FFCP PHASE1:Mm9::chr10:94013710..94013721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319880 | |EntrezGene=319880 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q8R310 | |UniProt=Q8R310 | ||
|association_with_transcript=93bp_to_ENSMUST00000117460_5end | |association_with_transcript=93bp_to_ENSMUST00000117460_5end | ||
|cluster_id=chr10:94013710..94013721,+ | |||
|description=CAGE_peak_14_at_Tmcc3_5end | |description=CAGE_peak_14_at_Tmcc3_5end | ||
|id=chr10:94013710..94013721,+ | |id=chr10:94013710..94013721,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.20e-12!25;CL:0000075!8.01e-12!7;CL:0000239!6.36e-11!6;CL:0000677!6.36e-11!6;CL:0000212!6.36e-11!6;CL:0000584!6.36e-11!6;CL:0002076!1.12e-09!15;CL:0002563!5.97e-09!9;CL:0002251!5.97e-09!9;CL:0000223!4.75e-08!20 | |ontology_enrichment_celltype=CL:0000066!5.20e-12!25;CL:0000075!8.01e-12!7;CL:0000239!6.36e-11!6;CL:0000677!6.36e-11!6;CL:0000212!6.36e-11!6;CL:0000584!6.36e-11!6;CL:0002076!1.12e-09!15;CL:0002563!5.97e-09!9;CL:0002251!5.97e-09!9;CL:0000223!4.75e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.64e-22,6;CL:0000677,1.64e-22,6;CL:0000584,1.64e-22,6;CL:0000075,3.15e-19,7;CL:0002563,7.63e-15,9;CL:0002251,7.63e-15,9;CL:0000066,1.11e-13,25;CL:0000682,1.15e-12,3;CL:0002076,1.75e-11,15;CL:0000223,2.11e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.34e-21!59;UBERON:0000160!1.76e-20!43;UBERON:0000344!4.46e-18!15;UBERON:0001242!6.27e-15!13;UBERON:0000060!6.27e-15!13;UBERON:0001262!6.27e-15!13;UBERON:0004786!6.27e-15!13;UBERON:0001007!2.64e-12!128;UBERON:0001555!2.64e-12!128;UBERON:0007026!2.64e-12!128;UBERON:0004119!6.02e-12!130;UBERON:0000925!6.02e-12!130;UBERON:0006595!6.02e-12!130;UBERON:0004921!1.05e-10!126;UBERON:0004185!1.05e-10!126;UBERON:0004923!6.53e-10!24;UBERON:0003350!5.97e-09!9;UBERON:0004808!5.97e-09!9;UBERON:0001277!5.97e-09!9;UBERON:0000485!7.42e-09!11 | |ontology_enrichment_uberon=UBERON:0005409!8.34e-21!59;UBERON:0000160!1.76e-20!43;UBERON:0000344!4.46e-18!15;UBERON:0001242!6.27e-15!13;UBERON:0000060!6.27e-15!13;UBERON:0001262!6.27e-15!13;UBERON:0004786!6.27e-15!13;UBERON:0001007!2.64e-12!128;UBERON:0001555!2.64e-12!128;UBERON:0007026!2.64e-12!128;UBERON:0004119!6.02e-12!130;UBERON:0000925!6.02e-12!130;UBERON:0006595!6.02e-12!130;UBERON:0004921!1.05e-10!126;UBERON:0004185!1.05e-10!126;UBERON:0004923!6.53e-10!24;UBERON:0003350!5.97e-09!9;UBERON:0004808!5.97e-09!9;UBERON:0001277!5.97e-09!9;UBERON:0000485!7.42e-09!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.73e-36,31;UBERON:0000344,1.02e-34,15;UBERON:0001242,8.69e-28,13;UBERON:0001262,8.69e-28,13;UBERON:0004786,8.69e-28,13;UBERON:0005409,1.73e-22,47;UBERON:0004923,6.69e-21,24;UBERON:0002108,5.69e-15,4;UBERON:0003350,7.63e-15,9;UBERON:0004808,7.63e-15,9;UBERON:0001277,7.63e-15,9;UBERON:0000485,4.76e-12,11;UBERON:0000331,1.00e-11,3;UBERON:0002116,1.00e-11,3;UBERON:0001204,1.00e-11,3;UBERON:0001168,1.00e-11,3;UBERON:0001007,1.35e-10,116;UBERON:0001555,1.35e-10,116;UBERON:0007026,1.35e-10,116;UBERON:0004119,2.37e-10,118;UBERON:0000925,2.37e-10,118;UBERON:0006595,2.37e-10,118;UBERON:0001962,8.91e-09,2;UBERON:0001961,8.91e-09,2;UBERON:0001744,8.91e-09,2;UBERON:0004921,2.37e-08,114;UBERON:0001155,4.17e-08,2;UBERON:0000059,4.17e-08,2 | |||
|phase1_expression=0,5.93258192986914,9.55498402718026,5.44435580352294,2.50447864973174,1.84667199103079,3.03696432774183,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.35877634027623,3.44539178469012,6.8921919385452,6.24866574789078,2.85035129184561,1.76421090831952,4.43461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0.292780797011547,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,9.58214470653014,1.58670339998127,0,0,0.128867461322093,0,0,0.570676878337677,2.84717436926707,0.494096864172033,0.251335208800269,0.397912944082302,0.974820435595601,2.69645822596266,2.59365659849633,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.578574190077352,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,5.93258192986914,9.55498402718026,5.44435580352294,2.50447864973174,1.84667199103079,3.03696432774183,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.35877634027623,3.44539178469012,6.8921919385452,6.24866574789078,2.85035129184561,1.76421090831952,4.43461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0.292780797011547,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,9.58214470653014,1.58670339998127,0,0,0.128867461322093,0,0,0.570676878337677,2.84717436926707,0.494096864172033,0.251335208800269,0.397912944082302,0.974820435595601,2.69645822596266,2.59365659849633,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.578574190077352,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p14@Tmcc3 | |short_description=p14@Tmcc3 | ||
}} | }} |
Latest revision as of 14:47, 26 September 2015
Short description: | p14@Tmcc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Tmcc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 93bp_to_ENSMUST00000117460_5end |
EntrezGene: | Tmcc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.64e-22 | 6 |
gut absorptive cell | 1.64e-22 | 6 |
enterocyte | 1.64e-22 | 6 |
columnar/cuboidal epithelial cell | 3.15e-19 | 7 |
intestinal epithelial cell | 7.63e-15 | 9 |
epithelial cell of alimentary canal | 7.63e-15 | 9 |
epithelial cell | 1.11e-13 | 25 |
M cell of gut | 1.15e-12 | 3 |
endo-epithelial cell | 1.75e-11 | 15 |
endodermal cell | 2.11e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.73e-36 | 31 |
mucosa | 1.02e-34 | 15 |
intestinal mucosa | 8.69e-28 | 13 |
wall of intestine | 8.69e-28 | 13 |
gastrointestinal system mucosa | 8.69e-28 | 13 |
gastrointestinal system | 1.73e-22 | 47 |
organ component layer | 6.69e-21 | 24 |
small intestine | 5.69e-15 | 4 |
epithelium of mucosa | 7.63e-15 | 9 |
gastrointestinal system epithelium | 7.63e-15 | 9 |
intestinal epithelium | 7.63e-15 | 9 |
simple columnar epithelium | 4.76e-12 | 11 |
ileal mucosa | 1.00e-11 | 3 |
ileum | 1.00e-11 | 3 |
mucosa of small intestine | 1.00e-11 | 3 |
wall of small intestine | 1.00e-11 | 3 |
digestive system | 1.35e-10 | 116 |
digestive tract | 1.35e-10 | 116 |
primitive gut | 1.35e-10 | 116 |
endoderm-derived structure | 2.37e-10 | 118 |
endoderm | 2.37e-10 | 118 |
presumptive endoderm | 2.37e-10 | 118 |
gut-associated lymphoid tissue | 8.91e-09 | 2 |
mucosa-associated lymphoid tissue | 8.91e-09 | 2 |
lymphoid tissue | 8.91e-09 | 2 |
subdivision of digestive tract | 2.37e-08 | 114 |
colon | 4.17e-08 | 2 |
large intestine | 4.17e-08 | 2 |