FFCP PHASE1:Hg19::chr3:189838119..189838136,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:189838119..189838136,-
|short_description=p5@LEPREL1
|description=CAGE_peak_5_at_LEPREL1_5end
|association_with_transcript=-10bp_to_AK001580_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55214 | |EntrezGene=55214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19317 | |HGNC=19317 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVL5 | |UniProt=Q8IVL5 | ||
|association_with_transcript=-10bp_to_AK001580_5end | |||
|cluster_id=chr3:189838119..189838136,- | |||
|description=CAGE_peak_5_at_LEPREL1_5end | |||
|id=chr3:189838119..189838136,- | |||
|ontology_enrichment_celltype=CL:0000066!5.63e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.25e-24;3!CL:0000064;3.34e-24;3!CL:0000067;3.34e-24;3!CL:0005012;3.34e-24;3!CL:0002304;3.34e-24;3!CL:0000306;9.08e-18;4!CL:0002222;9.08e-18;4!CL:0002224;9.08e-18;4!CL:0000075;7.37e-10;27!CL:0000946;1.60e-09;1!CL:0000786;1.60e-09;1!CL:0002174;3.17e-09;1!CL:0000501;3.17e-09;1!CL:0000319;7.26e-09;1!CL:0000451;5.09e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.64e-24,3;CL:0000064,3.91e-24,3;CL:0000067,3.91e-24,3;CL:0005012,3.91e-24,3;CL:0002304,3.91e-24,3;CL:0000306,1.18e-17,4;CL:0002222,1.18e-17,4;CL:0002224,1.18e-17,4;CL:0000075,8.19e-10,27;CL:0000946,1.60e-09,1;CL:0000786,1.60e-09,1;CL:0000980,1.60e-09,1;CL:0002174,4.19e-09,1;CL:0000501,4.19e-09,1;CL:0000319,6.72e-09,1;CL:0000451,5.31e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.39e-07!11;UBERON:0000970!2.58e-07!20;UBERON:0001801!5.91e-07!14;UBERON:0002104!8.29e-07!21;UBERON:0000488!9.32e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;7.32e-25;11!UBERON:0001778;3.34e-24;3!UBERON:0001775;3.34e-24;3!UBERON:0001801;1.90e-19;14!UBERON:0000488;2.60e-18;4!UBERON:0010077;9.08e-18;4!UBERON:0005389;9.08e-18;4!UBERON:0000484;9.08e-18;4!UBERON:0000965;9.08e-18;4!UBERON:0001803;9.08e-18;4!UBERON:0000019;3.26e-14;19!UBERON:0000047;3.26e-14;19!UBERON:0004088;3.26e-14;19!UBERON:0010230;3.26e-14;19!UBERON:0000970;1.76e-13;20!UBERON:0002104;8.15e-13;21!UBERON:0001456;8.15e-13;21!UBERON:0002203;2.14e-12;6!UBERON:0001768;2.14e-12;6!UBERON:0002200;2.14e-12;6!UBERON:0000020;1.17e-11;23!UBERON:0001032;3.74e-11;24!UBERON:0004456;3.74e-11;24!UBERON:0007195;7.26e-09;1!UBERON:0010371;2.57e-08;31!UBERON:0006876;5.64e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,9.62e-25,11;UBERON:0001778,3.91e-24,3;UBERON:0001775,3.91e-24,3;UBERON:0001801,2.35e-19,14;UBERON:0000488,2.93e-18,4;UBERON:0010077,1.18e-17,4;UBERON:0005389,1.18e-17,4;UBERON:0000484,1.18e-17,4;UBERON:0002546,1.18e-17,4;UBERON:0000965,1.18e-17,4;UBERON:0001803,1.18e-17,4;UBERON:0003073,1.18e-17,4;UBERON:0005426,1.18e-17,4;UBERON:0000076,2.01e-15,8;UBERON:0000019,2.04e-13,20;UBERON:0000047,2.04e-13,20;UBERON:0010312,2.04e-13,20;UBERON:0004088,2.04e-13,20;UBERON:0010230,2.04e-13,20;UBERON:0003072,2.04e-13,20;UBERON:0004128,2.04e-13,20;UBERON:0003071,2.04e-13,20;UBERON:0000970,9.36e-13,21;UBERON:0002104,9.36e-13,21;UBERON:0002203,2.31e-12,6;UBERON:0001768,2.31e-12,6;UBERON:0002200,2.31e-12,6;UBERON:0001456,3.74e-12,22;UBERON:0005085,2.17e-11,31;UBERON:0000020,4.22e-11,24;UBERON:0001032,4.22e-11,24;UBERON:0004456,4.22e-11,24;UBERON:0007195,1.07e-08,1;UBERON:0006876,5.88e-07,11 | |||
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| ||
|short_description=p5@LEPREL1 | |||
}} | }} |
Latest revision as of 09:31, 17 September 2015
Short description: | p5@LEPREL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LEPREL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_AK001580_5end |
EntrezGene: | LEPREL1 |
HGNC: | 19317 |
UniProt: | Q8IVL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.64e-24 | 3 |
ciliated cell | 3.91e-24 | 3 |
ciliated epithelial cell | 3.91e-24 | 3 |
multi-ciliated epithelial cell | 3.91e-24 | 3 |
non-pigmented ciliary epithelial cell | 3.91e-24 | 3 |
crystallin accumulating cell | 1.18e-17 | 4 |
vertebrate lens cell | 1.18e-17 | 4 |
lens epithelial cell | 1.18e-17 | 4 |
columnar/cuboidal epithelial cell | 8.19e-10 | 27 |
antibody secreting cell | 1.60e-09 | 1 |
plasma cell | 1.60e-09 | 1 |
plasmablast | 1.60e-09 | 1 |
follicular cell of ovary | 4.19e-09 | 1 |
granulosa cell | 4.19e-09 | 1 |
mucus secreting cell | 6.72e-09 | 1 |
dendritic cell | 5.31e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 9.62e-25 | 11 |
ciliary epithelium | 3.91e-24 | 3 |
ciliary body | 3.91e-24 | 3 |
anterior segment of eyeball | 2.35e-19 | 14 |
atypical epithelium | 2.93e-18 | 4 |
cuboidal epithelium | 1.18e-17 | 4 |
transparent eye structure | 1.18e-17 | 4 |
simple cuboidal epithelium | 1.18e-17 | 4 |
cranial placode | 1.18e-17 | 4 |
lens of camera-type eye | 1.18e-17 | 4 |
epithelium of lens | 1.18e-17 | 4 |
lens placode | 1.18e-17 | 4 |
lens vesicle | 1.18e-17 | 4 |
external ectoderm | 2.01e-15 | 8 |
camera-type eye | 2.04e-13 | 20 |
simple eye | 2.04e-13 | 20 |
immature eye | 2.04e-13 | 20 |
ocular region | 2.04e-13 | 20 |
eyeball of camera-type eye | 2.04e-13 | 20 |
optic cup | 2.04e-13 | 20 |
optic vesicle | 2.04e-13 | 20 |
eye primordium | 2.04e-13 | 20 |
eye | 9.36e-13 | 21 |
visual system | 9.36e-13 | 21 |
vasculature of eye | 2.31e-12 | 6 |
uvea | 2.31e-12 | 6 |
vasculature of head | 2.31e-12 | 6 |
face | 3.74e-12 | 22 |
ectodermal placode | 2.17e-11 | 31 |
sense organ | 4.22e-11 | 24 |
sensory system | 4.22e-11 | 24 |
entire sense organ system | 4.22e-11 | 24 |
stroma of bone marrow | 1.07e-08 | 1 |
vasculature of organ | 5.88e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.72e-09 | 1 |