FFCP PHASE1:Mm9::chr3:26230422..26230436,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192167 | |EntrezGene=192167 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q99K10 | |UniProt=Q99K10 | ||
|association_with_transcript=394bp_to_NM_138666,uc008otc.1,uc008otd.1_5end | |association_with_transcript=394bp_to_NM_138666,uc008otc.1,uc008otd.1_5end | ||
|cluster_id=chr3:26230422..26230436,- | |||
|description=CAGE_peak_3_at_Nlgn1_5end | |description=CAGE_peak_3_at_Nlgn1_5end | ||
|id=chr3:26230422..26230436,- | |id=chr3:26230422..26230436,- | ||
|ontology_enrichment_celltype=CL:0000117!3.00e-11!23;CL:0000337!3.00e-11!23;CL:0000540!8.06e-07!33;CL:0000047!8.06e-07!33;CL:0000031!8.06e-07!33;CL:0000404!8.06e-07!33 | |ontology_enrichment_celltype=CL:0000117!3.00e-11!23;CL:0000337!3.00e-11!23;CL:0000540!8.06e-07!33;CL:0000047!8.06e-07!33;CL:0000031!8.06e-07!33;CL:0000404!8.06e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.85e-12,23;CL:0000337,9.85e-12,23;CL:0000540,2.44e-07,33;CL:0000047,2.44e-07,33;CL:0000031,2.44e-07,33;CL:0000404,2.44e-07,33;CL:0002610,6.14e-07,3;CL:0002614,8.94e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.26e-22!63;UBERON:0001049!5.68e-22!52;UBERON:0005068!5.68e-22!52;UBERON:0006241!5.68e-22!52;UBERON:0007135!5.68e-22!52;UBERON:0000955!8.37e-21!50;UBERON:0006238!8.37e-21!50;UBERON:0002346!2.83e-20!71;UBERON:0003075!2.83e-20!71;UBERON:0007284!2.83e-20!71;UBERON:0003056!4.24e-20!49;UBERON:0002616!4.82e-20!49;UBERON:0001017!9.21e-20!73;UBERON:0005743!9.21e-20!73;UBERON:0002020!1.94e-19!34;UBERON:0000073!2.81e-19!75;UBERON:0001016!2.81e-19!75;UBERON:0007811!3.82e-19!86;UBERON:0003080!8.14e-17!40;UBERON:0004121!2.86e-16!102;UBERON:0000924!2.86e-16!102;UBERON:0006601!2.86e-16!102;UBERON:0000153!3.05e-16!94;UBERON:0002780!3.31e-16!39;UBERON:0001890!3.31e-16!39;UBERON:0006240!3.31e-16!39;UBERON:0002791!6.31e-16!29;UBERON:0003528!6.31e-16!29;UBERON:0001893!6.31e-16!29;UBERON:0000956!9.54e-11!21;UBERON:0001869!9.54e-11!21;UBERON:0000203!9.54e-11!21;UBERON:0002021!7.24e-10!10;UBERON:0000411!7.24e-10!10;UBERON:0001950!7.24e-10!10;UBERON:0002619!1.03e-08!17 | |ontology_enrichment_uberon=UBERON:0000033!3.26e-22!63;UBERON:0001049!5.68e-22!52;UBERON:0005068!5.68e-22!52;UBERON:0006241!5.68e-22!52;UBERON:0007135!5.68e-22!52;UBERON:0000955!8.37e-21!50;UBERON:0006238!8.37e-21!50;UBERON:0002346!2.83e-20!71;UBERON:0003075!2.83e-20!71;UBERON:0007284!2.83e-20!71;UBERON:0003056!4.24e-20!49;UBERON:0002616!4.82e-20!49;UBERON:0001017!9.21e-20!73;UBERON:0005743!9.21e-20!73;UBERON:0002020!1.94e-19!34;UBERON:0000073!2.81e-19!75;UBERON:0001016!2.81e-19!75;UBERON:0007811!3.82e-19!86;UBERON:0003080!8.14e-17!40;UBERON:0004121!2.86e-16!102;UBERON:0000924!2.86e-16!102;UBERON:0006601!2.86e-16!102;UBERON:0000153!3.05e-16!94;UBERON:0002780!3.31e-16!39;UBERON:0001890!3.31e-16!39;UBERON:0006240!3.31e-16!39;UBERON:0002791!6.31e-16!29;UBERON:0003528!6.31e-16!29;UBERON:0001893!6.31e-16!29;UBERON:0000956!9.54e-11!21;UBERON:0001869!9.54e-11!21;UBERON:0000203!9.54e-11!21;UBERON:0002021!7.24e-10!10;UBERON:0000411!7.24e-10!10;UBERON:0001950!7.24e-10!10;UBERON:0002619!1.03e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.16e-33,64;UBERON:0003075,1.16e-33,64;UBERON:0007284,1.16e-33,64;UBERON:0000073,1.54e-31,54;UBERON:0002020,1.04e-28,34;UBERON:0010371,1.66e-28,73;UBERON:0001049,3.57e-28,52;UBERON:0005068,3.57e-28,52;UBERON:0006241,3.57e-28,52;UBERON:0007135,3.57e-28,52;UBERON:0004121,5.56e-28,95;UBERON:0000924,5.56e-28,95;UBERON:0006601,5.56e-28,95;UBERON:0003056,1.60e-26,49;UBERON:0001017,2.07e-26,73;UBERON:0001016,1.71e-25,75;UBERON:0002021,5.48e-22,10;UBERON:0000411,5.48e-22,10;UBERON:0001950,5.48e-22,10;UBERON:0000955,2.64e-21,47;UBERON:0006238,2.64e-21,47;UBERON:0003528,5.15e-21,29;UBERON:0002791,5.15e-21,29;UBERON:0001893,5.15e-21,29;UBERON:0010314,6.28e-21,92;UBERON:0002616,6.86e-20,46;UBERON:0003080,1.56e-19,40;UBERON:0002780,2.56e-18,39;UBERON:0001890,2.56e-18,39;UBERON:0006240,2.56e-18,39;UBERON:0002619,3.80e-17,17;UBERON:0000956,7.05e-16,21;UBERON:0001869,7.05e-16,21;UBERON:0000203,7.05e-16,21;UBERON:0002240,4.26e-11,6;UBERON:0005174,4.26e-11,6;UBERON:0001137,4.26e-11,6;UBERON:0001948,1.33e-09,5;UBERON:0002315,1.33e-09,5;UBERON:0003076,3.56e-09,12;UBERON:0003057,3.56e-09,12;UBERON:0000025,5.19e-09,114;UBERON:0002950,3.79e-08,4;UBERON:0001891,3.79e-08,4;UBERON:0009616,3.79e-08,4;UBERON:0010286,3.79e-08,4;UBERON:0004111,5.64e-08,122;UBERON:0000970,6.96e-08,9;UBERON:0000019,6.96e-08,9;UBERON:0000047,6.96e-08,9;UBERON:0010312,6.96e-08,9;UBERON:0004088,6.96e-08,9;UBERON:0002104,6.96e-08,9;UBERON:0001456,6.96e-08,9;UBERON:0003072,6.96e-08,9;UBERON:0004128,6.96e-08,9;UBERON:0003071,6.96e-08,9;UBERON:0000483,3.13e-07,174;UBERON:0000119,4.66e-07,176;UBERON:0004684,6.14e-07,3;UBERON:0002275,6.14e-07,3;UBERON:0002038,8.94e-07,3;UBERON:0009663,8.94e-07,3;UBERON:0009661,8.94e-07,3;UBERON:0000125,8.94e-07,3;UBERON:0002308,8.94e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.768436610643109,0.829516898467821,0.945041568321835,0.210324961351382,1.42825492201902,1.10434270475807,0.857435594504678,0.287536413054709,0,2.20231761998777,2.55374676170375,1.53606533256243,0.659431438650969,0.548925861614458,1.04182674111352,1.67509799400829,2.8138130501584,1.37518422999129,2.06240009831567,1.56608848879013,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.04853447583376,6.40500843946077,0.879580464790051,3.82413504423008,4.60287823194595,1.45451631191692,4.54275536589721,0.305518091550949,0,0,0,0.390361328888111,1.14951052216736,1.62055916824814,1.50704817835715,3.74200745332303,2.8185018462667,2.43624483855295,0,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.44066457330998,0,0,0.426576501070468,1.39342003116263,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.502518772325447,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.28440471990234,2.46144541843627,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,1.92792789853084,0.283880170416537,0.178065603667255,0.651547837414304,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.643011105094777,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.480781798079875,0.443068581523732,0.100966449948148,0.457240839929999,0.100826185136841,0.38983152295901,0.481059208201647,0.116876902181569,0,0,0,0,0,0,0,0,0,4.51801474093653,1.84130094602871,2.86447756719698,3.43706364687375,3.42541259885321,3.7769694869485,4.72515750162264,3.15224842256954,3.17199686288943,4.65984280576638,0.103787347584177,0.399024873401031,0.341467211508268,0,0.419226325255965,0.183843508450014,1.33348036680969,0.618105171716683,0,0.252697211763798,0.50695859978048,0.754505365544305,0.37456602987953,0.384150914429216,0.459483751644906,0.476293691283074,0.231768651889711,0.38581844092741,0,0.294397840268795,0.342869252385415,1.06485483695602,0.953744759789284,0,0.376437521661322,0.592302255241736,0.73171189149109,0.263069711437843,0.271608227691724,0,0.474540072496697,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.768436610643109,0.829516898467821,0.945041568321835,0.210324961351382,1.42825492201902,1.10434270475807,0.857435594504678,0.287536413054709,0,2.20231761998777,2.55374676170375,1.53606533256243,0.659431438650969,0.548925861614458,1.04182674111352,1.67509799400829,2.8138130501584,1.37518422999129,2.06240009831567,1.56608848879013,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.04853447583376,6.40500843946077,0.879580464790051,3.82413504423008,4.60287823194595,1.45451631191692,4.54275536589721,0.305518091550949,0,0,0,0.390361328888111,1.14951052216736,1.62055916824814,1.50704817835715,3.74200745332303,2.8185018462667,2.43624483855295,0,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.44066457330998,0,0,0.426576501070468,1.39342003116263,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.502518772325447,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.28440471990234,2.46144541843627,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,1.92792789853084,0.283880170416537,0.178065603667255,0.651547837414304,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.643011105094777,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.480781798079875,0.443068581523732,0.100966449948148,0.457240839929999,0.100826185136841,0.38983152295901,0.481059208201647,0.116876902181569,0,0,0,0,0,0,0,0,0,4.51801474093653,1.84130094602871,2.86447756719698,3.43706364687375,3.42541259885321,3.7769694869485,4.72515750162264,3.15224842256954,3.17199686288943,4.65984280576638,0.103787347584177,0.399024873401031,0.341467211508268,0,0.419226325255965,0.183843508450014,1.33348036680969,0.618105171716683,0,0.252697211763798,0.50695859978048,0.754505365544305,0.37456602987953,0.384150914429216,0.459483751644906,0.476293691283074,0.231768651889711,0.38581844092741,0,0.294397840268795,0.342869252385415,1.06485483695602,0.953744759789284,0,0.376437521661322,0.592302255241736,0.73171189149109,0.263069711437843,0.271608227691724,0,0.474540072496697,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0 | ||
|short_description=p3@Nlgn1 | |short_description=p3@Nlgn1 | ||
}} | }} |
Latest revision as of 21:44, 1 October 2015
Short description: | p3@Nlgn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nlgn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 394bp_to_NM_138666, uc008otc.1, uc008otd.1_5end |
EntrezGene: | Nlgn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.85e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.85e-12 | 23 |
neuron | 2.44e-07 | 33 |
neuronal stem cell | 2.44e-07 | 33 |
neuroblast | 2.44e-07 | 33 |
electrically signaling cell | 2.44e-07 | 33 |
raphe nuclei neuron | 6.14e-07 | 3 |
neuron of the substantia nigra | 8.94e-07 | 3 |