FFCP PHASE1:Hg19::chr10:4162906..4162948,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:4162906..4162948,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:4162906..4162948,+ | |||
|id=chr10:4162906..4162948,+ | |||
|ontology_enrichment_celltype=CL:0002009!7.05e-74!65;CL:0002057!7.60e-71!42;CL:0000766!2.60e-69!76;CL:0002194!2.21e-68!63;CL:0000576!2.21e-68!63;CL:0000040!2.21e-68!63;CL:0000559!2.21e-68!63;CL:0000557!6.49e-67!71;CL:0000860!1.37e-65!45;CL:0000839!1.02e-60!70;CL:0000738!2.24e-57!140;CL:0002087!2.36e-52!119;CL:0000763!4.74e-49!112;CL:0000049!4.74e-49!112;CL:0002031!1.66e-47!124;CL:0000037!1.09e-44!172;CL:0000566!1.09e-44!172;CL:0000988!1.24e-41!182;CL:0002032!6.37e-41!165;CL:0000837!6.37e-41!165;CL:0002393!2.32e-32!9;CL:0002397!2.32e-32!9;CL:0000134!1.08e-19!358;CL:0002320!4.29e-19!365;CL:0000219!5.61e-17!390;CL:0000034!1.46e-14!444;CL:0000048!1.92e-14!430;CL:0000840!3.28e-14!5;CL:0001029!3.28e-14!5;CL:0000723!4.40e-14!436;CL:0000767!1.12e-11!3;CL:0000875!1.60e-11!3;CL:0002396!1.60e-11!3;CL:0000842!1.09e-10!3;CL:0000990!2.23e-09!8;CL:0000224!3.97e-08!4;CL:0001014!6.53e-08!2;CL:0001016!6.53e-08!2;CL:0000063!1.07e-07!578;CL:0000451!1.29e-07!10;CL:0000094!2.34e-07!8;CL:0002371!3.39e-07!591;CL:0000144!8.32e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.09e-32;48!CL:0000860;3.15e-30;33!CL:0002057;3.15e-30;33!CL:0002393;1.04e-29;6!CL:0002397;1.04e-29;6!CL:0000766;1.13e-25;69!CL:0000473;1.29e-25;39!CL:0000234;1.29e-25;39!CL:0000767;6.65e-21;3!CL:0000763;7.74e-12;100!CL:0002087;2.15e-11;104!CL:0000875;4.72e-10;3!CL:0002396;4.72e-10;3!CL:0000094;3.54e-08;8!CL:0000738;9.29e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-62,42;CL:0002057,1.21e-62,42;CL:0000473,3.93e-60,48;CL:0000234,3.93e-60,48;CL:0000766,5.14e-55,72;CL:0002194,4.34e-52,59;CL:0000576,4.34e-52,59;CL:0000040,4.34e-52,59;CL:0000559,4.34e-52,59;CL:0002009,2.80e-50,61;CL:0000839,3.16e-46,66;CL:0000557,1.73e-45,67;CL:0002393,1.17e-37,9;CL:0002397,1.17e-37,9;CL:0000763,2.05e-35,108;CL:0000049,2.05e-35,108;CL:0000738,1.00e-29,136;CL:0002087,1.75e-27,115;CL:0002031,9.09e-24,120;CL:0000037,3.05e-23,168;CL:0002032,2.23e-22,161;CL:0000837,2.23e-22,161;CL:0000988,7.76e-22,177;CL:0000767,6.66e-21,3;CL:0000134,1.35e-10,354;CL:0002320,2.69e-10,361;CL:0000875,4.51e-10,3;CL:0002396,4.51e-10,3;CL:0000219,3.07e-09,386;CL:0000034,1.88e-08,441;CL:0000094,3.55e-08,8;CL:0000048,6.09e-08,427;CL:0000723,9.20e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.75e-46;42!CL:0000049;3.22e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.50e-61!80;UBERON:0001474!1.26e-56!86;UBERON:0002390!2.69e-54!102;UBERON:0003061!2.69e-54!102;UBERON:0002193!1.39e-48!112;UBERON:0004765!7.48e-47!101;UBERON:0001434!7.48e-47!101;UBERON:0002405!2.14e-42!115;UBERON:0002204!1.34e-24!167;UBERON:0003081!1.28e-21!216;UBERON:0002384!2.83e-18!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-39,76;UBERON:0001474,1.56e-36,82;UBERON:0004765,5.80e-33,90;UBERON:0002390,6.26e-33,98;UBERON:0003061,6.26e-33,98;UBERON:0002405,8.84e-32,93;UBERON:0002193,1.60e-29,108;UBERON:0001434,2.72e-29,100;UBERON:0002204,5.98e-16,167;UBERON:0003081,9.04e-14,203;UBERON:0002384,6.91e-10,371;UBERON:0000926,2.48e-07,315;UBERON:0004120,2.48e-07,315;UBERON:0006603,2.48e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,1.23852898652861,0,0,0,0,0,0,22.1598163412751,3.60980005446255,4.99125002646459,0,0,0,0,0,0,0,0,0.619412741790207,2.8769239232215,0.768482119587302,7.80391358632331,2.06847408441971,1.29096936716765,1.35426486594342,0,0.272906150057846,0.449446968890169,3.06083892370903,2.24650318953266,3.19668562899521,0.659702600373432,0,0,3.77272010217159,0,0,0.251248665256743,1.0429658368404,1.95469960234605,3.02699751316684,0.368277635987565,7.59509729858123,0.845021145247767,2.76385589954557,3.35453832813401,0,0,0.16072558669708,1.14005097496499,0.59675003159727,2.92262646023414,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,6.72610275577843,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0,1.19245312152671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:4162906..4162948,+ | |||
}} |
Latest revision as of 13:40, 23 July 2015
Short description: | p@chr10:4162906..4162948, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4162906..4162948, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-39 | 76 |
bone element | 1.56e-36 | 82 |
skeletal element | 5.80e-33 | 90 |
hematopoietic system | 6.26e-33 | 98 |
blood island | 6.26e-33 | 98 |
immune system | 8.84e-32 | 93 |
hemolymphoid system | 1.60e-29 | 108 |
skeletal system | 2.72e-29 | 100 |
musculoskeletal system | 5.98e-16 | 167 |
lateral plate mesoderm | 9.04e-14 | 203 |
connective tissue | 6.91e-10 | 371 |
mesoderm | 2.48e-07 | 315 |
mesoderm-derived structure | 2.48e-07 | 315 |
presumptive mesoderm | 2.48e-07 | 315 |