FFCP PHASE1:Hg19::chr4:86396321..86396392,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:86396321..86396392,+
|short_description=p2@ARHGAP24
|description=CAGE_peak_2_at_ARHGAP24_5end
|association_with_transcript=0bp_to_ENST00000503995_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503995_5end | |||
|cluster_id=chr4:86396321..86396392,+ | |||
|description=CAGE_peak_2_at_ARHGAP24_5end | |||
|id=chr4:86396321..86396392,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.55e-12!75;CL:0002057!3.13e-11!42;CL:0000055!3.31e-10!180;CL:0000860!2.38e-09!45;CL:0002620!2.99e-08!23;CL:0000766!6.32e-08!76;CL:0002194!2.03e-07!63;CL:0000576!2.03e-07!63;CL:0000040!2.03e-07!63;CL:0000559!2.03e-07!63;CL:0002009!5.25e-07!65;CL:0000048!6.12e-07!430;CL:0000136!6.38e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-09;33!CL:0002057;4.46e-09;33!CL:0002620;9.29e-09;23!CL:0000576;2.32e-08;48!CL:0000473;1.37e-07;39!CL:0000234;1.37e-07;39!CL:0000136;9.49e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.94e-13,76;CL:0000860,3.12e-12,42;CL:0002057,3.12e-12,42;CL:0000473,1.34e-11,48;CL:0000234,1.34e-11,48;CL:0000766,6.31e-10,72;CL:0000048,1.40e-09,427;CL:0002194,1.81e-09,59;CL:0000576,1.81e-09,59;CL:0000040,1.81e-09,59;CL:0000559,1.81e-09,59;CL:0002009,4.57e-09,61;CL:0002620,6.05e-09,23;CL:0000723,8.33e-09,433;CL:0000034,1.06e-07,441;CL:0000136,1.77e-07,15;CL:0002320,1.79e-07,361;CL:0000134,3.37e-07,354;CL:0000557,4.62e-07,67;CL:0000839,9.92e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;5.83e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.26e-09!167;UBERON:0003102!9.28e-09!95;UBERON:0000468!1.13e-08!659;UBERON:0004290!1.76e-07!70;UBERON:0000914!4.02e-07!83;UBERON:0002329!4.02e-07!83;UBERON:0003077!4.02e-07!83;UBERON:0003059!4.02e-07!83;UBERON:0007282!4.02e-07!83;UBERON:0009618!4.02e-07!83;UBERON:0007285!4.02e-07!83;UBERON:0000467!5.11e-07!625;UBERON:0000480!8.12e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.30e-08;31!UBERON:0001015;2.30e-08;31!UBERON:0000383;2.30e-08;31!UBERON:0001134;6.77e-08;16!UBERON:0002036;6.77e-08;16!UBERON:0007100;6.96e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.77e-11,315;UBERON:0004120,2.77e-11,315;UBERON:0006603,2.77e-11,315;UBERON:0002204,2.25e-10,167;UBERON:0002390,6.02e-08,98;UBERON:0003061,6.02e-08,98;UBERON:0002329,7.75e-08,71;UBERON:0003059,7.75e-08,71;UBERON:0007282,7.75e-08,71;UBERON:0004290,7.75e-08,71;UBERON:0009618,7.75e-08,71;UBERON:0002384,1.38e-07,371;UBERON:0003077,1.74e-07,72;UBERON:0007285,1.74e-07,72;UBERON:0007524,2.15e-07,73;UBERON:0003102,2.62e-07,99;UBERON:0000479,2.87e-07,773;UBERON:0002193,4.10e-07,108 | |||
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| ||
|short_description=p2@ARHGAP24 | |||
}} | }} |
Latest revision as of 03:21, 19 September 2015
Short description: | p2@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGAP24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503995_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.94e-13 | 76 |
classical monocyte | 3.12e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.12e-12 | 42 |
defensive cell | 1.34e-11 | 48 |
phagocyte | 1.34e-11 | 48 |
myeloid leukocyte | 6.31e-10 | 72 |
multi fate stem cell | 1.40e-09 | 427 |
monopoietic cell | 1.81e-09 | 59 |
monocyte | 1.81e-09 | 59 |
monoblast | 1.81e-09 | 59 |
promonocyte | 1.81e-09 | 59 |
macrophage dendritic cell progenitor | 4.57e-09 | 61 |
skin fibroblast | 6.05e-09 | 23 |
somatic stem cell | 8.33e-09 | 433 |
stem cell | 1.06e-07 | 441 |
fat cell | 1.77e-07 | 15 |
connective tissue cell | 1.79e-07 | 361 |
mesenchymal cell | 3.37e-07 | 354 |
granulocyte monocyte progenitor cell | 4.62e-07 | 67 |
myeloid lineage restricted progenitor cell | 9.92e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.77e-11 | 315 |
mesoderm-derived structure | 2.77e-11 | 315 |
presumptive mesoderm | 2.77e-11 | 315 |
musculoskeletal system | 2.25e-10 | 167 |
hematopoietic system | 6.02e-08 | 98 |
blood island | 6.02e-08 | 98 |
somite | 7.75e-08 | 71 |
presomitic mesoderm | 7.75e-08 | 71 |
presumptive segmental plate | 7.75e-08 | 71 |
dermomyotome | 7.75e-08 | 71 |
trunk paraxial mesoderm | 7.75e-08 | 71 |
connective tissue | 1.38e-07 | 371 |
paraxial mesoderm | 1.74e-07 | 72 |
presumptive paraxial mesoderm | 1.74e-07 | 72 |
dense mesenchyme tissue | 2.15e-07 | 73 |
surface structure | 2.62e-07 | 99 |
tissue | 2.87e-07 | 773 |
hemolymphoid system | 4.10e-07 | 108 |