FFCP PHASE1:Hg19::chr14:58832207..58832210,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9885 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000466065_5end | |||
|cluster_id=chr14:58832207..58832210,+ | |||
|coexpression_cluster_id=C1592 | |||
|description=CAGE_peak_6_at_ARID4A_5end | |||
|id=chr14:58832207..58832210,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.45e-24!140;CL:0000037!5.07e-24!172;CL:0000566!5.07e-24!172;CL:0000988!1.10e-21!182;CL:0002032!3.53e-21!165;CL:0000837!3.53e-21!165;CL:0002031!2.39e-19!124;CL:0002087!7.39e-18!119;CL:0000542!4.62e-11!53;CL:0000051!4.62e-11!53;CL:0000838!6.31e-11!52;CL:0000763!1.01e-10!112;CL:0000049!1.01e-10!112;CL:0000766!1.01e-09!76;CL:0000791!1.46e-09!18;CL:0000789!1.46e-09!18;CL:0002420!1.46e-09!18;CL:0002419!1.46e-09!18;CL:0000790!1.46e-09!18;CL:0000557!2.04e-09!71;CL:0000839!1.27e-08!70;CL:0000084!4.18e-08!25;CL:0000827!4.18e-08!25;CL:0002009!3.66e-07!65;CL:0002393!4.51e-07!9;CL:0002397!4.51e-07!9;CL:0000625!8.55e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.09e-12;6!CL:0002397;1.09e-12;6!CL:0000791;4.81e-10;18!CL:0000789;4.81e-10;18!CL:0002419;4.81e-10;18!CL:0000623;2.00e-07;3!CL:0000766;6.56e-07;69!CL:0000875;8.68e-07;3!CL:0002396;8.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.18e-25,136;CL:0000037,3.63e-22,168;CL:0000988,2.79e-20,177;CL:0002031,4.18e-19,120;CL:0002032,4.18e-19,161;CL:0000837,4.18e-19,161;CL:0002087,2.46e-18,115;CL:0002393,1.69e-17,9;CL:0002397,1.69e-17,9;CL:0000766,2.99e-14,72;CL:0000557,7.77e-12,67;CL:0000839,7.34e-11,66;CL:0000791,1.39e-10,18;CL:0000789,1.39e-10,18;CL:0002420,1.39e-10,18;CL:0002419,1.39e-10,18;CL:0000790,1.39e-10,18;CL:0000763,1.63e-10,108;CL:0000049,1.63e-10,108;CL:0000838,2.74e-09,52;CL:0000542,5.04e-09,53;CL:0000051,5.04e-09,53;CL:0000473,5.08e-09,48;CL:0000234,5.08e-09,48;CL:0002194,2.57e-08,59;CL:0000576,2.57e-08,59;CL:0000040,2.57e-08,59;CL:0000559,2.57e-08,59;CL:0002009,6.84e-08,61;CL:0000623,1.02e-07,3;CL:0000825,1.02e-07,3;CL:0000860,2.60e-07,42;CL:0002057,2.60e-07,42;CL:0000084,5.68e-07,25;CL:0000827,5.68e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;4.81e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.56e-10!102;UBERON:0003061!5.56e-10!102;UBERON:0002193!7.26e-09!112;UBERON:0007023!8.06e-08!115;UBERON:0002371!2.81e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.59e-11,98;UBERON:0003061,3.59e-11,98;UBERON:0002371,1.26e-10,76;UBERON:0002193,3.43e-10,108;UBERON:0001474,2.22e-09,82;UBERON:0002405,2.90e-08,93;UBERON:0004765,5.38e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.684372125364421,0,0.534893840235659,0.410502947249729,0.236132343941038,0,1.53531759238885,0.464448369948228,0,0,0,0.0774672005803016,0.853015394924529,0.293600439334847,6.64794490238253,5.01361118675354,2.82114131930607,0.895661896959697,0.647787332037959,0.257575567634187,1.30858414901608,0.755751887377619,1.21292030593908,0.232429036905685,0,0.929119112685311,0,0.256160706529101,0.236482229888585,0.689491361473237,0,0,1.31769637679823,0.818718450173537,1.34834090667051,0,0,0,0.659702600373432,0.997318288108159,0,0.290209238628584,0,0,0.251248665256743,0,0.65156653411535,0.605399502633369,0.368277635987565,0,1.26753171787165,1.70083439972035,1.04829322754188,0.898629049171961,1.65194582125657,1.76798145366788,1.14005097496499,1.19350006319454,2.37463399894024,0,0,0,0.853460445133014,2.40237592221607,0.574752439954483,1.32208974556972,0.954053754535364,5.12291672198504,2.34894875748376,2.29363936875137,1.32171328579026,0.560508562981536,0.263384084775077,6.68813218387032,4.32311839024081,2.87842098599313,0.334372990781356,0.977766799900771,1.4203434172042,0,0.891283655081389,1.76763544484902,1.32920336750173,1.62482318259009,1.5370958367081,0.780356085359269,1.31550323682941,2.21080014228679,0.869409257205157,1.92772532110679,1.33770414044857,2.09071047609954,0.906474741580529,0.383220493601921,1.37450978193052,1.77113784413652,0.95569624297229,1.95325036156926,0.950452044448374,0.602300476311091,0.511946444617674,1.24930726552346,0.473554504088034,1.64225599384209,3.22570789159572,1.87208137048455,3.62061009706997,0,0,0,0.361439152384566,0,0,0,0,0.378139268656271,0,0.087834785693126,0.0654895377488563,0,0,1.62273696827342,0.870648686496336,0.26591592103773,2.14641561874808,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,1.03366703667732,0.71153252537342,0,0,0.760272105718513,0.24406205754817,0,0,0.357198913136319,0,0,0,0,0,3.9534125230819,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0.280901613404497,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.538168907066586,0.640672166455702,0.423863802319124,0.300091096084402,0.206105058476878,1.03056216018252,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0.710019185033229,0,0,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,2.6487785964879,0.614942192715568,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,1.23108503043699,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0.290633938513962,0,1.47798971368783,1.14462964217194,0.621984346622316,2.73827911492227,1.13618190083742,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0,0,1.50719688529793,0,0.099972991182057,0,1.00451418286425,2.10833939483032,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,3.34952292343276,1.94064817373566,3.33691894327346,0,0,0,0,0,1.49801404789436,11.966458368161,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,3.10152039184331,3.45142721309787,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.348631135379878,0.120859449591622,0,0.276242966807689,0,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0,0,0,1.33953315142039,0,0.082509499920588,0,0,0,0,0,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.638063562472921,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0.764637207142375,1.13929437434833,0.714695326373367,0.411362273086194,1.29694662238543,2.16012574895246,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.355709216742071,0.318852545457645,0.399158742865633,0.383010740264733,1.2700414963433,0.324621940274555,0.561594356226918,0.456469358066384,0,2.50634477090067,0.846458889008016,0.963528450622197,2.01799707191048,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0.242721043499027,0.557216921387392,0,0.47748896947538,0,0,0.994147647766298,0.422008249231538,0.111308705022906,0.16480387422676,0.844501632511974,0.19924798825107,1.10513566212459,0.251932747854276,0.511343412510774,0.615424027305347,0.311039587661807,0.359473404589307,0.179021174675609,0.511572370226872,0.690503839458535,0,1.11136990144637,0,0.463840490809256,0,0.520855522170466,1.13697999995054,0.724999575434793,0.1137934482855,0.254253650292766,0,1.03423011972439,0.874813840149763,0,0,0.723578631752448,1.525817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| |||
|short_description=p6@ARID4A | |||
}} |
Latest revision as of 18:54, 24 September 2015
Short description: | p6@ARID4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARID4A_5end |
Coexpression cluster: | C1592_Neutrophils_Natural_CD19_CD4_CD8_Peripheral_CD14 |
Association with transcript: | 14bp_to_ENST00000466065_5end |
EntrezGene: | ARID4A |
HGNC: | 9885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.59e-11 | 98 |
blood island | 3.59e-11 | 98 |
bone marrow | 1.26e-10 | 76 |
hemolymphoid system | 3.43e-10 | 108 |
bone element | 2.22e-09 | 82 |
immune system | 2.90e-08 | 93 |
skeletal element | 5.38e-08 | 90 |