FFCP PHASE1:Hg19::chr8:22422692..22422735,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:22422692..22422735,+
|short_description=p12@SORBS3
|description=CAGE_peak_12_at_SORBS3_5end
|association_with_transcript=-43bp_to_ENST00000519453_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10174 | |EntrezGene=10174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |HGNC=30907 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000519453_5end | |||
|cluster_id=chr8:22422692..22422735,+ | |||
|description=CAGE_peak_12_at_SORBS3_5end | |||
|id=chr8:22422692..22422735,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.86e-24!254;CL:0000220!1.31e-16!246;CL:0002321!2.25e-16!248;CL:0000222!1.09e-09!119;CL:0000076!6.99e-09!62;CL:0002076!1.51e-08!43;CL:0000223!3.26e-08!59;CL:0000077!3.96e-07!19;CL:0002368!8.14e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.98e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.78e-20,253;CL:0002321,1.05e-12,250;CL:0000077,5.81e-09,19;CL:0000222,6.69e-08,121;CL:0000076,1.47e-07,63;CL:0000223,2.65e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!2.52e-16!238;UBERON:0009142!2.52e-16!238;UBERON:0000481!3.01e-16!347;UBERON:0004119!2.60e-13!169;UBERON:0000925!2.60e-13!169;UBERON:0006595!2.60e-13!169;UBERON:0002100!7.79e-13!216;UBERON:0000475!2.09e-12!365;UBERON:0000468!2.52e-11!659;UBERON:0001007!3.18e-11!155;UBERON:0001555!3.18e-11!155;UBERON:0007026!3.18e-11!155;UBERON:0009569!3.92e-11!113;UBERON:0000467!2.19e-10!625;UBERON:0000480!3.50e-10!626;UBERON:0003914!5.48e-10!118;UBERON:0004921!1.04e-09!129;UBERON:0004185!1.04e-09!129;UBERON:0000477!1.97e-09!286;UBERON:0001048!2.97e-09!168;UBERON:0005256!8.98e-09!143;UBERON:0000077!9.04e-09!130;UBERON:0000483!1.16e-08!309;UBERON:0001004!1.30e-08!72;UBERON:0000119!2.20e-08!312;UBERON:0005177!6.38e-08!107;UBERON:0001041!7.01e-08!98;UBERON:0000466!7.28e-08!126;UBERON:0000065!1.63e-07!53;UBERON:0008947!1.91e-07!38;UBERON:0003258!1.91e-07!38;UBERON:0002050!2.43e-07!605;UBERON:0005423!2.43e-07!605;UBERON:0000923!3.09e-07!604;UBERON:0005291!3.09e-07!604;UBERON:0006598!3.09e-07!604;UBERON:0002532!3.09e-07!604;UBERON:0000922!3.31e-07!612;UBERON:0004111!3.46e-07!241;UBERON:0000062!4.31e-07!511;UBERON:0000464!5.45e-07!104 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,5.85e-10,112;UBERON:0004119,6.04e-09,160;UBERON:0000925,6.04e-09,160;UBERON:0006595,6.04e-09,160;UBERON:0002100,7.17e-09,199;UBERON:0004921,3.22e-08,118;UBERON:0001041,5.03e-08,87;UBERON:0005177,5.41e-08,101;UBERON:0001007,1.68e-07,145;UBERON:0001555,1.68e-07,145;UBERON:0007026,1.68e-07,145;UBERON:0001048,3.63e-07,160;UBERON:0005172,4.67e-07,54;UBERON:0005173,4.67e-07,54;UBERON:0003914,4.72e-07,117;UBERON:0008947,5.70e-07,38;UBERON:0003258,5.70e-07,38;UBERON:0003513,8.04e-07,7;UBERON:0000065,9.76e-07,54 | |||
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|phase1_expression=0.908391896352783,1.07050261945492,0.704772020479856,2.00146596706261,0.446961094427288,0.872338524100369,2.53299878168311,0,0.261185628199839,2.94880723801811,6.97801167972428,1.09220686065086,1.05506791291381,1.36142988256051,0.994192127183747,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,1.84681587115182,1.42800483870977,1.25381888591235,0.85870796139317,1.09499540058307,0.502170558379211,0,0,0,0,0,0,0.919421224478927,4.51808878167375,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.53435074212236,1.80719576192283,1.00267582127178,1.88300474649071,0.795285947051099,2.43317435151318,0.945348171640679,0.443458794925128,0.43917392846563,1.30979075497713,2.5500670180478,1.48313777113772,0.324547393654683,0,0,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,0,1.67799774483962,0.825354125820202,1.25396979922086,0,0,0.66944122552934,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.267899184852239,0.22452937262617,0.450445921933289,0,0.949265659568129,0.366403487860815,0,0,1.3082821564276,1.49091585508596,1.01304409331664,0.926864265692532,2.0078563452417,1.06400514659507,0.560677600142307,1.06748995729705,1.97334038733728,0.622422070799533,0.942974704487816,0.817309515567294,0.756787138224657,0,0.937285727335186,0.624320153660641,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.491337269247072,0.413303124703062,0,0.494533858557114,1.82032272387605,0.718618141816238,0.336672227908132,0.625592599359821,1.38532057742091,0.438977620880838,0.30648779579902,0.300476117813194,0.567160915800105,0.358779271377724,0.427114777637135,0,0.900273288253207,0.721367704669072,1.03056216018252,0.930584281657949,0.675105328965065,1.16924406193438,1.51460264546469,0.460249493211497,0.484938170456436,1.42003837006646,0.906768884048762,0.847802961552438,1.35282597214308,3.00020732649918,2.00763216772303,0.121973706129595,0.132529768321485,0.116193942869518,0.414644220061482,0.756962552626885,0,0,1.28648187638577,1.38134921352481,1.39310378409594,0,3.66751080123516,3.54027849164014,1.68707720918437,2.75734931830985,3.92182999366331,3.32178866755535,2.15730093056263,1.56977172100277,0.38474715694639,1.4763109092493,5.60967095213783,2.057870056657,0,16.478154526838,6.87979051674338,8.27105869353966,0,0.737930631258681,1.20097467208968,4.06076056011915,3.37205259772859,0.904760751704678,0.648119116109707,0.325808305310325,3.11980435583874,1.44331342025273,0,0.352226082707465,0.721832238805369,1.85194205030644,0.951270761172991,2.37061319387782,0,0,0,0,1.87467667973554,3.02367830757947,2.1266264586358,2.14940454486836,3.19697332365358,2.30029607499127,0,0,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0.129271715757778,0,0,0,2.08014873822732,1.54324424557285,1.41849132023278,1.8649552531127,0.57191197463259,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0.904318131178758,0,1.29964888536674,0,0,0,0.479249710983165,0,0,0.723906533337896,1.64381058040307,0.716243852959582,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.613457458595699,3.50119364741774,0.813795071099207,1.45579603071565,0.713715955188647,0.946214490203608,0.585707074963566,1.20378439891088,0,1.03473071292505,1.99267679560631,0.737476674166813,0.260650843404249,0.391602314925481,1.02943027143257,0,0,0.106727557803444,0.303127571446259,4.99306318531491,0.30239029332968,0.496215615637554,0.767309866440312,0.280660094433074,0.256278298511402,1.02341449813341,0.482561763430822,0,0.771048469013278,1.24293207719189,0.574890092096664,0,0.929683027679674,0.241718899183244,2.6065841139427,3.40699659062816,1.26295892981067,1.0925470080403,0.393373244878272,1.35359883872224,0.693138033939733,7.0591479225917,2.92278449306521,0.949964660035881,0,0,1.29549549661284,1.54227252690289,3.25135725052623,5.01689773854853,3.56826782263054,3.3243040357149,1.56712328305525,0,0,0.512900250232778,0,1.30151357865721,4.01859945426117,0.0915694648183434,0,9.76251414593493,5.20048196829217,1.6068392984416,0.580024309752732,0.462145851343933,0.307007349452259,0,0.429680979473094,1.0151168573996,0.170453254832202,0,2.64455864577565,2.49847087574638,0.765676274967505,4.4509423576442,1.85938219718914,2.20368642781448,1.3940745403212,1.23213432070436,0.532306030317022,0,1.29726953372744,0.429374660225974,0,0,0.762520775695299,1.535386747868,0,1.27281299170375,2.35484592059769,0.359744915166629,0.54907405947211,0.235624804691373,3.23491970517306,0,1.68503382495592,0.975267478179181,1.94970791705028,4.22600587027022,0.409499734223957,0.707027159768564,0,3.30819206127675,2.65375590096488,2.19225442626881,3.47265320560013,0,1.01455188481352,1.8589409885985,0.281695602532241,0.430234056612155,0.392996164052485,1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| ||
|short_description=p12@SORBS3 | |||
}} | }} |
Latest revision as of 11:33, 17 September 2015
Short description: | p12@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SORBS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000519453_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.78e-20 | 253 |
embryonic cell | 1.05e-12 | 250 |
mesothelial cell | 5.81e-09 | 19 |
mesodermal cell | 6.69e-08 | 121 |
squamous epithelial cell | 1.47e-07 | 63 |
endodermal cell | 2.65e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 5.85e-10 | 112 |
endoderm-derived structure | 6.04e-09 | 160 |
endoderm | 6.04e-09 | 160 |
presumptive endoderm | 6.04e-09 | 160 |
trunk | 7.17e-09 | 199 |
subdivision of digestive tract | 3.22e-08 | 118 |
foregut | 5.03e-08 | 87 |
trunk region element | 5.41e-08 | 101 |
digestive system | 1.68e-07 | 145 |
digestive tract | 1.68e-07 | 145 |
primitive gut | 1.68e-07 | 145 |
primordium | 3.63e-07 | 160 |
abdomen element | 4.67e-07 | 54 |
abdominal segment element | 4.67e-07 | 54 |
epithelial tube | 4.72e-07 | 117 |
respiratory primordium | 5.70e-07 | 38 |
endoderm of foregut | 5.70e-07 | 38 |
trunk blood vessel | 8.04e-07 | 7 |
respiratory tract | 9.76e-07 | 54 |