FFCP PHASE1:Hg19::chr12:13256511..13256522,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83445 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19716 | |||
|TSSclassifier=strong | |||
|UniProt=F5H0V9 | |||
|association_with_transcript=53bp_to_ENST00000545401_5end | |||
|cluster_id=chr12:13256511..13256522,- | |||
|description=CAGE_peak_5_at_GSG1_5end | |||
|id=chr12:13256511..13256522,- | |||
|ontology_enrichment_celltype=CL:0002057!1.53e-37!42;CL:0000860!5.76e-37!45;CL:0002194!2.12e-29!63;CL:0000576!2.12e-29!63;CL:0000040!2.12e-29!63;CL:0000559!2.12e-29!63;CL:0002009!3.19e-28!65;CL:0000839!1.41e-25!70;CL:0000557!4.32e-25!71;CL:0000766!7.33e-23!76;CL:0002087!2.27e-13!119;CL:0000763!9.17e-13!112;CL:0000049!9.17e-13!112;CL:0000048!1.55e-12!430;CL:0000723!4.05e-12!436;CL:0000134!7.69e-12!358;CL:0002031!1.34e-11!124;CL:0000034!1.40e-11!444;CL:0002320!2.60e-11!365;CL:0000738!4.41e-10!140;CL:0000219!1.83e-09!390;CL:0002620!6.37e-08!23;CL:0000594!2.03e-07!3;CL:0002570!3.47e-07!8;CL:0000057!6.21e-07!75;CL:0002032!9.23e-07!165;CL:0000837!9.23e-07!165;CL:0000037!9.99e-07!172;CL:0000566!9.99e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.89e-76;33!CL:0002057;2.89e-76;33!CL:0000473;9.23e-54;39!CL:0000234;9.23e-54;39!CL:0000576;4.17e-38;48!CL:0000766;3.65e-25;69!CL:0002087;9.80e-09;104!CL:0000763;6.56e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.73e-65,42;CL:0002057,4.73e-65,42;CL:0000473,1.08e-56,48;CL:0000234,1.08e-56,48;CL:0002194,5.56e-45,59;CL:0000576,5.56e-45,59;CL:0000040,5.56e-45,59;CL:0000559,5.56e-45,59;CL:0002009,1.81e-43,61;CL:0000839,4.40e-40,66;CL:0000557,1.82e-39,67;CL:0000766,1.25e-36,72;CL:0000763,7.11e-24,108;CL:0000049,7.11e-24,108;CL:0002087,2.61e-22,115;CL:0002031,2.65e-21,120;CL:0000738,1.43e-18,136;CL:0002032,2.24e-15,161;CL:0000837,2.24e-15,161;CL:0000037,1.19e-14,168;CL:0000988,8.47e-14,177;CL:0000134,9.78e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-51;42!CL:0000049;4.86e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.33e-23!80;UBERON:0001474!1.23e-20!86;UBERON:0004765!1.73e-17!101;UBERON:0001434!1.73e-17!101;UBERON:0002390!3.80e-17!102;UBERON:0003061!3.80e-17!102;UBERON:0002204!4.00e-15!167;UBERON:0002193!8.21e-15!112;UBERON:0002405!3.24e-13!115;UBERON:0002384!3.49e-11!375;UBERON:0003081!3.17e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-34,76;UBERON:0001474,5.55e-32,82;UBERON:0004765,5.38e-29,90;UBERON:0002405,5.24e-28,93;UBERON:0002390,1.72e-26,98;UBERON:0003061,1.72e-26,98;UBERON:0001434,6.31e-26,100;UBERON:0002193,7.11e-24,108;UBERON:0002204,9.48e-15,167;UBERON:0003081,9.29e-12,203;UBERON:0000926,9.06e-07,315;UBERON:0004120,9.06e-07,315;UBERON:0006603,9.06e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0.755751887377619,0.242584061187816,1.39457422143411,1.6446715520873,2.47765096716083,2.01384674625505,1.5369642391746,0.709446689665756,1.72372840368309,2.5819387343353,0,1.88242339542605,1.91034305040492,0.674170453335254,0.918251677112708,1.28371610830437,0.639337125799041,0,0.598390972864896,0.426224750532694,0.580418477257168,1.70215567407342,1.86846674698672,2.00998932205395,2.08593167368081,2.82345498116652,0.605399502633369,0,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0.816616685019573,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0.900273288253207,0,0.257640540045629,0,0.843881661206331,0,0.757301322732344,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.532685175939381,0.246381468041427,0,0.581051892299796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.429680979473094,0.290033387828457,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95460974377781,0,0.359744915166629,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48661098735387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0.993573058514948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,1.10961172300523,0,0,0,0.686520205190771,0.604923695052956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p5@GSG1 | |||
}} |
Latest revision as of 10:08, 17 September 2015
Short description: | p5@GSG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GSG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000545401_5end |
EntrezGene: | GSG1 |
HGNC: | 19716 |
UniProt: | F5H0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.73e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.73e-65 | 42 |
defensive cell | 1.08e-56 | 48 |
phagocyte | 1.08e-56 | 48 |
monopoietic cell | 5.56e-45 | 59 |
monocyte | 5.56e-45 | 59 |
monoblast | 5.56e-45 | 59 |
promonocyte | 5.56e-45 | 59 |
macrophage dendritic cell progenitor | 1.81e-43 | 61 |
myeloid lineage restricted progenitor cell | 4.40e-40 | 66 |
granulocyte monocyte progenitor cell | 1.82e-39 | 67 |
myeloid leukocyte | 1.25e-36 | 72 |
myeloid cell | 7.11e-24 | 108 |
common myeloid progenitor | 7.11e-24 | 108 |
nongranular leukocyte | 2.61e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.65e-21 | 120 |
leukocyte | 1.43e-18 | 136 |
hematopoietic oligopotent progenitor cell | 2.24e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-15 | 161 |
hematopoietic stem cell | 1.19e-14 | 168 |
hematopoietic cell | 8.47e-14 | 177 |
mesenchymal cell | 9.78e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-34 | 76 |
bone element | 5.55e-32 | 82 |
skeletal element | 5.38e-29 | 90 |
immune system | 5.24e-28 | 93 |
hematopoietic system | 1.72e-26 | 98 |
blood island | 1.72e-26 | 98 |
skeletal system | 6.31e-26 | 100 |
hemolymphoid system | 7.11e-24 | 108 |
musculoskeletal system | 9.48e-15 | 167 |
lateral plate mesoderm | 9.29e-12 | 203 |
mesoderm | 9.06e-07 | 315 |
mesoderm-derived structure | 9.06e-07 | 315 |
presumptive mesoderm | 9.06e-07 | 315 |