FFCP PHASE1:Hg19::chr8:103801382..103801405,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:103801382..103801405,+
|short_description=p@chr8:103801382..103801405,+
|description=CAGE_peak_at_chr8:103801382..103801405,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:103801382..103801405,+ | |||
|coexpression_cluster_id=C2422 | |||
|description=CAGE_peak_at_chr8:103801382..103801405,+ | |||
|id=chr8:103801382..103801405,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.27e-23!45;CL:0002057!6.24e-22!42;CL:0000766!5.07e-19!76;CL:0000557!4.57e-16!71;CL:0002009!6.32e-15!65;CL:0000839!2.22e-14!70;CL:0000012!9.44e-14!682;CL:0002194!1.20e-13!63;CL:0000576!1.20e-13!63;CL:0000040!1.20e-13!63;CL:0000559!1.20e-13!63;CL:0000548!1.18e-12!679;CL:0000004!1.18e-12!679;CL:0000255!1.18e-12!679;CL:0000144!1.94e-12!625;CL:0000063!4.48e-12!578;CL:0000738!5.64e-12!140;CL:0002371!1.50e-11!591;CL:0000763!1.87e-11!112;CL:0000049!1.87e-11!112;CL:0000003!2.94e-10!722;CL:0002031!6.30e-08!124;CL:0000034!1.54e-07!444;CL:0000988!1.87e-07!182;CL:0002087!2.71e-07!119;CL:0000723!4.17e-07!436;CL:0000037!4.38e-07!172;CL:0000566!4.38e-07!172;CL:0000134!4.57e-07!358;CL:0000048!5.29e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.83e-16;8!CL:0002393;2.26e-14;6!CL:0002397;2.26e-14;6!CL:0000766;2.02e-13;69!CL:0000771;1.00e-11;2!CL:0000081;2.06e-11;11!CL:0000097;2.30e-10;5!CL:0000860;3.45e-10;33!CL:0002057;3.45e-10;33!CL:0000576;1.50e-09;48!CL:0000767;1.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.40e-26,72;CL:0000557,6.63e-18,67;CL:0000763,1.02e-17,108;CL:0000049,1.02e-17,108;CL:0000860,1.46e-17,42;CL:0002057,1.46e-17,42;CL:0000839,6.06e-16,66;CL:0000094,6.61e-16,8;CL:0000473,5.01e-15,48;CL:0000234,5.01e-15,48;CL:0000738,1.55e-14,136;CL:0002009,5.65e-13,61;CL:0000771,8.61e-12,2;CL:0000081,1.67e-11,11;CL:0002194,1.75e-11,59;CL:0000576,1.75e-11,59;CL:0000040,1.75e-11,59;CL:0000559,1.75e-11,59;CL:0000037,8.05e-11,168;CL:0000097,2.45e-10,5;CL:0002028,2.45e-10,5;CL:0002032,2.55e-10,161;CL:0000837,2.55e-10,161;CL:0000988,5.09e-10,177;CL:0002393,1.38e-09,9;CL:0002397,1.38e-09,9;CL:0002031,1.94e-08,120;CL:0000767,1.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.78e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.86e-13!80;UBERON:0003081!4.30e-12!216;UBERON:0001474!1.41e-11!86;UBERON:0002390!8.15e-11!102;UBERON:0003061!8.15e-11!102;UBERON:0002193!1.16e-09!112;UBERON:0004765!1.24e-09!101;UBERON:0001434!1.24e-09!101;UBERON:0002405!2.23e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-15,76;UBERON:0001474,5.52e-14,82;UBERON:0002390,1.20e-12,98;UBERON:0003061,1.20e-12,98;UBERON:0004765,2.00e-12,90;UBERON:0003081,3.87e-12,203;UBERON:0002405,6.54e-12,93;UBERON:0002193,3.98e-11,108;UBERON:0001434,7.90e-11,100 | |||
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| ||
|short_description=p@chr8:103801382..103801405,+ | |||
}} | }} |
Latest revision as of 13:41, 31 July 2015
Short description: | p@chr8:103801382..103801405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:103801382..103801405, + |
Coexpression cluster: | C2422_CD14_Mast_Eosinophils_Neutrophils_CD19_Peripheral_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.40e-26 | 72 |
granulocyte monocyte progenitor cell | 6.63e-18 | 67 |
myeloid cell | 1.02e-17 | 108 |
common myeloid progenitor | 1.02e-17 | 108 |
classical monocyte | 1.46e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-17 | 42 |
myeloid lineage restricted progenitor cell | 6.06e-16 | 66 |
granulocyte | 6.61e-16 | 8 |
defensive cell | 5.01e-15 | 48 |
phagocyte | 5.01e-15 | 48 |
leukocyte | 1.55e-14 | 136 |
macrophage dendritic cell progenitor | 5.65e-13 | 61 |
eosinophil | 8.61e-12 | 2 |
blood cell | 1.67e-11 | 11 |
monopoietic cell | 1.75e-11 | 59 |
monocyte | 1.75e-11 | 59 |
monoblast | 1.75e-11 | 59 |
promonocyte | 1.75e-11 | 59 |
hematopoietic stem cell | 8.05e-11 | 168 |
mast cell | 2.45e-10 | 5 |
basophil mast progenitor cell | 2.45e-10 | 5 |
hematopoietic oligopotent progenitor cell | 2.55e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.55e-10 | 161 |
hematopoietic cell | 5.09e-10 | 177 |
intermediate monocyte | 1.38e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.38e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 1.94e-08 | 120 |
basophil | 1.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-15 | 76 |
bone element | 5.52e-14 | 82 |
hematopoietic system | 1.20e-12 | 98 |
blood island | 1.20e-12 | 98 |
skeletal element | 2.00e-12 | 90 |
lateral plate mesoderm | 3.87e-12 | 203 |
immune system | 6.54e-12 | 93 |
hemolymphoid system | 3.98e-11 | 108 |
skeletal system | 7.90e-11 | 100 |