FFCP PHASE1:Hg19::chr8:134582509..134582517,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:134582509..134582517,-
|short_description=p23@ST3GAL1
|description=CAGE_peak_23_at_ST3GAL1_5end
|association_with_transcript=104bp_to_ENST00000519435_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6482 | |EntrezGene=6482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10862 | |HGNC=10862 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=104bp_to_ENST00000519435_5end | |||
|cluster_id=chr8:134582509..134582517,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_23_at_ST3GAL1_5end | |||
|id=chr8:134582509..134582517,- | |||
|ontology_enrichment_celltype=CL:0000860!1.50e-15!45;CL:0002057!5.20e-15!42;CL:0000766!1.39e-13!76;CL:0002393!1.93e-12!9;CL:0002397!1.93e-12!9;CL:0000080!3.91e-12!6;CL:0000738!1.80e-11!140;CL:0002194!5.34e-11!63;CL:0000576!5.34e-11!63;CL:0000040!5.34e-11!63;CL:0000559!5.34e-11!63;CL:0000839!1.17e-10!70;CL:0002009!1.58e-10!65;CL:0000557!1.92e-10!71;CL:0002087!3.21e-10!119;CL:0000842!3.88e-10!3;CL:0000988!2.71e-09!182;CL:0000037!9.66e-09!172;CL:0000566!9.66e-09!172;CL:0000763!2.29e-08!112;CL:0000049!2.29e-08!112;CL:0000224!1.10e-07!4;CL:0002031!1.23e-07!124;CL:0002032!4.96e-07!165;CL:0000837!4.96e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.56e-82;6!CL:0002397;1.56e-82;6!CL:0000767;3.56e-27;3!CL:0000094;8.66e-23;8!CL:0000081;8.80e-17;11!CL:0000771;3.34e-11;2!CL:0000766;1.37e-10;69!CL:0000576;3.32e-09;48!CL:0000226;6.78e-08;3!CL:0000842;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.82e-55,9;CL:0002397,4.82e-55,9;CL:0000767,1.82e-27,3;CL:0000094,6.43e-23,8;CL:0000766,1.42e-21,72;CL:0000860,6.03e-17,42;CL:0002057,6.03e-17,42;CL:0000081,7.09e-17,11;CL:0000473,7.94e-15,48;CL:0000234,7.94e-15,48;CL:0000763,2.47e-14,108;CL:0000049,2.47e-14,108;CL:0000738,4.83e-14,136;CL:0002194,7.50e-12,59;CL:0000576,7.50e-12,59;CL:0000040,7.50e-12,59;CL:0000559,7.50e-12,59;CL:0002009,1.82e-11,61;CL:0000037,2.70e-11,168;CL:0000771,3.70e-11,2;CL:0000988,1.07e-10,177;CL:0000839,1.32e-10,66;CL:0000557,1.90e-10,67;CL:0002032,1.71e-09,161;CL:0000837,1.71e-09,161;CL:0002087,3.85e-08,115;CL:0000226,6.34e-08,3;CL:0000842,6.34e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.92e-13!102;UBERON:0003061!9.92e-13!102;UBERON:0002193!5.10e-11!112;UBERON:0001474!8.52e-10!86;UBERON:0002371!9.18e-09!80;UBERON:0004765!1.64e-08!101;UBERON:0001434!1.64e-08!101;UBERON:0002405!7.25e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-09,98;UBERON:0003061,1.36e-09,98;UBERON:0002371,3.27e-09,76;UBERON:0002193,1.10e-08,108;UBERON:0001474,1.55e-08,82;UBERON:0004765,8.99e-08,90;UBERON:0002405,1.61e-07,93;UBERON:0001434,5.51e-07,100 | |||
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| ||
|short_description=p23@ST3GAL1 | |||
}} | }} |
Latest revision as of 16:23, 16 September 2015
Short description: | p23@ST3GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ST3GAL1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 104bp_to_ENST00000519435_5end |
EntrezGene: | ST3GAL1 |
HGNC: | 10862 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.82e-55 | 9 |
CD14-positive, CD16-positive monocyte | 4.82e-55 | 9 |
basophil | 1.82e-27 | 3 |
granulocyte | 6.43e-23 | 8 |
myeloid leukocyte | 1.42e-21 | 72 |
classical monocyte | 6.03e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.03e-17 | 42 |
blood cell | 7.09e-17 | 11 |
defensive cell | 7.94e-15 | 48 |
phagocyte | 7.94e-15 | 48 |
myeloid cell | 2.47e-14 | 108 |
common myeloid progenitor | 2.47e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
monopoietic cell | 7.50e-12 | 59 |
monocyte | 7.50e-12 | 59 |
monoblast | 7.50e-12 | 59 |
promonocyte | 7.50e-12 | 59 |
macrophage dendritic cell progenitor | 1.82e-11 | 61 |
hematopoietic stem cell | 2.70e-11 | 168 |
eosinophil | 3.70e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
myeloid lineage restricted progenitor cell | 1.32e-10 | 66 |
granulocyte monocyte progenitor cell | 1.90e-10 | 67 |
hematopoietic oligopotent progenitor cell | 1.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-09 | 161 |
nongranular leukocyte | 3.85e-08 | 115 |
single nucleate cell | 6.34e-08 | 3 |
mononuclear cell | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-09 | 98 |
blood island | 1.36e-09 | 98 |
bone marrow | 3.27e-09 | 76 |
hemolymphoid system | 1.10e-08 | 108 |
bone element | 1.55e-08 | 82 |
skeletal element | 8.99e-08 | 90 |
immune system | 1.61e-07 | 93 |
skeletal system | 5.51e-07 | 100 |