FFCP PHASE1:Hg19::chr8:16050288..16050299,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:16050288..16050299,-
|short_description=p4@MSR1
|description=CAGE_peak_4_at_MSR1_5end
|association_with_transcript=0bp_to_ENST00000350896,NM_002445,NM_1387...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4481 | |EntrezGene=4481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7376 | |HGNC=7376 | ||
|TSSclassifier=strong | |||
|UniProt=P21757 | |UniProt=P21757 | ||
|association_with_transcript=0bp_to_ENST00000350896,NM_002445,NM_138715,NM_138716,uc003wwz.2,uc003wxa.2,uc003wxb.2,uc011kxz.1_5end | |||
|cluster_id=chr8:16050288..16050299,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_4_at_MSR1_5end | |||
|id=chr8:16050288..16050299,- | |||
|ontology_enrichment_celltype=CL:0002194!1.86e-45!63;CL:0000576!1.86e-45!63;CL:0000040!1.86e-45!63;CL:0000559!1.86e-45!63;CL:0002009!1.36e-43!65;CL:0000839!2.11e-39!70;CL:0000557!1.24e-38!71;CL:0002057!3.01e-37!42;CL:0000766!1.15e-36!76;CL:0000860!5.50e-34!45;CL:0002087!3.55e-23!119;CL:0000763!4.19e-20!112;CL:0000049!4.19e-20!112;CL:0002031!1.31e-18!124;CL:0000738!3.35e-18!140;CL:0000037!4.79e-12!172;CL:0000566!4.79e-12!172;CL:0002032!3.86e-11!165;CL:0000837!3.86e-11!165;CL:0000988!1.30e-10!182;CL:0002393!2.08e-08!9;CL:0002397!2.08e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.48e-32;39!CL:0000234;9.48e-32;39!CL:0000235;1.61e-29;6!CL:0000576;2.80e-25;48!CL:0000860;8.22e-22;33!CL:0002057;8.22e-22;33!CL:0000766;1.49e-18;69!CL:0002619;1.03e-14;3!CL:0000763;3.37e-10;100!CL:0000840;7.40e-08;5!CL:0000738;3.63e-07;136!CL:0000875;9.06e-07;3!CL:0002541;9.06e-07;3!CL:0002396;9.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.57e-63,59;CL:0000576,1.57e-63,59;CL:0000040,1.57e-63,59;CL:0000559,1.57e-63,59;CL:0002009,2.92e-61,61;CL:0000839,3.51e-56,66;CL:0000557,2.96e-55,67;CL:0000766,5.28e-51,72;CL:0000473,2.50e-50,48;CL:0000234,2.50e-50,48;CL:0000763,6.66e-32,108;CL:0000049,6.66e-32,108;CL:0000860,5.67e-31,42;CL:0002057,5.67e-31,42;CL:0002087,1.45e-29,115;CL:0000235,1.69e-29,6;CL:0002031,4.63e-28,120;CL:0000738,5.50e-24,136;CL:0002032,3.11e-19,161;CL:0000837,3.11e-19,161;CL:0000037,3.73e-18,168;CL:0000988,6.80e-17,177;CL:0002619,1.21e-14,3;CL:0002393,4.12e-08,9;CL:0002397,4.12e-08,9;CL:0000840,7.49e-08,5;CL:0001029,7.49e-08,5;CL:0000134,9.58e-08,354;CL:0002320,1.87e-07,361;CL:0000875,9.62e-07,3;CL:0002396,9.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.79e-24;42!CL:0000049;7.89e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.62e-34!102;UBERON:0003061!2.62e-34!102;UBERON:0002371!1.34e-32!80;UBERON:0002193!2.22e-32!112;UBERON:0007023!1.97e-31!115;UBERON:0001474!2.73e-29!86;UBERON:0002405!5.01e-29!115;UBERON:0004765!5.72e-24!101;UBERON:0001434!5.72e-24!101;UBERON:0000062!6.00e-12!511;UBERON:0003081!7.27e-12!216;UBERON:0002204!5.21e-11!167;UBERON:0000467!2.01e-09!625;UBERON:0000480!2.33e-09!626;UBERON:0000922!3.98e-09!612;UBERON:0002050!4.54e-09!605;UBERON:0005423!4.54e-09!605;UBERON:0000468!6.53e-09!659;UBERON:0000923!1.20e-08!604;UBERON:0005291!1.20e-08!604;UBERON:0006598!1.20e-08!604;UBERON:0002532!1.20e-08!604;UBERON:0002298!1.42e-08!8;UBERON:0001049!3.39e-08!57;UBERON:0005068!3.39e-08!57;UBERON:0006241!3.39e-08!57;UBERON:0007135!3.39e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.06e-07;3!UBERON:0000920;9.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.33e-48,76;UBERON:0001474,4.89e-44,82;UBERON:0002405,7.08e-41,93;UBERON:0004765,1.45e-39,90;UBERON:0002390,1.85e-38,98;UBERON:0003061,1.85e-38,98;UBERON:0001434,5.69e-35,100;UBERON:0002193,2.73e-34,108;UBERON:0002204,2.65e-18,167;UBERON:0003081,4.49e-15,203;UBERON:0002384,8.39e-08,371;UBERON:0000926,2.56e-07,315;UBERON:0004120,2.56e-07,315;UBERON:0006603,2.56e-07,315 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,2.23915474239924,4.53451132426571,2.06060454107349,0.872389432677388,1.13362783106643,0.242584061187816,0,0,0.619412741790207,2.01384674625505,6.40401766322752,3.78371567821736,0.344745680736619,0.645484683583826,0,0.752969358170419,0.545812300115692,1.12361742222542,0.306083892370903,2.24650318953266,0.639337125799041,1.9791078011203,7.77908264724364,2.55734850319616,0,0,0.622822248995575,2.76373531782418,8.86520961314342,5.42972111762792,1.21079900526674,1.10483290796269,0.316462387440884,2.74631872205524,0.637812899895131,1.25795187305026,0.112328631146495,0,0.48217676009124,1.42506371870624,0.79566670879636,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,8.43823223502177,8.70648686496336,4.78648657867915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0797652739329,11.7002132569619,7.58018927672514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,24.6105974801742,25.3000727379638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.96255619048879,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,0.384751292518985,0,0,0,0,0,1.00757352742049,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0.472834243795189,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,2.05173127149315,0,0,0.79339561045614,0,0,3.84434685243701,0.157204305099666,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0.573409195690071,0.776503360757966,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0.620916591138472,0,0,0.203909198930495,0,0,0,0.235479278551542,0.157115589916002,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0.218559560503957,0,0.245148321753905,0,0.785233868459781,2.37637120261669,0,0,1.2217909337381,0.193373663920732,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,1.13776295448085,0.213233981900981,0,0.193766729508018,0.558672428662721,0,0.0636471582781649,0,0,0,0.26940821205835,0.502055437748735,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p4@MSR1 | |||
}} | }} |
Latest revision as of 03:24, 17 September 2015
Short description: | p4@MSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MSR1_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 0bp_to_ENST00000350896, NM_002445, NM_138715, NM_138716, uc003wwz.2, uc003wxa.2, uc003wxb.2, uc011kxz.1_5end |
EntrezGene: | MSR1 |
HGNC: | 7376 |
UniProt: | P21757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.33e-48 | 76 |
bone element | 4.89e-44 | 82 |
immune system | 7.08e-41 | 93 |
skeletal element | 1.45e-39 | 90 |
hematopoietic system | 1.85e-38 | 98 |
blood island | 1.85e-38 | 98 |
skeletal system | 5.69e-35 | 100 |
hemolymphoid system | 2.73e-34 | 108 |
musculoskeletal system | 2.65e-18 | 167 |
lateral plate mesoderm | 4.49e-15 | 203 |
connective tissue | 8.39e-08 | 371 |
mesoderm | 2.56e-07 | 315 |
mesoderm-derived structure | 2.56e-07 | 315 |
presumptive mesoderm | 2.56e-07 | 315 |