FFCP PHASE1:Hg19::chr6:30131318..30131342,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:30131318..30131342,+
|short_description=p1@TRIM15
|description=CAGE_peak_1_at_TRIM15_5end
|association_with_transcript=-119bp_to_ENST00000376688_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89870 | |EntrezGene=89870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16284 | |HGNC=16284 | ||
|TSSclassifier=strong | |||
|UniProt=A6NL11 | |UniProt=A6NL11 | ||
|association_with_transcript=-119bp_to_ENST00000376688_5end | |||
|cluster_id=chr6:30131318..30131342,+ | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_1_at_TRIM15_5end | |||
|id=chr6:30131318..30131342,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.84e-13!12;CL:0000417!4.84e-13!12;CL:0000668!4.84e-13!12;CL:0000414!4.84e-13!12;CL:0000412!4.84e-13!12;CL:0000182!4.84e-13!12;CL:0002178!1.11e-09!3;CL:0000223!6.34e-09!59;CL:0000764!1.46e-07!2;CL:0000765!1.46e-07!2;CL:0000050!1.46e-07!2;CL:0000038!1.46e-07!2;CL:0000558!1.46e-07!2;CL:0000547!1.46e-07!2;CL:0000549!1.46e-07!2;CL:0000550!1.46e-07!2;CL:0000552!1.46e-07!2;CL:1000415!3.06e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.02e-14;12!CL:0000764;2.38e-14;2!CL:0000558;2.38e-14;2!CL:0002563;8.10e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-14,12;CL:0000764,2.73e-14,2;CL:0000765,2.73e-14,2;CL:0000050,2.73e-14,2;CL:0000038,2.73e-14,2;CL:0000558,2.73e-14,2;CL:0000547,2.73e-14,2;CL:0000549,2.73e-14,2;CL:0000550,2.73e-14,2;CL:0000552,2.73e-14,2;CL:0000223,2.10e-08,58;CL:0002563,7.70e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.29e-22;11!UBERON:0009497;4.59e-19;13!UBERON:0003104;4.44e-13;31!UBERON:0006242;1.75e-08;1!UBERON:0001045;4.11e-08;1 | |||
|ontology_enrichment_disease=DOID:3119!4.73e-10!14;DOID:299!1.02e-08!25;DOID:3493!2.53e-07!2;DOID:4929!3.16e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.43e-45,17;UBERON:0005409,1.96e-30,25;UBERON:0009854,5.79e-23,23;UBERON:0002108,8.22e-23,4;UBERON:0000059,3.24e-22,11;UBERON:0009497,3.73e-21,25;UBERON:0000015,3.73e-21,25;UBERON:0002423,3.73e-21,25;UBERON:0006235,3.73e-21,25;UBERON:0004161,3.73e-21,25;UBERON:0009856,3.72e-20,26;UBERON:0001155,3.33e-19,9;UBERON:0008835,4.15e-19,22;UBERON:0003894,4.15e-19,22;UBERON:0004921,1.81e-17,118;UBERON:0002107,2.78e-17,19;UBERON:0006925,2.78e-17,19;UBERON:0008836,2.78e-17,19;UBERON:0007499,1.10e-16,25;UBERON:0003929,2.55e-16,54;UBERON:0001007,2.85e-15,145;UBERON:0001555,2.85e-15,145;UBERON:0007026,2.85e-15,145;UBERON:0004119,1.74e-13,160;UBERON:0000925,1.74e-13,160;UBERON:0006595,1.74e-13,160;UBERON:0004907,8.14e-13,5;UBERON:0002365,2.84e-10,31;UBERON:0002330,2.84e-10,31;UBERON:0005911,5.37e-10,82;UBERON:0002114,5.42e-10,2;UBERON:0005172,4.70e-09,54;UBERON:0005173,4.70e-09,54;UBERON:0002368,5.29e-09,35;UBERON:0011216,1.93e-08,223;UBERON:0001154,4.41e-08,1;UBERON:0001153,4.41e-08,1;UBERON:0001045,4.41e-08,1;UBERON:0002417,5.21e-08,60;UBERON:0000916,5.21e-08,60;UBERON:0004913,6.68e-08,1;UBERON:0003703,6.68e-08,1;UBERON:0001174,6.68e-08,1;UBERON:0004914,6.68e-08,1;UBERON:0001242,7.70e-08,4;UBERON:0001262,7.70e-08,4;UBERON:0004786,7.70e-08,4;UBERON:0004808,7.70e-08,4;UBERON:0001277,7.70e-08,4;UBERON:0001052,9.46e-08,4;UBERON:0000949,8.14e-07,45 | |||
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| ||
|short_description=p1@TRIM15 | |||
}} | }} |
Latest revision as of 15:55, 17 September 2015
Short description: | p1@TRIM15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM15_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | -119bp_to_ENST00000376688_5end |
EntrezGene: | TRIM15 |
HGNC: | 16284 |
UniProt: | A6NL11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.00e-14 | 12 |
erythroid lineage cell | 2.73e-14 | 2 |
erythroblast | 2.73e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 2.73e-14 | 2 |
erythroid progenitor cell | 2.73e-14 | 2 |
reticulocyte | 2.73e-14 | 2 |
proerythroblast | 2.73e-14 | 2 |
basophilic erythroblast | 2.73e-14 | 2 |
polychromatophilic erythroblast | 2.73e-14 | 2 |
orthochromatic erythroblast | 2.73e-14 | 2 |
endodermal cell | 2.10e-08 | 58 |
intestinal epithelial cell | 7.70e-08 | 4 |