FFCP PHASE1:Hg19::chr2:217259800..217259818,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:217259800..217259818,+
|short_description=p@chr2:217259800..217259818,+
|description=CAGE_peak_at_chr2:217259800..217259818,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:217259800..217259818,+ | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_at_chr2:217259800..217259818,+ | |||
|id=chr2:217259800..217259818,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.08e-55!70;CL:0000557!8.50e-55!71;CL:0000766!1.17e-50!76;CL:0002194!7.80e-49!63;CL:0000576!7.80e-49!63;CL:0000040!7.80e-49!63;CL:0000559!7.80e-49!63;CL:0002009!4.16e-47!65;CL:0000763!3.12e-38!112;CL:0000049!3.12e-38!112;CL:0002031!1.95e-37!124;CL:0000738!5.07e-36!140;CL:0002087!4.30e-33!119;CL:0000037!1.35e-32!172;CL:0000566!1.35e-32!172;CL:0002032!8.37e-31!165;CL:0000837!8.37e-31!165;CL:0000988!3.04e-30!182;CL:0002057!6.10e-27!42;CL:0000860!8.12e-25!45;CL:0000235!1.04e-13!10;CL:0002619!2.02e-12!3;CL:0002274!5.16e-11!5;CL:0000457!5.16e-11!5;CL:0002191!5.16e-11!5;CL:0000097!5.16e-11!5;CL:0000831!5.16e-11!5;CL:0002028!5.16e-11!5;CL:0000134!2.45e-10!358;CL:0002320!6.05e-10!365;CL:0000219!3.22e-09!390;CL:0000048!6.31e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.62e-63;6!CL:0000473;6.74e-46;39!CL:0000234;6.74e-46;39!CL:0002619;2.98e-32;3!CL:0000576;2.40e-23;48!CL:0000860;5.90e-23;33!CL:0002057;5.90e-23;33!CL:0000766;6.54e-21;69!CL:0000763;2.47e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.49e-63,6;CL:0002194,1.65e-60,59;CL:0000576,1.65e-60,59;CL:0000040,1.65e-60,59;CL:0000559,1.65e-60,59;CL:0002009,1.73e-58,61;CL:0000839,5.76e-54,66;CL:0000557,3.85e-53,67;CL:0000766,2.35e-49,72;CL:0000473,7.99e-47,48;CL:0000234,7.99e-47,48;CL:0000763,2.52e-32,108;CL:0000049,2.52e-32,108;CL:0002619,3.32e-32,3;CL:0002087,3.08e-30,115;CL:0002031,6.78e-29,120;CL:0000738,2.99e-25,136;CL:0002032,5.42e-21,161;CL:0000837,5.42e-21,161;CL:0000037,5.03e-20,168;CL:0000988,6.84e-19,177;CL:0000860,7.60e-19,42;CL:0002057,7.60e-19,42;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-13;42!CL:0000049;4.28e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-47!80;UBERON:0001474!8.25e-44!86;UBERON:0002390!7.83e-43!102;UBERON:0003061!7.83e-43!102;UBERON:0002193!3.31e-38!112;UBERON:0004765!4.66e-36!101;UBERON:0001434!4.66e-36!101;UBERON:0002405!1.23e-30!115;UBERON:0002204!1.92e-18!167;UBERON:0003081!1.42e-16!216;UBERON:0002384!3.71e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-46,76;UBERON:0001474,3.79e-43,82;UBERON:0004765,3.67e-39,90;UBERON:0002405,7.68e-38,93;UBERON:0002390,8.11e-36,98;UBERON:0003061,8.11e-36,98;UBERON:0001434,4.60e-35,100;UBERON:0002193,2.52e-32,108;UBERON:0002204,3.70e-20,167;UBERON:0003081,3.56e-16,203;UBERON:0000926,1.52e-09,315;UBERON:0004120,1.52e-09,315;UBERON:0006603,1.52e-09,315;UBERON:0002384,1.05e-07,371 | |||
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| ||
|short_description=p@chr2:217259800..217259818,+ | |||
}} | }} |
Latest revision as of 06:23, 29 July 2015
Short description: | p@chr2:217259800..217259818, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:217259800..217259818, + |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.49e-63 | 6 |
monopoietic cell | 1.65e-60 | 59 |
monocyte | 1.65e-60 | 59 |
monoblast | 1.65e-60 | 59 |
promonocyte | 1.65e-60 | 59 |
macrophage dendritic cell progenitor | 1.73e-58 | 61 |
myeloid lineage restricted progenitor cell | 5.76e-54 | 66 |
granulocyte monocyte progenitor cell | 3.85e-53 | 67 |
myeloid leukocyte | 2.35e-49 | 72 |
defensive cell | 7.99e-47 | 48 |
phagocyte | 7.99e-47 | 48 |
myeloid cell | 2.52e-32 | 108 |
common myeloid progenitor | 2.52e-32 | 108 |
adult endothelial progenitor cell | 3.32e-32 | 3 |
nongranular leukocyte | 3.08e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 6.78e-29 | 120 |
leukocyte | 2.99e-25 | 136 |
hematopoietic oligopotent progenitor cell | 5.42e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-21 | 161 |
hematopoietic stem cell | 5.03e-20 | 168 |
hematopoietic cell | 6.84e-19 | 177 |
classical monocyte | 7.60e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.60e-19 | 42 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-46 | 76 |
bone element | 3.79e-43 | 82 |
skeletal element | 3.67e-39 | 90 |
immune system | 7.68e-38 | 93 |
hematopoietic system | 8.11e-36 | 98 |
blood island | 8.11e-36 | 98 |
skeletal system | 4.60e-35 | 100 |
hemolymphoid system | 2.52e-32 | 108 |
musculoskeletal system | 3.70e-20 | 167 |
lateral plate mesoderm | 3.56e-16 | 203 |
mesoderm | 1.52e-09 | 315 |
mesoderm-derived structure | 1.52e-09 | 315 |
presumptive mesoderm | 1.52e-09 | 315 |
connective tissue | 1.05e-07 | 371 |