FFCP PHASE1:Hg19::chr2:64881018..64881064,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:64881018..64881064,-
|short_description=p1@SERTAD2
|description=CAGE_peak_1_at_SERTAD2_5end
|association_with_transcript=0bp_to_ENST00000313349,NM_014755,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9792 | |EntrezGene=9792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30784 | |HGNC=30784 | ||
|TSSclassifier=strong | |||
|UniProt=Q14140 | |UniProt=Q14140 | ||
|association_with_transcript=0bp_to_ENST00000313349,NM_014755,uc002sde.1_5end | |||
|cluster_id=chr2:64881018..64881064,- | |||
|description=CAGE_peak_1_at_SERTAD2_5end | |||
|id=chr2:64881018..64881064,- | |||
|ontology_enrichment_celltype=CL:0000738!3.66e-14!140;CL:0002320!8.36e-14!365;CL:0000134!1.51e-13!358;CL:0000037!1.13e-11!172;CL:0000566!1.13e-11!172;CL:0000219!1.34e-11!390;CL:0000988!3.22e-11!182;CL:0002057!1.19e-10!42;CL:0002032!2.40e-10!165;CL:0000837!2.40e-10!165;CL:0000048!4.75e-10!430;CL:0000723!4.96e-10!436;CL:0000766!9.75e-10!76;CL:0000034!3.83e-09!444;CL:0002031!4.22e-09!124;CL:0000763!7.44e-09!112;CL:0000049!7.44e-09!112;CL:0002087!1.73e-08!119;CL:0000860!2.58e-08!45;CL:0000557!1.69e-07!71;CL:0000839!3.55e-07!70;CL:0002009!4.29e-07!65;CL:0000094!8.55e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.50e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.01e-15,136;CL:0002320,3.60e-15,361;CL:0000134,6.60e-15,354;CL:0000037,6.80e-13,168;CL:0000219,8.18e-13,386;CL:0000988,9.24e-13,177;CL:0000766,1.62e-11,72;CL:0002032,1.67e-11,161;CL:0000837,1.67e-11,161;CL:0000048,2.92e-11,427;CL:0000723,3.07e-11,433;CL:0000860,1.19e-10,42;CL:0002057,1.19e-10,42;CL:0002031,2.36e-10,120;CL:0000034,2.74e-10,441;CL:0000763,3.67e-10,108;CL:0000049,3.67e-10,108;CL:0002087,1.03e-09,115;CL:0000473,1.30e-09,48;CL:0000234,1.30e-09,48;CL:0000557,4.75e-09,67;CL:0000839,1.08e-08,66;CL:0002009,1.13e-08,61;CL:0002194,7.56e-08,59;CL:0000576,7.56e-08,59;CL:0000040,7.56e-08,59;CL:0000559,7.56e-08,59;CL:0000094,8.55e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-14!102;UBERON:0003061!1.31e-14!102;UBERON:0002384!3.33e-14!375;UBERON:0002193!4.15e-13!112;UBERON:0002371!1.32e-08!80;UBERON:0001474!6.85e-08!86;UBERON:0000178!1.60e-07!15;UBERON:0000179!1.60e-07!15;UBERON:0000463!1.60e-07!15;UBERON:0004765!3.39e-07!101;UBERON:0001434!3.39e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.39e-10;32!UBERON:0000178;1.61e-07;15!UBERON:0000179;1.61e-07;15!UBERON:0000463;1.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.50e-16,98;UBERON:0003061,1.50e-16,98;UBERON:0002384,1.40e-15,371;UBERON:0002193,8.28e-15,108;UBERON:0002371,3.47e-10,76;UBERON:0002405,7.47e-10,93;UBERON:0001474,2.60e-09,82;UBERON:0004765,6.44e-09,90;UBERON:0001434,1.41e-08,100;UBERON:0000178,1.60e-07,15;UBERON:0000179,1.60e-07,15;UBERON:0000463,1.60e-07,15;UBERON:0002204,4.91e-07,167 | |||
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| ||
|short_description=p1@SERTAD2 | |||
}} | }} |
Latest revision as of 23:50, 17 September 2015
Short description: | p1@SERTAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERTAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313349, NM_014755, uc002sde.1_5end |
EntrezGene: | SERTAD2 |
HGNC: | 30784 |
UniProt: | Q14140 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.01e-15 | 136 |
connective tissue cell | 3.60e-15 | 361 |
mesenchymal cell | 6.60e-15 | 354 |
hematopoietic stem cell | 6.80e-13 | 168 |
motile cell | 8.18e-13 | 386 |
hematopoietic cell | 9.24e-13 | 177 |
myeloid leukocyte | 1.62e-11 | 72 |
hematopoietic oligopotent progenitor cell | 1.67e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-11 | 161 |
multi fate stem cell | 2.92e-11 | 427 |
somatic stem cell | 3.07e-11 | 433 |
classical monocyte | 1.19e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-10 | 42 |
hematopoietic lineage restricted progenitor cell | 2.36e-10 | 120 |
stem cell | 2.74e-10 | 441 |
myeloid cell | 3.67e-10 | 108 |
common myeloid progenitor | 3.67e-10 | 108 |
nongranular leukocyte | 1.03e-09 | 115 |
defensive cell | 1.30e-09 | 48 |
phagocyte | 1.30e-09 | 48 |
granulocyte monocyte progenitor cell | 4.75e-09 | 67 |
myeloid lineage restricted progenitor cell | 1.08e-08 | 66 |
macrophage dendritic cell progenitor | 1.13e-08 | 61 |
monopoietic cell | 7.56e-08 | 59 |
monocyte | 7.56e-08 | 59 |
monoblast | 7.56e-08 | 59 |
promonocyte | 7.56e-08 | 59 |
granulocyte | 8.55e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.50e-16 | 98 |
blood island | 1.50e-16 | 98 |
connective tissue | 1.40e-15 | 371 |
hemolymphoid system | 8.28e-15 | 108 |
bone marrow | 3.47e-10 | 76 |
immune system | 7.47e-10 | 93 |
bone element | 2.60e-09 | 82 |
skeletal element | 6.44e-09 | 90 |
skeletal system | 1.41e-08 | 100 |
blood | 1.60e-07 | 15 |
haemolymphatic fluid | 1.60e-07 | 15 |
organism substance | 1.60e-07 | 15 |
musculoskeletal system | 4.91e-07 | 167 |