FFCP PHASE1:Hg19::chr2:201729366..201729392,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:201729366..201729392,-
|short_description=p1@CLK1
|description=CAGE_peak_1_at_CLK1_5end
|association_with_transcript=0bp_to_ENST00000409403,ENST00000432425...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1195 | |EntrezGene=1195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2068 | |HGNC=2068 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBF5 | |UniProt=F8WBF5 | ||
|association_with_transcript=0bp_to_ENST00000409403,ENST00000432425,ENST00000482590,ENST00000492793_5end | |||
|cluster_id=chr2:201729366..201729392,- | |||
|coexpression_cluster_id=C723 | |||
|description=CAGE_peak_1_at_CLK1_5end | |||
|id=chr2:201729366..201729392,- | |||
|ontology_enrichment_celltype=CL:0000738!1.52e-35!140;CL:0000037!1.34e-31!172;CL:0000566!1.34e-31!172;CL:0002031!1.46e-29!124;CL:0002032!9.52e-29!165;CL:0000837!9.52e-29!165;CL:0000988!1.64e-27!182;CL:0002087!8.34e-27!119;CL:0002057!1.67e-23!42;CL:0000860!5.45e-22!45;CL:0000766!2.92e-21!76;CL:0000557!2.30e-18!71;CL:0000839!3.56e-18!70;CL:0000763!5.94e-18!112;CL:0000049!5.94e-18!112;CL:0002009!3.09e-16!65;CL:0002194!2.20e-15!63;CL:0000576!2.20e-15!63;CL:0000040!2.20e-15!63;CL:0000559!2.20e-15!63;CL:0000838!1.58e-10!52;CL:0000542!3.35e-10!53;CL:0000051!3.35e-10!53;CL:0000791!7.90e-09!18;CL:0000789!7.90e-09!18;CL:0002420!7.90e-09!18;CL:0002419!7.90e-09!18;CL:0000790!7.90e-09!18;CL:0000084!7.44e-07!25;CL:0000827!7.44e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-18;33!CL:0002057;1.14e-18;33!CL:0000576;3.15e-13;48!CL:0000473;9.33e-13;39!CL:0000234;9.33e-13;39!CL:0000766;7.71e-11;69!CL:0002087;5.50e-10;104!CL:0000791;7.93e-09;18!CL:0000789;7.93e-09;18!CL:0002419;7.93e-09;18!CL:0000738;3.17e-08;136!CL:0000084;7.78e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.49e-36,136;CL:0000037,2.56e-32,168;CL:0002031,1.56e-30,120;CL:0002032,1.95e-29,161;CL:0000837,1.95e-29,161;CL:0000988,8.09e-29,177;CL:0002087,9.96e-28,115;CL:0000860,1.67e-23,42;CL:0002057,1.67e-23,42;CL:0000766,1.94e-22,72;CL:0000473,8.06e-20,48;CL:0000234,8.06e-20,48;CL:0000557,1.85e-19,67;CL:0000839,2.84e-19,66;CL:0000763,1.27e-18,108;CL:0000049,1.27e-18,108;CL:0002009,2.70e-17,61;CL:0002194,2.03e-16,59;CL:0000576,2.03e-16,59;CL:0000040,2.03e-16,59;CL:0000559,2.03e-16,59;CL:0000838,1.58e-10,52;CL:0000542,3.35e-10,53;CL:0000051,3.35e-10,53;CL:0000791,7.90e-09,18;CL:0000789,7.90e-09,18;CL:0002420,7.90e-09,18;CL:0002419,7.90e-09,18;CL:0000790,7.90e-09,18;CL:0000084,7.44e-07,25;CL:0000827,7.44e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.03e-17;42!CL:0000790;7.93e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-24!115;UBERON:0002390!2.49e-20!102;UBERON:0003061!2.49e-20!102;UBERON:0002193!4.13e-17!112;UBERON:0002371!6.34e-15!80;UBERON:0001474!6.86e-14!86;UBERON:0002405!1.48e-10!115;UBERON:0004765!5.26e-10!101;UBERON:0001434!5.26e-10!101;UBERON:0001049!2.86e-09!57;UBERON:0005068!2.86e-09!57;UBERON:0006241!2.86e-09!57;UBERON:0007135!2.86e-09!57;UBERON:0003080!4.31e-08!42;UBERON:0002780!1.01e-07!41;UBERON:0001890!1.01e-07!41;UBERON:0006240!1.01e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.97e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.98e-24,114;UBERON:0002390,3.66e-21,98;UBERON:0003061,3.66e-21,98;UBERON:0002193,9.48e-18,108;UBERON:0002371,1.03e-15,76;UBERON:0001474,1.43e-14,82;UBERON:0002405,8.14e-14,93;UBERON:0004765,6.91e-12,90;UBERON:0001434,4.93e-10,100;UBERON:0001049,6.53e-09,56;UBERON:0005068,6.53e-09,56;UBERON:0006241,6.53e-09,56;UBERON:0007135,6.53e-09,56;UBERON:0000073,7.54e-08,53;UBERON:0002616,7.54e-08,53;UBERON:0002780,1.01e-07,41;UBERON:0001890,1.01e-07,41;UBERON:0003080,1.01e-07,41;UBERON:0006240,1.01e-07,41 | |||
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| ||
|short_description=p1@CLK1 | |||
}} | }} |
Latest revision as of 11:23, 19 September 2015
Short description: | p1@CLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLK1_5end |
Coexpression cluster: | C723_CD14_CD4_Eosinophils_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 0bp_to_ENST00000409403, ENST00000432425, ENST00000482590, ENST00000492793_5end |
EntrezGene: | CLK1 |
HGNC: | 2068 |
UniProt: | F8WBF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.98e-24 | 114 |
hematopoietic system | 3.66e-21 | 98 |
blood island | 3.66e-21 | 98 |
hemolymphoid system | 9.48e-18 | 108 |
bone marrow | 1.03e-15 | 76 |
bone element | 1.43e-14 | 82 |
immune system | 8.14e-14 | 93 |
skeletal element | 6.91e-12 | 90 |
skeletal system | 4.93e-10 | 100 |
neural tube | 6.53e-09 | 56 |
neural rod | 6.53e-09 | 56 |
future spinal cord | 6.53e-09 | 56 |
neural keel | 6.53e-09 | 56 |
regional part of nervous system | 7.54e-08 | 53 |
regional part of brain | 7.54e-08 | 53 |
regional part of forebrain | 1.01e-07 | 41 |
forebrain | 1.01e-07 | 41 |
anterior neural tube | 1.01e-07 | 41 |
future forebrain | 1.01e-07 | 41 |