FFCP PHASE1:Hg19::chr2:56149625..56149641,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:56149625..56149641,-
|short_description=p11@EFEMP1
|description=CAGE_peak_11_at_EFEMP1_5end
|association_with_transcript=-46bp_to_DQ892514,DQ895728_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2202 | |EntrezGene=2202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3218 | |HGNC=3218 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_DQ892514,DQ895728_5end | |||
|cluster_id=chr2:56149625..56149641,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_11_at_EFEMP1_5end | |||
|id=chr2:56149625..56149641,- | |||
|ontology_enrichment_celltype=CL:0002139!2.71e-18!24;CL:0000213!3.26e-16!57;CL:0000215!3.26e-16!57;CL:0000115!4.33e-16!35;CL:0002078!1.08e-14!44;CL:0005020!6.60e-12!6;CL:0002138!6.60e-12!6;CL:0005022!6.60e-12!6;CL:0000222!4.43e-11!119;CL:0000071!9.12e-10!18;CL:0002546!9.12e-10!18;CL:1000306!3.44e-08!4;CL:0002547!3.44e-08!4;CL:0000153!2.68e-07!9;CL:0000447!2.68e-07!9;CL:0002144!7.88e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002138;5.83e-39;6!CL:0002139;6.59e-31;24!CL:0002078;6.52e-28;45!CL:0000115;9.48e-26;36!CL:0000213;1.75e-22;58!CL:0000215;1.75e-22;58!CL:0002144;1.44e-20;3!CL:0000153;6.05e-18;9!CL:0000447;6.05e-18;9!CL:1000306;3.05e-15;4!CL:0002547;3.05e-15;4!CL:0002188;5.83e-12;5!CL:0000327;1.08e-10;15!CL:0000499;1.24e-10;28!CL:0000214;4.69e-10;3!CL:0000138;4.71e-10;6!CL:0000135;7.30e-10;3!CL:0000388;7.30e-10;3!CL:0000071;7.03e-09;18!CL:1000746;1.10e-08;7!CL:1000612;1.10e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,6.27e-39,6;CL:0002138,6.27e-39,6;CL:0005022,6.27e-39,6;CL:0000213,1.08e-36,58;CL:0000215,1.08e-36,58;CL:0002078,5.68e-34,45;CL:0000115,1.25e-32,36;CL:0002139,5.55e-31,24;CL:0002144,1.44e-20,3;CL:0000222,1.37e-19,121;CL:0000153,4.81e-18,9;CL:0000447,4.81e-18,9;CL:1000306,3.62e-15,4;CL:0002547,3.62e-15,4;CL:0002188,3.98e-12,5;CL:0000327,9.41e-11,15;CL:0000499,1.15e-10,28;CL:0000058,4.15e-10,6;CL:0000138,4.15e-10,6;CL:0000214,4.20e-10,3;CL:0000135,7.81e-10,3;CL:0000388,7.81e-10,3;CL:0000071,6.25e-09,18;CL:0002546,6.25e-09,18;CL:1000746,8.38e-09,7;CL:1000612,8.38e-09,7;CL:0002321,3.18e-07,250 | |||
|ontology_enrichment_development_v019=CL:0005022;5.83e-39;6!CL:0002546;7.03e-09;18!CL:0000222;2.04e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.37e-16!79;UBERON:0007798!2.37e-16!79;UBERON:0000055!4.16e-15!69;UBERON:0004535!3.11e-14!110;UBERON:0001009!1.50e-13!113;UBERON:0004872!3.74e-11!84;UBERON:0006914!7.45e-11!25;UBERON:0001981!2.27e-10!60;UBERON:0007500!2.27e-10!60;UBERON:0004537!2.27e-10!60;UBERON:0006965!2.27e-10!60;UBERON:0001986!9.12e-10!18;UBERON:0004638!9.12e-10!18;UBERON:0004852!9.12e-10!18;UBERON:0003914!9.38e-10!118;UBERON:0000487!6.32e-09!22;UBERON:0001473!1.23e-08!8;UBERON:0004536!1.23e-08!8;UBERON:0006558!1.23e-08!8;UBERON:0000415!3.44e-08!4;UBERON:0007240!3.44e-08!4;UBERON:0005742!3.44e-08!4;UBERON:0005734!3.44e-08!4;UBERON:0004664!3.44e-08!4;UBERON:0004663!3.44e-08!4;UBERON:0000477!3.80e-08!286;UBERON:0001915!7.88e-07!3;UBERON:0001982!7.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.04e-29;8!UBERON:0004536;4.04e-29;8!UBERON:0006558;4.04e-29;8!UBERON:0002465;3.30e-23;10!UBERON:0010523;1.44e-20;3!UBERON:0001915;1.44e-20;3!UBERON:0001982;1.44e-20;3!UBERON:0004797;3.05e-15;4!UBERON:0000415;3.05e-15;4!UBERON:0007240;3.05e-15;4!UBERON:0005742;3.05e-15;4!UBERON:0005734;3.05e-15;4!UBERON:0004664;3.05e-15;4!UBERON:0004663;3.05e-15;4!UBERON:0006914;4.34e-12;25!UBERON:0000055;6.15e-12;65!UBERON:0006915;4.69e-10;3!UBERON:0007616;4.69e-10;3!UBERON:0002217;4.69e-10;3!UBERON:0002018;4.69e-10;3!UBERON:0007846;7.30e-10;3!UBERON:0000043;7.30e-10;3!UBERON:0007845;7.30e-10;3!UBERON:0004638;7.03e-09;18!UBERON:0001986;7.03e-09;18!UBERON:0004852;7.03e-09;18!UBERON:0002049;1.05e-08;75!UBERON:0007798;1.05e-08;75!UBERON:0000074;1.10e-08;7!UBERON:0001229;1.10e-08;7!UBERON:0002405;2.90e-08;27!UBERON:0000487;3.20e-07;22!UBERON:0004457;3.53e-07;9!UBERON:0000042;3.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,4.26e-29,8;UBERON:0004536,4.26e-29,8;UBERON:0006558,4.26e-29,8;UBERON:0002465,3.44e-23,10;UBERON:0010523,1.44e-20,3;UBERON:0001915,1.44e-20,3;UBERON:0001982,1.44e-20,3;UBERON:0000055,1.64e-18,68;UBERON:0002049,9.41e-16,78;UBERON:0007798,9.41e-16,78;UBERON:0000415,3.62e-15,4;UBERON:0007240,3.62e-15,4;UBERON:0005742,3.62e-15,4;UBERON:0005734,3.62e-15,4;UBERON:0004664,3.62e-15,4;UBERON:0004663,3.62e-15,4;UBERON:0006914,3.69e-12,25;UBERON:0004535,4.24e-12,109;UBERON:0001009,1.09e-11,112;UBERON:0006915,4.20e-10,3;UBERON:0007616,4.20e-10,3;UBERON:0002217,4.20e-10,3;UBERON:0002018,4.20e-10,3;UBERON:0007846,7.81e-10,3;UBERON:0000043,7.81e-10,3;UBERON:0007845,7.81e-10,3;UBERON:0004638,6.25e-09,18;UBERON:0001986,6.25e-09,18;UBERON:0004852,6.25e-09,18;UBERON:0004797,6.93e-09,7;UBERON:0010532,8.38e-09,7;UBERON:0000074,8.38e-09,7;UBERON:0001229,8.38e-09,7;UBERON:0001230,8.38e-09,7;UBERON:0003220,8.38e-09,7;UBERON:0005749,8.38e-09,7;UBERON:0004199,8.38e-09,7;UBERON:0004209,8.38e-09,7;UBERON:0004198,8.38e-09,7;UBERON:0005103,9.26e-08,8;UBERON:0000083,9.26e-08,8;UBERON:0009201,9.26e-08,8;UBERON:0006553,9.26e-08,8;UBERON:0003074,9.26e-08,8;UBERON:0003060,9.26e-08,8;UBERON:0007500,1.78e-07,59;UBERON:0001981,1.78e-07,59;UBERON:0004537,1.78e-07,59;UBERON:0006965,1.78e-07,59;UBERON:0000487,2.91e-07,22;UBERON:0000080,6.03e-07,9;UBERON:0002120,6.03e-07,9;UBERON:0004875,6.03e-07,9;UBERON:0005721,6.03e-07,9;UBERON:0005754,6.03e-07,9;UBERON:0007297,6.03e-07,9;UBERON:0003914,7.11e-07,117 | |||
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| ||
|short_description=p11@EFEMP1 | |||
}} | }} |
Latest revision as of 18:15, 17 September 2015
Short description: | p11@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_EFEMP1_5end |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | -46bp_to_DQ892514, DQ895728_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 6.27e-39 | 6 |
endothelial cell of lymphatic vessel | 6.27e-39 | 6 |
vascular lymphangioblast | 6.27e-39 | 6 |
lining cell | 1.08e-36 | 58 |
barrier cell | 1.08e-36 | 58 |
meso-epithelial cell | 5.68e-34 | 45 |
endothelial cell | 1.25e-32 | 36 |
endothelial cell of vascular tree | 5.55e-31 | 24 |
capillary endothelial cell | 1.44e-20 | 3 |
mesodermal cell | 1.37e-19 | 121 |
GAG secreting cell | 4.81e-18 | 9 |
carbohydrate secreting cell | 4.81e-18 | 9 |
fibroblast of tunica adventitia of artery | 3.62e-15 | 4 |
fibroblast of the aortic adventitia | 3.62e-15 | 4 |
glomerular endothelial cell | 3.98e-12 | 5 |
extracellular matrix secreting cell | 9.41e-11 | 15 |
stromal cell | 1.15e-10 | 28 |
chondroblast | 4.15e-10 | 6 |
chondrocyte | 4.15e-10 | 6 |
synovial cell | 4.20e-10 | 3 |
fibrocyte | 7.81e-10 | 3 |
tendon cell | 7.81e-10 | 3 |
blood vessel endothelial cell | 6.25e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.25e-09 | 18 |
glomerular cell | 8.38e-09 | 7 |
kidney corpuscule cell | 8.38e-09 | 7 |
embryonic cell | 3.18e-07 | 250 |