FFCP PHASE1:Hg19::chr2:7005997..7006051,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:7005997..7006051,+
|short_description=p2@RSAD2
|description=CAGE_peak_2_at_RSAD2_5end
|association_with_transcript=38bp_to_ENST00000442639_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91543 | |EntrezGene=91543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30908 | |HGNC=30908 | ||
|TSSclassifier=strong | |||
|UniProt=C9J674 | |UniProt=C9J674 | ||
|association_with_transcript=38bp_to_ENST00000442639_5end | |||
|cluster_id=chr2:7005997..7006051,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_RSAD2_5end | |||
|id=chr2:7005997..7006051,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.95e-29!42;CL:0000766!3.17e-26!76;CL:0000037!7.79e-26!172;CL:0000566!7.79e-26!172;CL:0000860!1.82e-25!45;CL:0000738!1.01e-24!140;CL:0002194!2.65e-24!63;CL:0000576!2.65e-24!63;CL:0000040!2.65e-24!63;CL:0000559!2.65e-24!63;CL:0002087!3.58e-24!119;CL:0002032!1.78e-23!165;CL:0000837!1.78e-23!165;CL:0000988!8.18e-23!182;CL:0002009!1.03e-22!65;CL:0000839!4.41e-22!70;CL:0000557!4.77e-22!71;CL:0000763!6.69e-22!112;CL:0000049!6.69e-22!112;CL:0002031!3.90e-21!124;CL:0002393!2.55e-07!9;CL:0002397!2.55e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-39;33!CL:0002057;1.09e-39;33!CL:0000576;1.51e-36;48!CL:0000473;3.74e-30;39!CL:0000234;3.74e-30;39!CL:0000766;1.68e-25;69!CL:0000763;2.31e-15;100!CL:0002087;1.09e-12;104!CL:0000738;5.23e-09;136!CL:0000094;2.18e-08;8!CL:0002393;2.43e-08;6!CL:0002397;2.43e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.20e-56,42;CL:0002057,7.20e-56,42;CL:0000766,7.10e-55,72;CL:0000473,4.10e-52,48;CL:0000234,4.10e-52,48;CL:0002194,7.87e-51,59;CL:0000576,7.87e-51,59;CL:0000040,7.87e-51,59;CL:0000559,7.87e-51,59;CL:0002009,1.30e-48,61;CL:0000557,6.57e-47,67;CL:0000839,1.40e-45,66;CL:0000763,1.45e-43,108;CL:0000049,1.45e-43,108;CL:0000738,9.97e-37,136;CL:0000037,1.15e-36,168;CL:0002087,3.36e-35,115;CL:0002032,1.18e-34,161;CL:0000837,1.18e-34,161;CL:0000988,1.62e-33,177;CL:0002031,2.18e-30,120;CL:0002393,9.83e-13,9;CL:0002397,9.83e-13,9;CL:0000134,1.90e-10,354;CL:0002320,8.39e-10,361;CL:0000094,2.80e-08,8;CL:0000219,5.06e-08,386;CL:0000034,8.60e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.02e-39;42!CL:0000049;2.14e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.20e-24!102;UBERON:0003061!8.20e-24!102;UBERON:0002193!1.02e-21!112;UBERON:0002371!1.23e-18!80;UBERON:0007023!5.80e-17!115;UBERON:0001474!4.47e-16!86;UBERON:0004765!2.24e-13!101;UBERON:0001434!2.24e-13!101;UBERON:0002405!4.99e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.39e-47,98;UBERON:0003061,6.39e-47,98;UBERON:0002371,6.13e-43,76;UBERON:0002193,3.21e-42,108;UBERON:0002405,4.63e-39,93;UBERON:0001474,1.75e-38,82;UBERON:0004765,1.77e-33,90;UBERON:0001434,9.73e-30,100;UBERON:0003081,1.86e-20,203;UBERON:0002204,1.42e-15,167;UBERON:0002384,2.15e-09,371;UBERON:0000926,1.78e-08,315;UBERON:0004120,1.78e-08,315;UBERON:0006603,1.78e-08,315 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.125542639594803,0.534893840235659,0.492603536699674,0.393553906568396,2.36018566109342,1.15148819429164,2.01260960310899,0,0,0,1.31694240986513,0,1.17440175733939,1.66198622559563,2.60707781711184,1.95309783644267,1.34349284543955,0.647787332037959,1.54545340580512,3.34415949192999,2.64513160582167,3.39617685662943,2.32429036905685,2.87817521615278,1.54853185447552,27.6184696629264,22.2859814680318,23.4117407589699,9.3081333798887,6.45484683583826,0,2.63539275359647,1.63743690034707,1.57306439111559,53.2585972725371,34.9812639512942,33.2455305415501,25.0686988141904,21.9410023383795,32.3930810404848,64.4264509755456,24.397564661719,42.3519129316991,25.6273638561878,24.5096971657495,20.1985625575758,53.2751562317365,34.6180977828311,62.976015100736,3.16882929467913,4.67729459923096,3.56419697364239,2.80821577866238,3.60424542819615,6.75047464127737,3.70516566863623,4.77400025277816,5.66258876670365,0,1.09227722252426,0,0.426730222566507,0.800791974072025,1.14950487990897,0,0.954053754535364,0.569212969109448,0.587237189370939,0,2.64342657158052,3.36305137788922,2.37045676297569,0.590129310341499,0,0.411202997999018,0,0,0.946895611469467,0,0.111410456885174,0,0.664601683750863,0.541607727530031,0.128091319725675,0.520237390239513,3.28875809207352,1.65810010671509,1.73881851441031,0.593146252648242,1.33770414044857,1.04535523804977,0.453237370790265,0.383220493601921,0.34362744548263,0.759059076058509,0.637130828648193,0,0.950452044448374,1.05402583354441,0.639933055772092,1.24930726552346,1.65744076430812,2.46338399076314,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.654895377488563,0.364295288292542,0,0.649094787309367,0.522389211897802,1.32957960518865,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0.805658634218294,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,1.15235184896,0.234321431833797,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,7.12801714369232,1.48360157567134,0,0,0,0.250237039743928,0,0.438977620880838,0,2.10333282469236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0,0,0.721832238805369,0,0.380508304469197,0,0,1.47730203652438,0,0,0,0,0.425325291727159,0,0,0,0.985326475791887,1.49682337822484,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,2.28661146104463,0.112131084345361,0.87192013766656,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,7.29742683847143,0,0,0,0,0,0.144781306667579,0,0.179060963239896,1.34502172792233,0.985153801009636,0.431255149719035,1.41177339907723,0.254094624222463,0,0.773288812777695,0,0,1.49801404789436,5.9832291840805,14.0901274568252,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,1.24060815673732,1.50999940573032,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0.410635780069046,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0.215915916102139,3.08454505380579,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0.9273691048295,0,0,0,0,0,0.193341436584244,0,0,0,0.322260734604821,0,0,0,0,0,0,0,0,0,0,4.92853728281742,0,0,0,0.143124886741991,0.744316738719335,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,12.6731014608268,0,0,0,1.13008116620243,0,0.66343897524122,3.06915619677634,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0,0,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0.43050537267123,0,0,0,1.52234282769651,0,1.13929437434833,0.714695326373367,0.411362273086194,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,0,0.144269212976445,0,0.159426272728822,0.199579371432817,0.383010740264733,0,0,1.40398589056729,3.42352018549788,0,2.50634477090067,0.338583555603207,0.321176150207399,1.21079824314629,4.25846237690326,2.74804275804612,2.45792611446766,2.23676107892416,1.50164227540718,0.390776190804081,0,0,1.08182271390393,0.33307196799782,0,0.561421621224659,1.90460633053462,0,0,0,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0.111308705022906,1.31843099381408,0,1.19548792950642,3.03912307084262,0.251932747854276,0,0.615424027305347,0,0,0.358042349351218,2.55786185113436,0.493217028184668,14.3689855408164,0,0.969332746095218,0.74214478529481,0,0,0,0.724999575434793,0,0.762760950878299,0.472775363535873,0,0,0.173624994933292,0,0.844175070377856,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0.139423744278603,0.769502585037971,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,2.66517388009317,0,0,0.498635045700469,0.225595660617181,0,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| ||
|short_description=p2@RSAD2 | |||
}} | }} |
Latest revision as of 04:43, 18 September 2015
Short description: | p2@RSAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RSAD2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 38bp_to_ENST00000442639_5end |
EntrezGene: | RSAD2 |
HGNC: | 30908 |
UniProt: | C9J674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.20e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.20e-56 | 42 |
myeloid leukocyte | 7.10e-55 | 72 |
defensive cell | 4.10e-52 | 48 |
phagocyte | 4.10e-52 | 48 |
monopoietic cell | 7.87e-51 | 59 |
monocyte | 7.87e-51 | 59 |
monoblast | 7.87e-51 | 59 |
promonocyte | 7.87e-51 | 59 |
macrophage dendritic cell progenitor | 1.30e-48 | 61 |
granulocyte monocyte progenitor cell | 6.57e-47 | 67 |
myeloid lineage restricted progenitor cell | 1.40e-45 | 66 |
myeloid cell | 1.45e-43 | 108 |
common myeloid progenitor | 1.45e-43 | 108 |
leukocyte | 9.97e-37 | 136 |
hematopoietic stem cell | 1.15e-36 | 168 |
nongranular leukocyte | 3.36e-35 | 115 |
hematopoietic oligopotent progenitor cell | 1.18e-34 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-34 | 161 |
hematopoietic cell | 1.62e-33 | 177 |
hematopoietic lineage restricted progenitor cell | 2.18e-30 | 120 |
intermediate monocyte | 9.83e-13 | 9 |
CD14-positive, CD16-positive monocyte | 9.83e-13 | 9 |
mesenchymal cell | 1.90e-10 | 354 |
connective tissue cell | 8.39e-10 | 361 |
granulocyte | 2.80e-08 | 8 |
motile cell | 5.06e-08 | 386 |
stem cell | 8.60e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.39e-47 | 98 |
blood island | 6.39e-47 | 98 |
bone marrow | 6.13e-43 | 76 |
hemolymphoid system | 3.21e-42 | 108 |
immune system | 4.63e-39 | 93 |
bone element | 1.75e-38 | 82 |
skeletal element | 1.77e-33 | 90 |
skeletal system | 9.73e-30 | 100 |
lateral plate mesoderm | 1.86e-20 | 203 |
musculoskeletal system | 1.42e-15 | 167 |
connective tissue | 2.15e-09 | 371 |
mesoderm | 1.78e-08 | 315 |
mesoderm-derived structure | 1.78e-08 | 315 |
presumptive mesoderm | 1.78e-08 | 315 |