FFCP PHASE1:Hg19::chr6:7578682..7578706,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:7578682..7578706,+
|short_description=p@chr6:7578682..7578706,+
|description=CAGE_peak_at_chr6:7578682..7578706,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:7578682..7578706,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7578682..7578706,+ | |||
|id=chr6:7578682..7578706,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.92e-31!254;CL:0000223!2.53e-16!59;CL:0002076!4.10e-15!43;CL:0002251!2.13e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;1.41e-09;20!CL:0000039;2.64e-09;7!CL:0000586;2.64e-09;7!CL:0002076;1.18e-08;42!CL:0000622;6.44e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-21,253;CL:0000223,8.96e-13,58;CL:0002076,4.19e-11,42;CL:0002251,1.07e-09,20;CL:0000039,1.24e-09,7;CL:0000586,1.24e-09,7;CL:0000622,6.92e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000223;5.45e-08;58 | |||
|ontology_enrichment_disease=DOID:305!9.03e-21!106;DOID:0050687!1.04e-14!143;DOID:162!1.68e-07!235;DOID:14566!9.30e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.78e-13,106;DOID:0050687,3.33e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.54e-14!169;UBERON:0000925!2.54e-14!169;UBERON:0006595!2.54e-14!169;UBERON:0001007!1.27e-11!155;UBERON:0001555!1.27e-11!155;UBERON:0007026!1.27e-11!155;UBERON:0001004!3.20e-11!72;UBERON:0000077!7.48e-10!130;UBERON:0004921!7.57e-10!129;UBERON:0004185!7.57e-10!129;UBERON:0001041!2.40e-09!98;UBERON:0000062!7.70e-08!511;UBERON:0000466!9.81e-08!126;UBERON:0000065!1.16e-07!53;UBERON:0000464!3.85e-07!104;UBERON:0000166!4.38e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.11e-08;9!UBERON:0001557;8.11e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.74e-08,160;UBERON:0000925,3.74e-08,160;UBERON:0006595,3.74e-08,160;UBERON:0001737,4.13e-08,9;UBERON:0001004,1.01e-07,74;UBERON:0004921,6.15e-07,118;UBERON:0001041,8.25e-07,87 | |||
|phase1_expression=0.363356758541113,2.5692062866918,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0,0.697801167972428,0,1.05506791291381,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.886917589850256,0.614843499851882,0.130979075497713,1.09288586487763,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70843440283719,0,0,0,0,0,0,0,0,0,0,1.74437620857014,4.47274756525787,0.12663051166458,0,0,0.709336764396714,0,0,2.4666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,1.23633464639278,0,0,0,0,0,0,0,0,0.226864366320042,1.4351170855109,0.427114777637135,0,0.900273288253207,0.309157587715317,2.06112432036503,0.18611685633159,0.675105328965065,0.292311015483596,1.00973509697646,0.276149695926898,0.484938170456436,2.84007674013291,0.201504196455281,0.339121184620975,0.773043412653187,1.63647672354501,0.573609190778008,0.731842236777572,1.19276791489337,0.813357600086629,0.829288440122964,3.02785021050754,0.36497735907583,0,0.643240938192885,0,0.928735856063958,0.721879481669586,1.41968160047813,1.85443159085912,2.41011029883482,2.31617342738027,1.96091499683166,1.66089433377768,2.69662616320329,2.15843611637881,0.769494313892781,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,1.35287282397425,0.171567810298526,6.25576626829166,0,8.84654957222351,7.87001783847502,0,0,0,0.115930404975077,0.352226082707465,0,0.462985512576611,1.71228737011138,0,0,0,0,0,0,3.86358894857377,3.40260233381728,4.56748465784526,8.13775027839093,1.91691339582606,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.99972991182057,0,0,0,3.59437283237374,3.44585807502342,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,4.78332981520856,4.46072471992904,4.25796520591624,1.7571212248907,0,0,0,2.65690239414175,0.184369168541703,0,0,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0.496215615637554,3.52962538562544,2.24528075546459,0.256278298511402,2.04682899626681,1.76939313257968,0,0.462629081407967,0.355123450626254,0.0821271560138091,0,0.348631135379878,3.2632051389738,3.20810352485256,22.191518333551,0,0,0,0.451199612907412,1.84836809050595,0.784349769176855,0,1.58327443339314,0,0,0.863663664408557,0,1.08378575017541,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,1.30151357865721,0.515205058238611,0,0,1.14853107599234,3.90036147621913,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,2.80984356113663,3.65161127993702,0.638063562472921,5.0578890427775,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.196498082026242,0,0,0.633322905892992,0,0,0,0.577332676353072,0,3.26672954583968,0.941438007767792,0.43050537267123,0,3.10401107475673,6.43225520579487,0,0,0,0,0,0,0,0,1.06824071127473,0,4.16568367167754,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0.284136146806413,2.14870036263921,0,13.207910190267,0.994147647766298,0.140669416410513,0.333926115068718,0,0,0,0.552567831062295,11.840839149151,0.409074730008619,0,0.933118762985422,0.449341755736634,1.43216939740487,0,0,0,1.11136990144637,0,0.185536196323703,0,3.1251331330228,0.0874599999961957,0,1.2517279311405,1.01701460117107,9.69189495248539,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0.435753854075961,3.62501735124369,1.38510465306835,0,1.38338342632836,8.61673386333812,12.2771530271869,5.10401855571071,0.274792780205587,13.3258694004659,0,0,0,0,0,0,0,0,1.68798451622422,0.163232808159148,0.565412285735763,0.432777279484182,0,0.353830258013357,0,0,0,0,0,0,0,0,1.56531695145672,0,0.789168805698781,3.62972148145992,0,0.31593289814244,0.150323419414493,0.103688191397247,0,0,0,0,0.853828638089378,0,7.46306874841063,2.6457947301882,0.783532859223623,0.17472666824203,0,0.387025325156341,1.09633975629278,0.656923656425674,5.23740689037465,0,1.58186518546373,0.137041924646751,0,0,0.977756913674015,0.400794101257669,0.640358984218058,4.19600180122473,5.61952626901013,0.572682980829578,2.74551996579143,0.14405479798815,0.49701014226173,10.370537523139,0.543616824294456,0,0,0,0,0,0,1.28929632425987,0,1.39641200636127,5.04152932825704,0,7.98716001995964,3.004582336956,0.669514372325618,0.671834724867263,0,0,2.75741138075283,3.46146605200899,4.31382680666783,0.295282444544246,0,0,0,1.12527203925513,0.550157746388935,1.66176135211674,0.449947783103001,0,0,1.67717343799633,0.709251365692784,0.104909176269996,0.316801009558219,0,0.383830394638891,5.71756261098694,2.64836788146173,0,0,0,0,0,0,0.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| ||
|short_description=p@chr6:7578682..7578706,+ | |||
}} | }} |
Latest revision as of 03:10, 31 July 2015
Short description: | p@chr6:7578682..7578706, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7578682..7578706, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.26e-21 | 253 |
endodermal cell | 8.96e-13 | 58 |
endo-epithelial cell | 4.19e-11 | 42 |
epithelial cell of alimentary canal | 1.07e-09 | 20 |
germ line cell | 1.24e-09 | 7 |
germ cell | 1.24e-09 | 7 |
acinar cell | 6.92e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.74e-08 | 160 |
endoderm | 3.74e-08 | 160 |
presumptive endoderm | 3.74e-08 | 160 |
larynx | 4.13e-08 | 9 |
respiratory system | 1.01e-07 | 74 |
subdivision of digestive tract | 6.15e-07 | 118 |
foregut | 8.25e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.78e-13 | 106 |
cell type cancer | 3.33e-10 | 143 |