FFCP PHASE1:Hg19::chr4:38754956..38754971,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:38754956..38754971,+
|short_description=p@chr4:38754956..38754971,+
|description=CAGE_peak_at_chr4:38754956..38754971,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:38754956..38754971,+ | |||
|description=CAGE_peak_at_chr4:38754956..38754971,+ | |||
|id=chr4:38754956..38754971,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.76e-16!63;CL:0000576!1.76e-16!63;CL:0000040!1.76e-16!63;CL:0000559!1.76e-16!63;CL:0002009!1.31e-15!65;CL:0000839!1.40e-14!70;CL:0002057!2.18e-14!42;CL:0000557!2.61e-13!71;CL:0000860!7.72e-13!45;CL:0000766!1.87e-12!76;CL:0002087!3.15e-09!119;CL:0002031!2.93e-07!124;CL:0000763!3.17e-07!112;CL:0000049!3.17e-07!112;CL:0000738!5.35e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.47e-15;6!CL:0002397;1.47e-15;6!CL:0000235;1.60e-09;6!CL:0000576;6.88e-08;48!CL:0000766;5.34e-07;69!CL:0000473;6.86e-07;39!CL:0000234;6.86e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.17e-15,59;CL:0000576,1.17e-15,59;CL:0000040,1.17e-15,59;CL:0000559,1.17e-15,59;CL:0002009,4.64e-15,61;CL:0000473,7.52e-15,48;CL:0000234,7.52e-15,48;CL:0000839,1.02e-13,66;CL:0000557,1.79e-13,67;CL:0000766,2.37e-12,72;CL:0002393,2.40e-10,9;CL:0002397,2.40e-10,9;CL:0000235,1.47e-09,6;CL:0000860,1.85e-09,42;CL:0002057,1.85e-09,42;CL:0000763,1.38e-08,108;CL:0000049,1.38e-08,108;CL:0002087,9.88e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.33e-07;42!UBERON:0010115;7.55e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.69e-35!115;UBERON:0001049!7.20e-17!57;UBERON:0005068!7.20e-17!57;UBERON:0006241!7.20e-17!57;UBERON:0007135!7.20e-17!57;UBERON:0002390!3.40e-15!102;UBERON:0003061!3.40e-15!102;UBERON:0001017!1.68e-13!82;UBERON:0002346!2.53e-13!90;UBERON:0002193!2.76e-13!112;UBERON:0002780!2.93e-13!41;UBERON:0001890!2.93e-13!41;UBERON:0006240!2.93e-13!41;UBERON:0002616!2.95e-13!59;UBERON:0005743!3.06e-13!86;UBERON:0003075!5.72e-13!86;UBERON:0007284!5.72e-13!86;UBERON:0003080!9.40e-13!42;UBERON:0001893!9.00e-12!34;UBERON:0002020!1.16e-11!34;UBERON:0003528!1.16e-11!34;UBERON:0002371!2.03e-11!80;UBERON:0000955!2.91e-11!69;UBERON:0006238!2.91e-11!69;UBERON:0002791!4.32e-11!33;UBERON:0001474!4.35e-11!86;UBERON:0000073!7.95e-11!94;UBERON:0001016!7.95e-11!94;UBERON:0002619!1.59e-10!22;UBERON:0001869!5.06e-10!32;UBERON:0003056!2.45e-09!61;UBERON:0004765!3.44e-09!101;UBERON:0001434!3.44e-09!101;UBERON:0002405!6.16e-09!115;UBERON:0000956!9.59e-09!25;UBERON:0000203!9.59e-09!25;UBERON:0001950!1.05e-08!20;UBERON:0000062!1.61e-08!511;UBERON:0000922!3.43e-08!612;UBERON:0000923!5.69e-08!604;UBERON:0005291!5.69e-08!604;UBERON:0006598!5.69e-08!604;UBERON:0002532!5.69e-08!604;UBERON:0002050!6.78e-08!605;UBERON:0005423!6.78e-08!605;UBERON:0000153!6.40e-07!129;UBERON:0007811!6.40e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;9.11e-11;4!UBERON:0002114;2.59e-08;2!UBERON:0002146;2.81e-07;1!UBERON:0005623;2.81e-07;1!UBERON:0002363;7.55e-07;1!UBERON:0002336;7.55e-07;1!UBERON:0003112;7.55e-07;1!UBERON:0001301;7.55e-07;1!UBERON:0002171;7.55e-07;1!UBERON:0004913;7.55e-07;1!UBERON:0011215;7.55e-07;1!UBERON:0001018;7.55e-07;1!UBERON:0003703;7.55e-07;1!UBERON:0011158;7.55e-07;1!UBERON:0006518;7.55e-07;1!UBERON:0008949;7.55e-07;1!UBERON:0002473;7.55e-07;1!UBERON:0005340;7.55e-07;1!UBERON:0003544;7.55e-07;1!UBERON:0005970;7.55e-07;1!UBERON:0002316;7.55e-07;1!UBERON:0001020;7.55e-07;1!UBERON:0000101;7.55e-07;1!UBERON:0003128;7.55e-07;1!UBERON:0002167;7.55e-07;1!UBERON:0002437;7.55e-07;1!UBERON:0001703;7.55e-07;1!UBERON:0002241;7.55e-07;1!UBERON:0001174;7.55e-07;1!UBERON:0004914;7.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.47e-11,76;UBERON:0002108,7.01e-11,4;UBERON:0001474,1.62e-10,82;UBERON:0002390,1.07e-09,98;UBERON:0003061,1.07e-09,98;UBERON:0001434,1.73e-09,100;UBERON:0004765,2.42e-09,90;UBERON:0002405,5.92e-09,93;UBERON:0002193,1.58e-08,108;UBERON:0002114,1.93e-08,2;UBERON:0002146,3.36e-07,1;UBERON:0005623,3.36e-07,1;UBERON:0002336,3.57e-07,1;UBERON:0011215,3.57e-07,1;UBERON:0001018,3.57e-07,1;UBERON:0002473,3.57e-07,1;UBERON:0005340,3.57e-07,1;UBERON:0003544,3.57e-07,1;UBERON:0005970,3.57e-07,1;UBERON:0002316,3.57e-07,1;UBERON:0001020,3.57e-07,1;UBERON:0002437,3.57e-07,1;UBERON:0002171,4.51e-07,1;UBERON:0006518,4.51e-07,1;UBERON:0008949,4.51e-07,1;UBERON:0000101,4.51e-07,1;UBERON:0002167,4.51e-07,1;UBERON:0001301,5.06e-07,1;UBERON:0003112,6.02e-07,1;UBERON:0011158,6.02e-07,1;UBERON:0003128,6.02e-07,1;UBERON:0001703,6.02e-07,1;UBERON:0002241,6.02e-07,1;UBERON:0004761,6.02e-07,1;UBERON:0009617,6.02e-07,1;UBERON:0004913,7.57e-07,1;UBERON:0003703,7.57e-07,1;UBERON:0001174,7.57e-07,1;UBERON:0004914,7.57e-07,1;UBERON:0002363,8.02e-07,1;UBERON:0007645,8.02e-07,1;UBERON:0007647,8.02e-07,1;UBERON:0010115,8.02e-07,1 | |||
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|short_description=p@chr4:38754956..38754971,+ | |||
}} | }} |
Latest revision as of 04:59, 30 July 2015
Short description: | p@chr4:38754956..38754971, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:38754956..38754971, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.17e-15 | 59 |
monocyte | 1.17e-15 | 59 |
monoblast | 1.17e-15 | 59 |
promonocyte | 1.17e-15 | 59 |
macrophage dendritic cell progenitor | 4.64e-15 | 61 |
defensive cell | 7.52e-15 | 48 |
phagocyte | 7.52e-15 | 48 |
myeloid lineage restricted progenitor cell | 1.02e-13 | 66 |
granulocyte monocyte progenitor cell | 1.79e-13 | 67 |
myeloid leukocyte | 2.37e-12 | 72 |
intermediate monocyte | 2.40e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.40e-10 | 9 |
macrophage | 1.47e-09 | 6 |
classical monocyte | 1.85e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-09 | 42 |
myeloid cell | 1.38e-08 | 108 |
common myeloid progenitor | 1.38e-08 | 108 |
nongranular leukocyte | 9.88e-07 | 115 |