FFCP PHASE1:Hg19::chr5:167247199..167247212,+: Difference between revisions
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|id=chr5:167247199..167247212,+
|short_description=p@chr5:167247199..167247212,+
|description=CAGE_peak_at_chr5:167247199..167247212,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:167247199..167247212,+ | |||
|coexpression_cluster_id=C592 | |||
|description=CAGE_peak_at_chr5:167247199..167247212,+ | |||
|id=chr5:167247199..167247212,+ | |||
|ontology_enrichment_celltype=CL:0002159!4.46e-25!13;CL:0002076!1.34e-23!43;CL:0002368!1.73e-19!13;CL:0000223!4.52e-16!59;CL:0000362!3.24e-13!8;CL:0002621!3.25e-13!3;CL:0002077!4.94e-13!33;CL:0000240!1.20e-11!6;CL:0000311!1.20e-11!6;CL:0000079!1.20e-11!6;CL:0000237!1.20e-11!6;CL:0000036!1.20e-11!6;CL:0000357!1.20e-11!6;CL:0000114!1.20e-11!6;CL:0000317!1.48e-09!2;CL:1000448!1.48e-09!2;CL:0002308!1.48e-09!2;CL:0002140!1.48e-09!2;CL:0000575!2.14e-09!2;CL:0000066!4.78e-09!254;CL:0002251!1.16e-08!21;CL:0000312!2.85e-08!5;CL:0000622!5.58e-08!5;CL:0002202!1.86e-07!9;CL:0002632!1.86e-07!9;CL:0000220!4.79e-07!246;CL:0002321!6.13e-07!248;CL:0002166!9.61e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.45e-56;14!CL:0000362;9.46e-28;9!CL:0000240;4.89e-27;6!CL:0000311;4.89e-27;6!CL:0000079;4.89e-27;6!CL:0000237;4.89e-27;6!CL:0002368;5.08e-27;13!CL:0002076;1.98e-21;42!CL:0000317;5.20e-21;2!CL:1000448;5.20e-21;2!CL:0002308;5.20e-21;2!CL:0002140;5.20e-21;2!CL:0000575;1.74e-20;2!CL:0002077;1.76e-20;34!CL:0000312;1.06e-18;5!CL:0002166;1.56e-14;3!CL:0002621;1.98e-14;3!CL:0002336;1.87e-11;1!CL:0002261;1.87e-11;1!CL:0002170;1.87e-11;1!CL:0000622;5.71e-09;5!CL:0000154;1.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.99e-56,14;CL:0000362,1.29e-27,9;CL:0002368,3.96e-27,13;CL:0000240,6.84e-27,6;CL:0000311,6.84e-27,6;CL:0000079,6.84e-27,6;CL:0000237,6.84e-27,6;CL:0000036,6.84e-27,6;CL:0000357,6.84e-27,6;CL:0000114,6.84e-27,6;CL:0002077,1.51e-22,34;CL:0002076,3.03e-22,42;CL:0000317,6.37e-21,2;CL:1000448,6.37e-21,2;CL:0002308,6.37e-21,2;CL:0002140,6.37e-21,2;CL:0000575,1.57e-20,2;CL:0000312,1.31e-18,5;CL:0000223,9.90e-16,58;CL:0002166,1.41e-14,3;CL:0002621,1.98e-14,3;CL:0000066,3.85e-13,253;CL:0000221,4.65e-12,72;CL:0002321,1.23e-11,250;CL:0002336,2.18e-11,1;CL:0002261,2.18e-11,1;CL:0002170,2.18e-11,1;CL:0000076,3.79e-09,63;CL:0000622,6.19e-09,5;CL:0000154,1.38e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;4.89e-27;6!CL:0000114;4.89e-27;6!CL:0000223;4.17e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!3.25e-13!3;UBERON:0001004!2.48e-12!72;UBERON:0003102!1.39e-09!95;UBERON:0002419!1.48e-09!2;UBERON:0007771!1.48e-09!2;UBERON:0003297!1.48e-09!2;UBERON:0001821!1.48e-09!2;UBERON:0003487!1.48e-09!2;UBERON:0001820!1.48e-09!2;UBERON:0005089!1.48e-09!2;UBERON:0005088!1.48e-09!2;UBERON:0000065!1.42e-08!53;UBERON:0004807!4.85e-08!28;UBERON:0001444!7.32e-08!48;UBERON:0005085!1.29e-07!29;UBERON:0001003!2.15e-07!14;UBERON:0007376!2.15e-07!14;UBERON:0007383!2.15e-07!14;UBERON:0004119!4.53e-07!169;UBERON:0000925!4.53e-07!169;UBERON:0006595!4.53e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.20e-21;2!UBERON:0007771;5.20e-21;2!UBERON:0003297;5.20e-21;2!UBERON:0001821;5.20e-21;2!UBERON:0003487;5.20e-21;2!UBERON:0001820;5.20e-21;2!UBERON:0001003;1.20e-16;15!UBERON:0007376;1.20e-16;15!UBERON:0010371;6.34e-15;31!UBERON:0001949;1.98e-14;3!UBERON:0001708;3.92e-11;4!UBERON:0008895;3.92e-11;4!UBERON:0000964;9.89e-11;4!UBERON:0010409;9.89e-11;4!UBERON:0011159;4.40e-09;5!UBERON:0000065;1.68e-08;44!UBERON:0003729;1.52e-07;13!UBERON:0004807;1.52e-07;22!UBERON:0003102;5.61e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,6.37e-21,2;UBERON:0007771,6.37e-21,2;UBERON:0003297,6.37e-21,2;UBERON:0001821,6.37e-21,2;UBERON:0003487,6.37e-21,2;UBERON:0001820,6.37e-21,2;UBERON:0005089,6.37e-21,2;UBERON:0005088,6.37e-21,2;UBERON:0001003,1.44e-16,15;UBERON:0007376,1.44e-16,15;UBERON:0007383,1.44e-16,15;UBERON:0003102,5.23e-15,99;UBERON:0001949,1.98e-14,3;UBERON:0001708,3.64e-11,4;UBERON:0008895,3.64e-11,4;UBERON:0000964,9.42e-11,4;UBERON:0010409,9.42e-11,4;UBERON:0004348,9.42e-11,4;UBERON:0005427,9.42e-11,4;UBERON:0001004,9.03e-10,74;UBERON:0011159,4.15e-09,5;UBERON:0000065,2.12e-08,54;UBERON:0000033,4.49e-08,56;UBERON:0010188,9.90e-08,6;UBERON:0002539,9.90e-08,6;UBERON:0008816,9.90e-08,6;UBERON:0003729,1.57e-07,13;UBERON:0000153,3.18e-07,62;UBERON:0007811,3.18e-07,62 | |||
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| ||
|short_description=p@chr5:167247199..167247212,+ | |||
}} | }} |
Latest revision as of 12:43, 30 July 2015
Short description: | p@chr5:167247199..167247212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167247199..167247212, + |
Coexpression cluster: | C592_Sebocyte_Small_Keratinocyte_Gingival_Mallassezderived_oral_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 6.37e-21 | 2 |
epidermis gland | 6.37e-21 | 2 |
gland of integumental system | 6.37e-21 | 2 |
sebaceous gland | 6.37e-21 | 2 |
skin sebaceous gland | 6.37e-21 | 2 |
sweat gland | 6.37e-21 | 2 |
sweat gland placode | 6.37e-21 | 2 |
sebaceous gland placode | 6.37e-21 | 2 |
skin epidermis | 1.44e-16 | 15 |
outer epithelium | 1.44e-16 | 15 |
enveloping layer of ectoderm | 1.44e-16 | 15 |
surface structure | 5.23e-15 | 99 |
gingival epithelium | 1.98e-14 | 3 |
jaw skeleton | 3.64e-11 | 4 |
splanchnocranium | 3.64e-11 | 4 |
cornea | 9.42e-11 | 4 |
eye surface | 9.42e-11 | 4 |
optic eminence | 9.42e-11 | 4 |
corneal primordium | 9.42e-11 | 4 |
respiratory system | 9.03e-10 | 74 |
primary subdivision of cranial skeletal system | 4.15e-09 | 5 |
respiratory tract | 2.12e-08 | 54 |
head | 4.49e-08 | 56 |
protuberance | 9.90e-08 | 6 |
pharyngeal arch | 9.90e-08 | 6 |
embryonic head | 9.90e-08 | 6 |
mouth mucosa | 1.57e-07 | 13 |
anterior region of body | 3.18e-07 | 62 |
craniocervical region | 3.18e-07 | 62 |