FFCP PHASE1:Hg19::chr12:46947214..46947235,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:46947214..46947235,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr12:46947214..46947235,+ | |||
|id=chr12:46947214..46947235,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.78e-12!42;CL:0000860!2.52e-11!45;CL:0002076!1.84e-07!43;CL:0000223!3.19e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.35e-46;33!CL:0002057;9.35e-46;33!CL:0000473;2.56e-31;39!CL:0000234;2.56e-31;39!CL:0000576;3.14e-25;48!CL:0000766;6.49e-12;69!CL:0000763;8.49e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.10e-40,42;CL:0002057,8.10e-40,42;CL:0000473,1.00e-34,48;CL:0000234,1.00e-34,48;CL:0002194,1.39e-27,59;CL:0000576,1.39e-27,59;CL:0000040,1.39e-27,59;CL:0000559,1.39e-27,59;CL:0002009,1.16e-26,61;CL:0000839,1.35e-24,66;CL:0000557,3.21e-24,67;CL:0000766,1.72e-22,72;CL:0000763,1.07e-14,108;CL:0000049,1.07e-14,108;CL:0002087,9.64e-14,115;CL:0002031,3.99e-13,120;CL:0000738,1.87e-11,136;CL:0002032,1.70e-09,161;CL:0000837,1.70e-09,161;CL:0000037,4.74e-09,168;CL:0000988,1.57e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.06e-31;42 | |||
|ontology_enrichment_disease=DOID:1749!4.01e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:4074;2.23e-08;2!DOID:4905;2.23e-08;2!DOID:3498;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.31e-08,2;DOID:4905,2.31e-08,2;DOID:3498,2.31e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.88e-21,76;UBERON:0001474,1.19e-19,82;UBERON:0004765,7.90e-18,90;UBERON:0002405,3.18e-17,93;UBERON:0002390,2.68e-16,98;UBERON:0003061,2.68e-16,98;UBERON:0001434,5.93e-16,100;UBERON:0002193,1.07e-14,108;UBERON:0002204,4.11e-09,167;UBERON:0003081,2.82e-07,203 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.78154133895312,5.37937483711111,14.8983804829809,0,0.645484683583826,0,0,0,0,0.612167784741805,0.320929027076094,0.639337125799041,3.95821560224059,7.18069167437875,4.26224750532694,0.580418477257168,0,0,2.76373531782418,7.82224377630302,8.68755378820467,1.21079900526674,0.368277635987565,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0,0,0.252433774244115,0.368199594569197,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0.721879481669586,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0.728341138602278,0,0,0,0,0,0,0,0.661983911750998,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0.693153996902029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,1.42843150884526,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:46947214..46947235,+ | |||
}} |
Latest revision as of 08:42, 24 July 2015
Short description: | p@chr12:46947214..46947235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:46947214..46947235, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.10e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.10e-40 | 42 |
defensive cell | 1.00e-34 | 48 |
phagocyte | 1.00e-34 | 48 |
monopoietic cell | 1.39e-27 | 59 |
monocyte | 1.39e-27 | 59 |
monoblast | 1.39e-27 | 59 |
promonocyte | 1.39e-27 | 59 |
macrophage dendritic cell progenitor | 1.16e-26 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-24 | 66 |
granulocyte monocyte progenitor cell | 3.21e-24 | 67 |
myeloid leukocyte | 1.72e-22 | 72 |
myeloid cell | 1.07e-14 | 108 |
common myeloid progenitor | 1.07e-14 | 108 |
nongranular leukocyte | 9.64e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.99e-13 | 120 |
leukocyte | 1.87e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.70e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-09 | 161 |
hematopoietic stem cell | 4.74e-09 | 168 |
hematopoietic cell | 1.57e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.88e-21 | 76 |
bone element | 1.19e-19 | 82 |
skeletal element | 7.90e-18 | 90 |
immune system | 3.18e-17 | 93 |
hematopoietic system | 2.68e-16 | 98 |
blood island | 2.68e-16 | 98 |
skeletal system | 5.93e-16 | 100 |
hemolymphoid system | 1.07e-14 | 108 |
musculoskeletal system | 4.11e-09 | 167 |
lateral plate mesoderm | 2.82e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.31e-08 | 2 |
pancreatic carcinoma | 2.31e-08 | 2 |
pancreatic ductal adenocarcinoma | 2.31e-08 | 2 |