FFCP PHASE1:Mm9::chr14:41998494..41998501,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20390 | |EntrezGene=20390 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=32 | |MCL_coexpression_id=32 | ||
|TSSclassifier=NA | |||
|UniProt=P50404 | |UniProt=P50404 | ||
|association_with_transcript=-7bp_to_ENSMUST00000077136,NM_009160,uc007tcr.2_5end | |association_with_transcript=-7bp_to_ENSMUST00000077136,NM_009160,uc007tcr.2_5end | ||
|cluster_id=chr14:41998494..41998501,- | |||
|description=CAGE_peak_3_at_Sftpd_5end | |description=CAGE_peak_3_at_Sftpd_5end | ||
|id=chr14:41998494..41998501,- | |id=chr14:41998494..41998501,- | ||
|ontology_enrichment_celltype=CL:0000068!1.91e-08!3;CL:0002202!1.91e-08!3;CL:0000069!1.91e-08!3;CL:0002632!1.91e-08!3;CL:0002368!1.91e-08!3;CL:0000307!1.91e-08!3;CL:0000377!1.91e-08!3 | |ontology_enrichment_celltype=CL:0000068!1.91e-08!3;CL:0002202!1.91e-08!3;CL:0000069!1.91e-08!3;CL:0002632!1.91e-08!3;CL:0002368!1.91e-08!3;CL:0000307!1.91e-08!3;CL:0000377!1.91e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.38e-16,3;CL:0002202,6.38e-16,3;CL:0000069,6.38e-16,3;CL:0002632,6.38e-16,3;CL:0002368,6.38e-16,3;CL:0000307,6.38e-16,3;CL:0000377,6.38e-16,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.45e-24!17;UBERON:0005181!2.45e-24!17;UBERON:0002224!2.45e-24!17;UBERON:0000915!2.45e-24!17;UBERON:0008947!2.45e-24!17;UBERON:0003258!2.45e-24!17;UBERON:0005153!2.78e-20!17;UBERON:0002048!8.46e-18!14;UBERON:0000117!8.46e-18!14;UBERON:0000171!8.46e-18!14;UBERON:0000170!8.46e-18!14;UBERON:0005597!8.46e-18!14;UBERON:0000118!8.46e-18!14;UBERON:0005157!9.88e-12!27;UBERON:0003100!1.01e-09!11;UBERON:0000065!1.29e-09!41;UBERON:0001004!2.61e-09!42;UBERON:0003126!1.91e-08!3;UBERON:0001005!1.91e-08!3;UBERON:0007196!1.91e-08!3;UBERON:0001558!1.91e-08!3 | |ontology_enrichment_uberon=UBERON:0005178!2.45e-24!17;UBERON:0005181!2.45e-24!17;UBERON:0002224!2.45e-24!17;UBERON:0000915!2.45e-24!17;UBERON:0008947!2.45e-24!17;UBERON:0003258!2.45e-24!17;UBERON:0005153!2.78e-20!17;UBERON:0002048!8.46e-18!14;UBERON:0000117!8.46e-18!14;UBERON:0000171!8.46e-18!14;UBERON:0000170!8.46e-18!14;UBERON:0005597!8.46e-18!14;UBERON:0000118!8.46e-18!14;UBERON:0005157!9.88e-12!27;UBERON:0003100!1.01e-09!11;UBERON:0000065!1.29e-09!41;UBERON:0001004!2.61e-09!42;UBERON:0003126!1.91e-08!3;UBERON:0001005!1.91e-08!3;UBERON:0007196!1.91e-08!3;UBERON:0001558!1.91e-08!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.97e-51,17;UBERON:0005181,5.97e-51,17;UBERON:0002224,5.97e-51,17;UBERON:0000915,5.97e-51,17;UBERON:0008947,5.97e-51,17;UBERON:0003258,5.97e-51,17;UBERON:0002048,4.43e-37,14;UBERON:0000117,4.43e-37,14;UBERON:0000171,4.43e-37,14;UBERON:0000170,4.43e-37,14;UBERON:0005597,4.43e-37,14;UBERON:0000118,4.43e-37,14;UBERON:0005153,2.52e-30,17;UBERON:0005157,1.36e-25,20;UBERON:0000065,3.79e-20,41;UBERON:0001004,1.26e-19,42;UBERON:0003126,6.38e-16,3;UBERON:0001005,6.38e-16,3;UBERON:0007196,6.38e-16,3;UBERON:0001558,6.38e-16,3;UBERON:0009569,7.94e-12,66;UBERON:0005177,1.44e-09,79;UBERON:0001041,2.00e-09,80;UBERON:0002100,3.67e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59789249213457,1.52015919285059,1.51657333504435,0.22836775943812,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.97667226899665,0,0,0,0,1.00503754465089,3.09456733151818,4.48807390072937,5.2019597555043,5.3151525515706,4.30527875375215,9.01248230936559,7.7708241839653,12.2951699794285,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0,1.50145980360946,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59789249213457,1.52015919285059,1.51657333504435,0.22836775943812,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.97667226899665,0,0,0,0,1.00503754465089,3.09456733151818,4.48807390072937,5.2019597555043,5.3151525515706,4.30527875375215,9.01248230936559,7.7708241839653,12.2951699794285,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0,1.50145980360946,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p3@Sftpd | |short_description=p3@Sftpd | ||
}} | }} |
Latest revision as of 23:21, 25 September 2015
Short description: | p3@Sftpd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sftpd_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | -7bp_to_ENSMUST00000077136, NM_009160, uc007tcr.2_5end |
EntrezGene: | Sftpd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.38e-16 | 3 |
epithelial cell of tracheobronchial tree | 6.38e-16 | 3 |
branched duct epithelial cell | 6.38e-16 | 3 |
epithelial cell of lower respiratory tract | 6.38e-16 | 3 |
respiratory epithelial cell | 6.38e-16 | 3 |
tracheal epithelial cell | 6.38e-16 | 3 |
tracheoblast | 6.38e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 5.97e-51 | 17 |
thoracic segment organ | 5.97e-51 | 17 |
thoracic cavity | 5.97e-51 | 17 |
thoracic segment of trunk | 5.97e-51 | 17 |
respiratory primordium | 5.97e-51 | 17 |
endoderm of foregut | 5.97e-51 | 17 |
lung | 4.43e-37 | 14 |
respiratory tube | 4.43e-37 | 14 |
respiration organ | 4.43e-37 | 14 |
pair of lungs | 4.43e-37 | 14 |
lung primordium | 4.43e-37 | 14 |
lung bud | 4.43e-37 | 14 |
epithelial bud | 2.52e-30 | 17 |
epithelial fold | 1.36e-25 | 20 |
respiratory tract | 3.79e-20 | 41 |
respiratory system | 1.26e-19 | 42 |
trachea | 6.38e-16 | 3 |
respiratory airway | 6.38e-16 | 3 |
tracheobronchial tree | 6.38e-16 | 3 |
lower respiratory tract | 6.38e-16 | 3 |
subdivision of trunk | 7.94e-12 | 66 |
trunk region element | 1.44e-09 | 79 |
foregut | 2.00e-09 | 80 |
trunk | 3.67e-08 | 90 |