FFCP PHASE1:Hg19::chr11:47237987..47237998,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1643 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2718 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=100bp_to_uc001neg.2_5end | |||
|cluster_id=chr11:47237987..47237998,+ | |||
|description=CAGE_peak_5_at_DDB2_5end | |||
|id=chr11:47237987..47237998,+ | |||
|ontology_enrichment_celltype=CL:0000990!5.64e-12!8;CL:0002057!1.93e-11!42;CL:0000557!3.97e-11!71;CL:0002009!1.66e-10!65;CL:0000860!2.76e-10!45;CL:0000453!5.06e-10!5;CL:0000451!1.90e-09!10;CL:0000839!2.87e-09!70;CL:0002194!6.99e-09!63;CL:0000576!6.99e-09!63;CL:0000040!6.99e-09!63;CL:0000559!6.99e-09!63;CL:0000766!9.64e-09!76;CL:0000763!1.98e-07!112;CL:0000049!1.98e-07!112;CL:0000840!4.15e-07!5;CL:0001029!4.15e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;4.69e-33;5!CL:0000990;1.64e-18;8!CL:0000451;3.42e-15;10!CL:0000860;1.15e-13;33!CL:0002057;1.15e-13;33!CL:0000222;3.63e-11;1!CL:0000473;2.35e-09;39!CL:0000234;2.35e-09;39!CL:0000097;5.49e-09;5!CL:0000576;4.60e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.52e-33,5;CL:0000990,1.61e-18,8;CL:0000451,3.36e-15,10;CL:0000763,1.36e-13,108;CL:0000049,1.36e-13,108;CL:0000557,2.61e-13,67;CL:0000860,6.22e-11,42;CL:0002057,6.22e-11,42;CL:0000839,7.12e-11,66;CL:0000738,2.13e-10,136;CL:0000766,7.00e-10,72;CL:0000473,1.77e-09,48;CL:0000234,1.77e-09,48;CL:0002009,2.23e-09,61;CL:0000097,4.68e-09,5;CL:0002028,4.68e-09,5;CL:0002032,1.79e-08,161;CL:0000837,1.79e-08,161;CL:0000037,4.89e-08,168;CL:0000988,1.59e-07,177;CL:0002194,1.92e-07,59;CL:0000576,1.92e-07,59;CL:0000040,1.92e-07,59;CL:0000559,1.92e-07,59;CL:0002031,7.56e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.63e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.44e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.68e-10!80;UBERON:0001474!1.00e-08!86;UBERON:0002193!1.54e-08!112;UBERON:0004765!1.51e-07!101;UBERON:0001434!1.51e-07!101;UBERON:0002405!1.68e-07!115;UBERON:0002390!1.77e-07!102;UBERON:0003061!1.77e-07!102;UBERON:0003081!1.90e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.69e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.10e-14,76;UBERON:0002405,1.63e-13,93;UBERON:0001474,5.64e-13,82;UBERON:0002390,9.71e-13,98;UBERON:0003061,9.71e-13,98;UBERON:0004765,1.09e-11,90;UBERON:0007195,1.78e-11,1;UBERON:0002193,2.12e-11,108;UBERON:0001434,2.28e-10,100 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697287110717054,0,2.16794459626573,0.575384784644301,0.512321413058201,4.02019790810595,0.344745680736619,0.645484683583826,2.70852973188684,0,1.36453075028923,0.224723484445085,0.612167784741805,0,0,0.659702600373432,0.398927315243264,0.852449501065388,0,0,1.24564449799115,0.251248665256743,1.0429658368404,1.3031330682307,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0,0,0,0.324547393654683,0.174129737299267,0,0.476981248610684,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0,0,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0,0,0,0,0.184099797284599,0.484938170456436,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,3.94130590316755,1.49682337822484,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.606255142892519,1.66435439510497,0,0,0.61384789315225,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0.869932992075073,0.37064843820784,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0.0898683511473268,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,5.17439950568451,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60896299190448,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.385239660814607,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,2.92290463259083,3.18875616752071,3.76200406788442,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59905849479886,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p5@DDB2 | |||
}} |
Latest revision as of 04:06, 18 September 2015
Short description: | p5@DDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DDB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_uc001neg.2_5end |
EntrezGene: | DDB2 |
HGNC: | 2718 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.52e-33 | 5 |
conventional dendritic cell | 1.61e-18 | 8 |
dendritic cell | 3.36e-15 | 10 |
myeloid cell | 1.36e-13 | 108 |
common myeloid progenitor | 1.36e-13 | 108 |
granulocyte monocyte progenitor cell | 2.61e-13 | 67 |
classical monocyte | 6.22e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.22e-11 | 42 |
myeloid lineage restricted progenitor cell | 7.12e-11 | 66 |
leukocyte | 2.13e-10 | 136 |
myeloid leukocyte | 7.00e-10 | 72 |
defensive cell | 1.77e-09 | 48 |
phagocyte | 1.77e-09 | 48 |
macrophage dendritic cell progenitor | 2.23e-09 | 61 |
mast cell | 4.68e-09 | 5 |
basophil mast progenitor cell | 4.68e-09 | 5 |
hematopoietic oligopotent progenitor cell | 1.79e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-08 | 161 |
hematopoietic stem cell | 4.89e-08 | 168 |
hematopoietic cell | 1.59e-07 | 177 |
monopoietic cell | 1.92e-07 | 59 |
monocyte | 1.92e-07 | 59 |
monoblast | 1.92e-07 | 59 |
promonocyte | 1.92e-07 | 59 |
hematopoietic lineage restricted progenitor cell | 7.56e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.10e-14 | 76 |
immune system | 1.63e-13 | 93 |
bone element | 5.64e-13 | 82 |
hematopoietic system | 9.71e-13 | 98 |
blood island | 9.71e-13 | 98 |
skeletal element | 1.09e-11 | 90 |
stroma of bone marrow | 1.78e-11 | 1 |
hemolymphoid system | 2.12e-11 | 108 |
skeletal system | 2.28e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.44e-11 | 1 |