FFCP PHASE1:Hg19::chr10:75673460..75673478,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9052 | |||
|TSSclassifier=strong | |||
|UniProt=Q59GZ8 | |||
|association_with_transcript=113bp_to_AB208961_5end | |||
|cluster_id=chr10:75673460..75673478,+ | |||
|coexpression_cluster_id=C3047 | |||
|description=CAGE_peak_5_at_PLAU_5end | |||
|id=chr10:75673460..75673478,+ | |||
|ontology_enrichment_celltype=CL:0002321!9.83e-15!248;CL:0000220!1.27e-14!246;CL:0000066!1.57e-10!254;CL:0002076!1.65e-10!43;CL:0002368!4.56e-08!13;CL:0000548!6.28e-08!679;CL:0000004!6.28e-08!679;CL:0000255!6.28e-08!679;CL:0000144!9.51e-08!625;CL:0000012!1.26e-07!682;CL:0002202!1.84e-07!9;CL:0002632!1.84e-07!9;CL:0002371!1.99e-07!591;CL:0000223!7.33e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.49e-12;10!CL:1000494;1.49e-12;10!CL:0000244;3.82e-12;4!CL:0000731;3.82e-12;4!CL:0002166;1.43e-09;3!CL:0000239;9.34e-09;3!CL:1000615;9.34e-09;3!CL:0002306;9.34e-09;3!CL:1000449;5.11e-08;15!CL:0000235;7.31e-08;6!CL:1000497;5.92e-07;17!CL:0002518;5.92e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.17e-12,10;CL:1000494,1.17e-12,10;CL:0000244,3.20e-12,4;CL:0000731,3.20e-12,4;CL:0002166,1.10e-09,3;CL:0000239,1.51e-08,3;CL:1000615,1.51e-08,3;CL:0002306,1.51e-08,3;CL:1000449,4.39e-08,15;CL:0000235,8.80e-08,6;CL:0000066,1.13e-07,253;CL:1000497,5.19e-07,17;CL:0002518,5.19e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!4.03e-09!612;UBERON:0002050!1.76e-08!605;UBERON:0005423!1.76e-08!605;UBERON:0000467!2.89e-08!625;UBERON:0000923!3.20e-08!604;UBERON:0005291!3.20e-08!604;UBERON:0006598!3.20e-08!604;UBERON:0002532!3.20e-08!604;UBERON:0000480!3.65e-08!626;UBERON:0000468!6.56e-08!659;UBERON:0000486!1.87e-07!82;UBERON:0000161!5.33e-07!35;UBERON:0000481!6.61e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.25e-14;12!UBERON:0004211;1.49e-12;10!UBERON:0009773;1.49e-12;10!UBERON:0001231;1.49e-12;10!UBERON:0004810;1.49e-12;10!UBERON:0001708;8.30e-12;4!UBERON:0008895;8.30e-12;4!UBERON:0000365;1.04e-09;5!UBERON:0011159;1.92e-09;5!UBERON:0006554;5.34e-09;30!UBERON:0001008;5.34e-09;30!UBERON:0006853;9.34e-09;3!UBERON:0007685;9.34e-09;3!UBERON:0004134;9.34e-09;3!UBERON:0005910;4.42e-08;6!UBERON:0006555;5.11e-08;15!UBERON:0004819;5.11e-08;15!UBERON:0001285;5.11e-08;15!UBERON:0007684;5.11e-08;15!UBERON:0003729;3.52e-07;13!UBERON:0010371;7.43e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.17e-12,10;UBERON:0001708,9.90e-12,4;UBERON:0008895,9.90e-12,4;UBERON:0000365,9.07e-10,5;UBERON:0011159,2.21e-09,5;UBERON:0006554,1.44e-08,47;UBERON:0006853,1.51e-08,3;UBERON:0007685,1.51e-08,3;UBERON:0004134,1.51e-08,3;UBERON:0001008,2.54e-08,48;UBERON:0005910,3.95e-08,6;UBERON:0004211,4.39e-08,15;UBERON:0009773,4.39e-08,15;UBERON:0001231,4.39e-08,15;UBERON:0001285,4.39e-08,15;UBERON:0007684,4.39e-08,15;UBERON:0004208,4.39e-08,15;UBERON:0010188,8.19e-08,6;UBERON:0002539,8.19e-08,6;UBERON:0008816,8.19e-08,6;UBERON:0006555,1.63e-07,16;UBERON:0004819,1.63e-07,16;UBERON:0003729,3.84e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.737201809504527,0,0.218441372130172,0,0.37129905888014,0.662794751455832,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0.492484232307152,1.42800483870977,1.56727360739044,0,0.821246550437305,1.88313959392204,0,0,0,0,0,0.154816123316076,0.919421224478927,1.204823675113,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0.217188844705117,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0,0,0.661743720148475,3.99112915432615,0.87834785693126,0,0.728590576585084,0.370784442784429,0,0.174129737299267,0.797747763113191,0.238490624305342,0,0,0.198762407366705,0,0,0,0.838998872419812,0.275118041940067,0,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,1.71968044236475,0.309977343527296,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.500474079487857,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,2.70565194428616,2.72746120590835,0.286804595389004,0.365921118388786,0,0.116193942869518,0.621966330092223,0,0,0,2.57296375277154,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.88724591328378,1.31700342490351,0,1.50793458617446,1.01847289674383,0.651616610620649,0,11.5465073620219,0.115930404975077,0.234817388471643,0,0.462985512576611,0,0,0,0.492434012174795,0,1.33768046059855,2.81201501960331,3.19166043577833,2.55195175036296,0.179117045405697,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0,0,0,0,0.099972991182057,2.43247561282381,3.01354254859276,2.10833939483032,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69630663182921,0.887808626565635,0.246381468041427,5.19254429183621,0.232420756919918,0,4.0101294060657,0.184161977871793,0.68888668898764,4.00600569614778,0.917870904715969,1.80479845162965,2.00239876471478,0,2.92278449306521,1.89992932007176,0,0.340187410553031,0.647747748306418,0,0.270946437543853,0,1.01950509218015,1.66215201785745,2.0148727924996,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0.386682873168488,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0.435050081742686,0.170453254832202,0.534192213880424,0.495854746082934,0.960950336825531,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0.632758849437452,0.571890581771475,0,0,0,0,0.179872457583315,2.19629623788844,0.706874414074119,0.202182481573316,0,1.26377536871694,0,0.243713489631284,2.11300293513511,0.272999822815972,1.69686518344455,0,0,2.65375590096488,0,0.578775534266688,0,0,1.239293992399,0,0,0,0,0.354761064070598,1.05553817648832,1.64647446479951,0,0,0.288666338176536,0.670302275535787,4.3556393944529,0,1.72202149068492,5.05414427002877,4.43430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,5.06395354867265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0.664653872707185,3.64091151463049,0.627865836814451,1.19472429772959,0,0.554698692052555,0.347119476670262,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.225980740780532,1.37041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0.633602019116439,0,0.383830394638891,0,0,0,0.542999601753713,1.72844298240254,0.979762080328227,2.39460383124975,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.74627401443437,0,0,0.189403005275089,0,4.44905610798268,0,0.302461847526478,0.310874401165561,0.147855149989634,1.43367090447332,0,1.39736661188633,0,0,0.521745061811734,0,0.380805212168795,1.62748293281865,0.909243296012797,1.18151612746737,0,0.398095888698616,4.00027764663154,0,0,0,0.770479321629213,0,0.260994291965212,0,0.231522474323834,0.489473409012935,0,0,0,0,0,0.337884881306145,0,0.345430341731199,2.4308796494190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| |||
|short_description=p5@PLAU | |||
}} |
Latest revision as of 08:15, 19 September 2015
Short description: | p5@PLAU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLAU_5end |
Coexpression cluster: | C3047_Lens_papillary_normal_clear_mesenchymal_Renal_oral |
Association with transcript: | 113bp_to_AB208961_5end |
EntrezGene: | PLAU |
HGNC: | 9052 |
UniProt: | Q59GZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.17e-12 | 10 |
nephron tubule epithelial cell | 1.17e-12 | 10 |
transitional epithelial cell | 3.20e-12 | 4 |
urothelial cell | 3.20e-12 | 4 |
epithelial cell of Malassez | 1.10e-09 | 3 |
brush border epithelial cell | 1.51e-08 | 3 |
kidney cortex tubule cell | 1.51e-08 | 3 |
epithelial cell of proximal tubule | 1.51e-08 | 3 |
epithelial cell of nephron | 4.39e-08 | 15 |
macrophage | 8.80e-08 | 6 |
epithelial cell | 1.13e-07 | 253 |
kidney cell | 5.19e-07 | 17 |
kidney epithelial cell | 5.19e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.17e-12 | 10 |
jaw skeleton | 9.90e-12 | 4 |
splanchnocranium | 9.90e-12 | 4 |
urothelium | 9.07e-10 | 5 |
primary subdivision of cranial skeletal system | 2.21e-09 | 5 |
urinary system structure | 1.44e-08 | 47 |
renal cortex tubule | 1.51e-08 | 3 |
region of nephron tubule | 1.51e-08 | 3 |
proximal tubule | 1.51e-08 | 3 |
renal system | 2.54e-08 | 48 |
transitional epithelium | 3.95e-08 | 6 |
nephron epithelium | 4.39e-08 | 15 |
renal tubule | 4.39e-08 | 15 |
nephron tubule | 4.39e-08 | 15 |
nephron | 4.39e-08 | 15 |
uriniferous tubule | 4.39e-08 | 15 |
nephrogenic mesenchyme | 4.39e-08 | 15 |
protuberance | 8.19e-08 | 6 |
pharyngeal arch | 8.19e-08 | 6 |
embryonic head | 8.19e-08 | 6 |
excretory tube | 1.63e-07 | 16 |
kidney epithelium | 1.63e-07 | 16 |
mouth mucosa | 3.84e-07 | 13 |