FFCP PHASE1:Hg19::chr7:34697812..34697844,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:34697812..34697844,+
|short_description=p1@NPSR1
|description=CAGE_peak_1_at_NPSR1_5end
|association_with_transcript=-6bp_to_ENST00000381553_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=387129 | |EntrezGene=387129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23631 | |HGNC=23631 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000381553_5end | |||
|cluster_id=chr7:34697812..34697844,+ | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_1_at_NPSR1_5end | |||
|id=chr7:34697812..34697844,+ | |||
|ontology_enrichment_celltype=CL:0002178!6.98e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.10e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.10e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.77e-33;3!UBERON:0005425;9.79e-26;1 | |||
|ontology_enrichment_disease=DOID:3493!3.75e-19!2;DOID:3119!2.04e-10!14;DOID:0050619!6.33e-10!1;DOID:1357!6.33e-10!1;DOID:299!7.14e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.46e-50;2!DOID:299;1.99e-16;25!DOID:4929;1.00e-13;2!DOID:3119;4.26e-08;14!DOID:5409;1.92e-07;4!DOID:305;5.69e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.46e-50,2;DOID:299,1.95e-16,25;DOID:4929,9.40e-14,2;DOID:305,1.51e-08,106;DOID:3119,4.19e-08,14;DOID:5409,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005162!2.90e-18!2;UBERON:0000122!2.90e-18!2;UBERON:0002780!4.42e-15!41;UBERON:0001890!4.42e-15!41;UBERON:0006240!4.42e-15!41;UBERON:0003080!1.06e-14!42;UBERON:0001049!3.99e-13!57;UBERON:0005068!3.99e-13!57;UBERON:0006241!3.99e-13!57;UBERON:0007135!3.99e-13!57;UBERON:0002616!1.23e-12!59;UBERON:0003056!3.28e-12!61;UBERON:0001893!4.42e-11!34;UBERON:0000073!1.03e-10!94;UBERON:0001016!1.03e-10!94;UBERON:0000955!1.90e-10!69;UBERON:0006238!1.90e-10!69;UBERON:0004913!2.16e-10!1;UBERON:0003703!2.16e-10!1;UBERON:0001174!2.16e-10!1;UBERON:0004914!2.16e-10!1;UBERON:0000941!2.84e-10!1;UBERON:0004904!2.84e-10!1;UBERON:0002464!2.84e-10!1;UBERON:0001021!2.84e-10!1;UBERON:0001785!2.84e-10!1;UBERON:0003075!4.23e-10!86;UBERON:0007284!4.23e-10!86;UBERON:0005743!5.77e-10!86;UBERON:0001950!5.96e-10!20;UBERON:0001764!6.33e-10!1;UBERON:0001825!6.33e-10!1;UBERON:0007190!8.99e-10!1;UBERON:0002336!9.82e-10!1;UBERON:0001018!9.82e-10!1;UBERON:0002473!9.82e-10!1;UBERON:0005340!9.82e-10!1;UBERON:0002316!9.82e-10!1;UBERON:0003544!9.82e-10!1;UBERON:0001020!9.82e-10!1;UBERON:0005970!9.82e-10!1;UBERON:0002437!9.82e-10!1;UBERON:0002022!1.17e-09!1;UBERON:0002346!1.40e-09!90;UBERON:0002619!4.49e-09!22;UBERON:0001869!8.75e-09!32;UBERON:0007023!9.94e-09!115;UBERON:0001017!1.34e-08!82;UBERON:0002791!1.66e-08!33;UBERON:0000956!5.21e-08!25;UBERON:0000203!5.21e-08!25;UBERON:0000033!7.62e-08!123;UBERON:0000153!2.14e-07!129;UBERON:0007811!2.14e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.23e-26;1!UBERON:0003703;5.23e-26;1!UBERON:0001174;5.23e-26;1!UBERON:0004914;5.23e-26;1!UBERON:0000941;9.79e-26;1!UBERON:0001785;9.79e-26;1!UBERON:0002464;9.79e-26;1!UBERON:0004904;9.79e-26;1!UBERON:0001021;9.79e-26;1!UBERON:0003714;1.37e-13;2!UBERON:0005162;1.37e-13;2!UBERON:0000122;1.37e-13;2!UBERON:0002114;1.35e-09;2!UBERON:0002394;1.64e-07;4!UBERON:0003928;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.61e-26,1;UBERON:0003703,4.61e-26,1;UBERON:0001174,4.61e-26,1;UBERON:0004914,4.61e-26,1;UBERON:0000941,9.79e-26,1;UBERON:0001785,9.79e-26,1;UBERON:0002464,9.79e-26,1;UBERON:0004904,9.79e-26,1;UBERON:0001021,9.79e-26,1;UBERON:0003902,9.79e-26,1;UBERON:0005425,9.79e-26,1;UBERON:0000966,2.81e-17,6;UBERON:0005388,2.81e-17,6;UBERON:0001802,2.81e-17,6;UBERON:0003714,1.37e-13,2;UBERON:0005162,1.37e-13,2;UBERON:0000122,1.37e-13,2;UBERON:0002114,1.30e-09,2;UBERON:0001781,1.92e-07,4 | |||
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|short_description=p1@NPSR1 | |||
}} | }} |
Latest revision as of 08:42, 18 September 2015
Short description: | p1@NPSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPSR1_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | -6bp_to_ENST00000381553_5end |
EntrezGene: | NPSR1 |
HGNC: | 23631 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 4.61e-26 | 1 |
extrahepatic bile duct | 4.61e-26 | 1 |
common bile duct | 4.61e-26 | 1 |
duodenal papilla | 4.61e-26 | 1 |
cranial nerve II | 9.79e-26 | 1 |
cranial nerve | 9.79e-26 | 1 |
nerve trunk | 9.79e-26 | 1 |
nerve connecting eye with brain | 9.79e-26 | 1 |
nerve | 9.79e-26 | 1 |
retinal neural layer | 9.79e-26 | 1 |
presumptive neural retina | 9.79e-26 | 1 |
retina | 2.81e-17 | 6 |
photoreceptor array | 2.81e-17 | 6 |
posterior segment of eyeball | 2.81e-17 | 6 |
neural tissue | 1.37e-13 | 2 |
multi cell component structure | 1.37e-13 | 2 |
neuron projection bundle | 1.37e-13 | 2 |
duodenum | 1.30e-09 | 2 |
layer of retina | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.46e-50 | 2 |
adenocarcinoma | 1.95e-16 | 25 |
tubular adenocarcinoma | 9.40e-14 | 2 |
carcinoma | 1.51e-08 | 106 |
gastrointestinal system cancer | 4.19e-08 | 14 |
lung small cell carcinoma | 1.80e-07 | 4 |