX:0.0969757159759;GATA6:0.0904494636691;TLX2:0.0492375762061;ZNF423:0.0245508390191;MZF1:0.0244744658759;RFX1:-0.0199070427271;NR3C1:-0.0230566675847;IKZF1:-0.10509517836;SOX2:-0.121912785041;PATZ1:-0.12570011087;ZNF148:-0.127164058229;SP1:-0.258151181489;RREB1:-0.265061395224;EN1,2:-0.274459285953;BREu{core}:-0.293630822817;FOX{I1,J2}:-0.35383297107;TFAP2{A,C}:-0.381105710105;MYOD1:-0.382589803727;SPZ1:-0.383668021442;HOXA9_MEIS1:-0.409311244963;ESR1:-0.454648114332;ZEB1:-0.466869102189;EBF1:-0.512100011131;LEF1_TCF7_TCF7L1,2:-0.593348039353;ELK1,4_GABP{A,B1}:-0.629577412381;MTE{core}:-0.667634836939;ZBTB16:-0.667886091807;HSF1,2:-0.68344182524;PDX1:-0.686493711235;NKX3-2:-0.690380619693;ZNF238:-0.753654079271;TFAP4:-0.831778167443;HNF1A:-0.866671416067;STAT5{A,B}:-0.869875954481;CUX2:-0.878623572068;NKX3-1:-0.882782644178;TFAP2B:-0.886055977544;CDX1,2,4:-0.88882794764;HNF4A_NR2F1,2:-0.895243247382;MEF2{A,B,C,D}:-0.95208463315;LMO2:-0.973616697042;HOX{A5,B5}:-1.00030020856;ADNP_IRX_SIX_ZHX:-1.00950256212;SNAI1..3:-1.01345534513;REST:-1.01450933719;FOXL1:-1.04624825824;GTF2I:-1.05538664647;IKZF2:-1.07150646731;EVI1:-1.07656629481;ZFP161:-1.07859732965;MED-1{core}:-1.08357754681;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.10046234058;GLI1..3:-1.15532162429;PRRX1,2:-1.19618696052;FOXP1:-1.23664740765;PRDM1:-1.24903918802;ZIC1..3:-1.26487067347;PITX1..3:-1.28437466887;PAX5:-1.29414440726;TFDP1:-1.30974651773;NHLH1,2:-1.31452483353;NR6A1:-1.36653991743;AHR_ARNT_ARNT2:-1.36819415695;CRX:-1.39461734898;PAX1,9:-1.41529759816;FOXQ1:-1.41627099227;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.45155215735;TLX1..3_NFIC{dimer}:-1.48907920113;SOX{8,9,10}:-1.52160653323;VSX1,2:-1.53660646097;HIC1:-1.57050225215;KLF4:-1.57206733389;AR:-1.5849249796;TBP:-1.61584592281;TP53:-1.66371917696;NANOG:-1.66692063518;HES1:-1.68523896042;NFY{A,B,C}:-1.70584514755;FOXD3:-1.75074102529;E2F1..5:-1.81191728863;TEAD1:-1.86295850734;OCT4_SOX2{dimer}:-1.87274023094;MTF1:-1.96487785285;ZBTB6:-2.06809789225;POU6F1:-2.15850843584;SOX5:-2.16696180258;TOPORS:-2.20340973527;GCM1,2:-2.21724351238;FOXM1:-2.29869515922;PBX1:-2.32754251097;XCPE1{core}:-2.39670595206;DBP:-2.43653463451;MYBL2:-2.50470015359;SOX17:-2.52163210907;NKX2-3_NKX2-5:-2.59700366398;GTF2A1,2:-2.69513804628;HOX{A4,D4}:-2.69741490486;UFEwm:-2.75900407561;PAX6:-2.76794620201;GFI1:-2.79387181822;NKX2-2,8:-2.80525210391;PAX4:-2.9551845754;NRF1:-2.978606695;GFI1B:-2.9913539151;CDC5L:-3.04085324591;TEF:-3.04501935209;ZNF384:-3.04779184261;ONECUT1,2:-3.08573422095;GZF1:-3.1309955726;HAND1,2:-3.2381906703;HOX{A6,A7,B6,B7}:-3.35440629666;AIRE:-3.36158098253;LHX3,4:-3.44357799974;NKX6-1,2:-3.49672346268;YY1:-3.70066852099;POU3F1..4:-3.76491003702;ZNF143:-3.81361400236;bHLH_family:-3.8410022111;ARID5B:-4.17203587095;POU1F1:-4.58134419159
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12245-129H4;search_select_hide=table117:FF:12245-129H4
}}
}}

Latest revision as of 18:36, 4 June 2020

Name:Eosinophils, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12548
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeeosinophil
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog number3H100-90-5
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005123
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12548 CAGE DRX008076 DRR008948
Accession ID Hg19

Library idBAMCTSS
CNhs12548 DRZ000373 DRZ001758
Accession ID Hg38

Library idBAMCTSS
CNhs12548 DRZ011723 DRZ013108
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.216
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.365
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.471
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.365
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.365
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.365
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.365
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural1.168
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.959
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.573
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.365
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast1.344
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.214
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.561
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.375
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.834
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory1.378
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.718
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole1.049
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.639
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.365
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0663
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.561
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.581
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.681
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.739
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.365
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.561
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral1.13
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood1.19
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.816
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.95
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12548

Jaspar motifP-value
MA0002.23.52665e-12
MA0003.10.191
MA0004.10.858
MA0006.10.53
MA0007.10.454
MA0009.10.0783
MA0014.10.954
MA0017.10.0863
MA0018.22.90801e-7
MA0019.10.915
MA0024.10.00351
MA0025.15.62352e-7
MA0027.10.79
MA0028.10.928
MA0029.10.822
MA0030.11.41453e-5
MA0031.17.10233e-4
MA0035.20.919
MA0038.10.2
MA0039.20.781
MA0040.10.00296
MA0041.10.258
MA0042.10.0369
MA0043.11.17357e-15
MA0046.10.136
MA0047.20.0355
MA0048.10.706
MA0050.14.0852e-4
MA0051.10.08
MA0052.10.797
MA0055.10.233
MA0057.10.225
MA0058.10.599
MA0059.10.915
MA0060.12.08368e-4
MA0061.11.25687e-16
MA0062.23.49697e-5
MA0065.20.0384
MA0066.10.0387
MA0067.12.86593e-5
MA0068.10.468
MA0069.10.322
MA0070.10.0515
MA0071.10.13
MA0072.10.682
MA0073.10.122
MA0074.10.27
MA0076.10.524
MA0077.10.375
MA0078.10.454
MA0079.20.866
MA0080.21.62291e-15
MA0081.12.62295e-5
MA0083.10.0546
MA0084.10.491
MA0087.10.601
MA0088.10.162
MA0090.10.131
MA0091.10.94
MA0092.10.901
MA0093.10.916
MA0099.23.35817e-16
MA0100.10.941
MA0101.15.39674e-18
MA0102.21.95285e-13
MA0103.10.793
MA0104.20.655
MA0105.12.94427e-14
MA0106.10.218
MA0107.15.64406e-24
MA0108.20.0765
MA0111.10.828
MA0112.20.00459
MA0113.10.722
MA0114.10.427
MA0115.10.738
MA0116.10.00293
MA0117.10.0141
MA0119.10.89
MA0122.10.391
MA0124.10.764
MA0125.10.169
MA0131.10.82
MA0135.10.0504
MA0136.14.61315e-20
MA0137.20.049
MA0138.20.212
MA0139.10.976
MA0140.10.629
MA0141.10.0455
MA0142.10.676
MA0143.10.867
MA0144.10.0481
MA0145.10.224
MA0146.10.156
MA0147.10.51
MA0148.10.156
MA0149.10.84
MA0150.14.34929e-14
MA0152.10.0885
MA0153.10.11
MA0154.16.40618e-4
MA0155.10.426
MA0156.11.35154e-14
MA0157.10.0246
MA0159.10.0253
MA0160.10.00713
MA0162.10.924
MA0163.10.00355
MA0164.10.936
MA0258.10.0617
MA0259.10.318



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12548

Novel motifP-value
10.245
100.0925
1000.476
1010.86
1020.945
1030.286
1040.533
1050.252
1064.6952e-4
1070.748
1080.43
1090.203
110.262
1100.596
1110.383
1120.393
1130.515
1140.0523
1150.375
1160.633
1170.0208
1180.112
1190.443
120.264
1200.568
1210.836
1220.493
1230.464
1240.867
1250.166
1260.0926
1270.458
1280.0309
1290.619
130.286
1300.889
1310.575
1320.0785
1330.949
1340.583
1350.199
1360.697
1377.04679e-4
1380.181
1390.0955
140.347
1400.639
1410.286
1420.594
1430.0185
1440.95
1450.779
1460.413
1470.656
1480.169
1490.643
150.123
1500.732
1510.254
1520.146
1530.781
1541
1550.145
1560.899
1570.976
1580.00467
1590.412
160.582
1600.926
1610.734
1620.0582
1630.351
1640.212
1650.301
1660.722
1670.817
1680.182
1690.0863
170.303
180.174
190.541
20.93
200.539
210.964
220.162
230.0206
240.379
250.314
260.156
270.894
280.351
290.386
30.324
300.666
310.897
320.307
330.333
340.569
350.139
360.228
370.103
380.513
390.795
40.824
400.311
410.00333
420.581
430.0625
440.93
450.42
460.386
470.641
480.734
490.133
50.142
500.956
510.398
520.298
530.389
540.345
550.949
560.792
570.532
580.223
590.0816
60.842
600.0408
610.299
620.0934
630.677
640.599
650.233
660.291
670.491
680.339
690.519
70.26
700.22
710.0425
720.452
730.191
740.0944
750.256
760.191
770.665
780.245
790.922
80.653
800.0284
810.428
820.106
830.132
840.439
850.0746
860.021
870.319
880.696
890.127
90.218
900.316
910.486
920.398
930.064
940.0661
950.208
960.503
970.928
980.122
990.0134



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12548


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000081 (blood cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000094 (granulocyte)
0000771 (eosinophil)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000054 (human eosinophil sample)
0000249 (human eosinophil- heparinase treated sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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