FFCP PHASE1:Hg19::chr10:81742364..81742375,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10803 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T0M2 | |||
|association_with_transcript=0bp_to_ENST00000444384_5end | |||
|cluster_id=chr10:81742364..81742375,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_2_at_SFTPD_5end | |||
|id=chr10:81742364..81742375,- | |||
|ontology_enrichment_celltype=CL:0002057!4.57e-42!42;CL:0000860!1.86e-38!45;CL:0000766!1.69e-26!76;CL:0000557!1.28e-25!71;CL:0000839!1.68e-24!70;CL:0002009!3.74e-24!65;CL:0002194!1.43e-23!63;CL:0000576!1.43e-23!63;CL:0000040!1.43e-23!63;CL:0000559!1.43e-23!63;CL:0000763!3.64e-18!112;CL:0000049!3.64e-18!112;CL:0000738!1.55e-12!140;CL:0002031!2.54e-11!124;CL:0002087!1.59e-10!119;CL:0000037!7.43e-10!172;CL:0000566!7.43e-10!172;CL:0002032!1.42e-09!165;CL:0000837!1.42e-09!165;CL:0000988!1.22e-08!182;CL:0002393!2.31e-07!9;CL:0002397!2.31e-07!9;CL:0000875!5.61e-07!3;CL:0002396!5.61e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000875;6.63e-39;3!CL:0002396;6.63e-39;3!CL:0000576;6.96e-25;48!CL:0000860;5.76e-22;33!CL:0002057;5.76e-22;33!CL:0000766;1.68e-17;69!CL:0000473;2.69e-14;39!CL:0000234;2.69e-14;39!CL:0000763;2.11e-10;100!CL:0002087;7.43e-10;104!CL:0002393;2.07e-09;6!CL:0002397;2.07e-09;6!CL:0000738;5.98e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.89e-48,42;CL:0002057,1.89e-48,42;CL:0000473,3.17e-42,48;CL:0000234,3.17e-42,48;CL:0000875,6.65e-39,3;CL:0002396,6.65e-39,3;CL:0002393,2.83e-35,9;CL:0002397,2.83e-35,9;CL:0002194,1.68e-33,59;CL:0000576,1.68e-33,59;CL:0000040,1.68e-33,59;CL:0000559,1.68e-33,59;CL:0002009,2.25e-32,61;CL:0000766,8.43e-32,72;CL:0000839,7.51e-30,66;CL:0000557,2.17e-29,67;CL:0000763,8.85e-21,108;CL:0000049,8.85e-21,108;CL:0002087,1.34e-16,115;CL:0000738,3.40e-16,136;CL:0002031,7.59e-16,120;CL:0002032,1.97e-13,161;CL:0000837,1.97e-13,161;CL:0000037,8.36e-13,168;CL:0000988,4.55e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.93e-31;42!CL:0000049;6.18e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.16e-21!80;UBERON:0002390!1.68e-19!102;UBERON:0003061!1.68e-19!102;UBERON:0001474!4.43e-19!86;UBERON:0004765!1.13e-16!101;UBERON:0001434!1.13e-16!101;UBERON:0002193!1.29e-16!112;UBERON:0002405!5.46e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.77e-26,76;UBERON:0001474,8.22e-24,82;UBERON:0004765,1.38e-21,90;UBERON:0002405,7.56e-21,93;UBERON:0002390,1.02e-19,98;UBERON:0003061,1.02e-19,98;UBERON:0001434,2.70e-19,100;UBERON:0002193,9.15e-18,108;UBERON:0002204,5.94e-11,167;UBERON:0003081,1.02e-08,203 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,1.01778767145695,0.755751887377619,0,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,1.5369642391746,0,0.689491361473237,1.29096936716765,0,0.941211697713023,1.36453075028923,0.449446968890169,0.306083892370903,1.92557416245656,1.27867425159808,0.329851300186716,0.997318288108159,0.852449501065388,0.580418477257168,1.13477044938228,1.24564449799115,0.502497330513487,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,2.11255286311942,3.82687739937078,0.209658645508376,0.112328631146495,0.300353785683013,0,9.9754460309437,12.7306673407418,5.29726045917438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0.893288987462089,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.449947783103001,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0.0675375846183947,0,0,0.253663240775627,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0.471346769748006,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.190941474834495,0.404234377916439,0.217716747896961,0.342233301085281,0,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@SFTPD | |||
}} |
Latest revision as of 14:44, 19 September 2015
Short description: | p2@SFTPD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFTPD_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000444384_5end |
EntrezGene: | SFTPD |
HGNC: | 10803 |
UniProt: | Q5T0M2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.89e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-48 | 42 |
defensive cell | 3.17e-42 | 48 |
phagocyte | 3.17e-42 | 48 |
non-classical monocyte | 6.65e-39 | 3 |
CD14-low, CD16-positive monocyte | 6.65e-39 | 3 |
intermediate monocyte | 2.83e-35 | 9 |
CD14-positive, CD16-positive monocyte | 2.83e-35 | 9 |
monopoietic cell | 1.68e-33 | 59 |
monocyte | 1.68e-33 | 59 |
monoblast | 1.68e-33 | 59 |
promonocyte | 1.68e-33 | 59 |
macrophage dendritic cell progenitor | 2.25e-32 | 61 |
myeloid leukocyte | 8.43e-32 | 72 |
myeloid lineage restricted progenitor cell | 7.51e-30 | 66 |
granulocyte monocyte progenitor cell | 2.17e-29 | 67 |
myeloid cell | 8.85e-21 | 108 |
common myeloid progenitor | 8.85e-21 | 108 |
nongranular leukocyte | 1.34e-16 | 115 |
leukocyte | 3.40e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 7.59e-16 | 120 |
hematopoietic oligopotent progenitor cell | 1.97e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-13 | 161 |
hematopoietic stem cell | 8.36e-13 | 168 |
hematopoietic cell | 4.55e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.77e-26 | 76 |
bone element | 8.22e-24 | 82 |
skeletal element | 1.38e-21 | 90 |
immune system | 7.56e-21 | 93 |
hematopoietic system | 1.02e-19 | 98 |
blood island | 1.02e-19 | 98 |
skeletal system | 2.70e-19 | 100 |
hemolymphoid system | 9.15e-18 | 108 |
musculoskeletal system | 5.94e-11 | 167 |
lateral plate mesoderm | 1.02e-08 | 203 |