FFCP PHASE1:Hg19::chr4:87968291..87968314,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:87968291..87968314,+
|short_description=p14@AFF1
|description=CAGE_peak_14_at_AFF1_5end
|association_with_transcript=0bp_to_AF177238,AF177239_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4299 | |EntrezGene=4299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7135 | |HGNC=7135 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AF177238,AF177239_5end | |||
|cluster_id=chr4:87968291..87968314,+ | |||
|description=CAGE_peak_14_at_AFF1_5end | |||
|id=chr4:87968291..87968314,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.17e-10!76;CL:0000839!2.92e-09!70;CL:0000763!3.94e-09!112;CL:0000049!3.94e-09!112;CL:0000557!6.00e-09!71;CL:0002009!1.48e-07!65;CL:0002194!3.04e-07!63;CL:0000576!3.04e-07!63;CL:0000040!3.04e-07!63;CL:0000559!3.04e-07!63;CL:0000860!6.22e-07!45;CL:0002057!7.82e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-09;33!CL:0002057;1.09e-09;33!CL:0000473;5.05e-09;39!CL:0000234;5.05e-09;39!CL:0000097;6.65e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.55e-13,72;CL:0000557,2.46e-11,67;CL:0000839,8.72e-11,66;CL:0000763,6.45e-10,108;CL:0000049,6.45e-10,108;CL:0000473,1.37e-09,48;CL:0000234,1.37e-09,48;CL:0002009,1.51e-08,61;CL:0000860,2.27e-08,42;CL:0002057,2.27e-08,42;CL:0002194,2.60e-08,59;CL:0000576,2.60e-08,59;CL:0000040,2.60e-08,59;CL:0000559,2.60e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;4.48e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-19!115;UBERON:0002390!2.63e-07!102;UBERON:0003061!2.63e-07!102;UBERON:0002193!2.82e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;9.07e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.82e-18,114;UBERON:0002371,7.20e-09,76;UBERON:0002390,7.70e-09,98;UBERON:0003061,7.70e-09,98;UBERON:0002193,3.82e-08,108;UBERON:0003135,4.84e-08,11;UBERON:0001474,1.45e-07,82;UBERON:0002405,2.86e-07,93 | |||
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| ||
|short_description=p14@AFF1 | |||
}} | }} |
Latest revision as of 05:09, 19 September 2015
Short description: | p14@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_AFF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF177238, AF177239_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.55e-13 | 72 |
granulocyte monocyte progenitor cell | 2.46e-11 | 67 |
myeloid lineage restricted progenitor cell | 8.72e-11 | 66 |
myeloid cell | 6.45e-10 | 108 |
common myeloid progenitor | 6.45e-10 | 108 |
defensive cell | 1.37e-09 | 48 |
phagocyte | 1.37e-09 | 48 |
macrophage dendritic cell progenitor | 1.51e-08 | 61 |
classical monocyte | 2.27e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.27e-08 | 42 |
monopoietic cell | 2.60e-08 | 59 |
monocyte | 2.60e-08 | 59 |
monoblast | 2.60e-08 | 59 |
promonocyte | 2.60e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.82e-18 | 114 |
bone marrow | 7.20e-09 | 76 |
hematopoietic system | 7.70e-09 | 98 |
blood island | 7.70e-09 | 98 |
hemolymphoid system | 3.82e-08 | 108 |
male reproductive organ | 4.84e-08 | 11 |
bone element | 1.45e-07 | 82 |
immune system | 2.86e-07 | 93 |