FFCP PHASE1:Hg19::chr16:10912729..10912750,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=780776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20398 | |||
|TSSclassifier=strong | |||
|UniProt=A6NH52 | |||
|association_with_transcript=-108bp_to_ENST00000299866,NM_001079512,uc002dad.3,uc002daf.1,uc010bun.2,uc010buo.1,uc010uyr.1,uc010uys.1,uc010uyt.1,uc010uyu.1_5end | |||
|cluster_id=chr16:10912729..10912750,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_FAM18A_5end | |||
|id=chr16:10912729..10912750,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-16;82!UBERON:0006215;6.80e-13;3!UBERON:0010122;9.38e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.76e-90!57;UBERON:0005068!9.76e-90!57;UBERON:0006241!9.76e-90!57;UBERON:0007135!9.76e-90!57;UBERON:0002616!8.34e-76!59;UBERON:0001017!4.03e-73!82;UBERON:0005743!1.19e-71!86;UBERON:0003075!1.28e-71!86;UBERON:0007284!1.28e-71!86;UBERON:0007023!2.97e-68!115;UBERON:0003080!3.93e-68!42;UBERON:0000955!1.04e-67!69;UBERON:0006238!1.04e-67!69;UBERON:0002346!1.10e-67!90;UBERON:0002780!2.33e-66!41;UBERON:0001890!2.33e-66!41;UBERON:0006240!2.33e-66!41;UBERON:0000073!1.24e-65!94;UBERON:0001016!1.24e-65!94;UBERON:0002020!4.67e-62!34;UBERON:0003528!4.67e-62!34;UBERON:0001893!2.57e-61!34;UBERON:0002791!2.92e-59!33;UBERON:0001869!2.31e-58!32;UBERON:0003056!1.26e-50!61;UBERON:0000956!1.63e-44!25;UBERON:0000203!1.63e-44!25;UBERON:0002619!2.59e-43!22;UBERON:0000153!2.76e-43!129;UBERON:0007811!2.76e-43!129;UBERON:0000033!3.17e-41!123;UBERON:0001950!3.64e-39!20;UBERON:0004121!4.24e-37!169;UBERON:0000924!7.88e-36!173;UBERON:0006601!7.88e-36!173;UBERON:0000025!2.66e-23!194;UBERON:0003076!1.59e-21!15;UBERON:0003057!1.59e-21!15;UBERON:0004111!7.09e-19!241;UBERON:0002420!9.92e-19!9;UBERON:0007245!9.92e-19!9;UBERON:0010009!9.92e-19!9;UBERON:0010011!9.92e-19!9;UBERON:0000454!9.92e-19!9;UBERON:0002308!1.20e-18!9;UBERON:0000125!1.20e-18!9;UBERON:0000477!6.70e-17!286;UBERON:0004733!1.95e-16!12;UBERON:0002028!1.95e-16!12;UBERON:0007277!1.95e-16!12;UBERON:0002298!4.23e-16!8;UBERON:0000483!1.29e-15!309;UBERON:0000119!2.72e-15!312;UBERON:0004732!5.56e-15!13;UBERON:0009663!1.20e-14!7;UBERON:0000200!3.28e-14!6;UBERON:0001871!8.75e-14!7;UBERON:0000064!2.02e-13!219;UBERON:0000475!2.37e-12!365;UBERON:0000349!8.67e-12!5;UBERON:0002021!1.12e-11!5;UBERON:0002680!2.64e-11!9;UBERON:0001895!2.64e-11!9;UBERON:0010092!2.64e-11!9;UBERON:0001872!4.73e-11!5;UBERON:0000369!1.10e-09!4;UBERON:0002435!1.10e-09!4;UBERON:0000204!1.10e-09!4;UBERON:0010082!1.10e-09!4;UBERON:0000481!2.34e-09!347;UBERON:0000062!5.48e-09!511;UBERON:0000922!3.62e-08!612;UBERON:0000923!4.67e-08!604;UBERON:0005291!4.67e-08!604;UBERON:0006598!4.67e-08!604;UBERON:0002532!4.67e-08!604;UBERON:0002771!4.88e-08!3;UBERON:0002050!5.24e-08!605;UBERON:0005423!5.24e-08!605;UBERON:0005383!9.46e-08!3;UBERON:0005382!9.46e-08!3;UBERON:0000988!1.28e-07!3;UBERON:0000467!1.80e-07!625;UBERON:0000480!2.01e-07!626;UBERON:0006331!3.55e-07!3;UBERON:0001894!3.77e-07!7;UBERON:0006222!3.77e-07!7;UBERON:0001896!5.60e-07!3;UBERON:0005290!5.60e-07!3;UBERON:0010096!5.60e-07!3;UBERON:0000468!6.10e-07!659;UBERON:0002240!7.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.71e-80;32!UBERON:0002619;3.23e-78;22!UBERON:0003528;5.84e-78;34!UBERON:0002020;5.84e-78;34!UBERON:0002791;9.47e-75;32!UBERON:0001893;1.40e-71;34!UBERON:0001950;4.46e-70;20!UBERON:0000956;1.38e-68;25!UBERON:0000203;1.38e-68;25!UBERON:0002780;2.81e-53;41!UBERON:0001890;2.81e-53;41!UBERON:0000073;2.94e-52;53!UBERON:0002616;2.94e-52;53!UBERON:0000955;3.87e-38;68!UBERON:0001017;1.38e-37;75!UBERON:0001016;4.88e-27;83!UBERON:0000200;1.26e-26;6!UBERON:0004733;3.23e-26;12!UBERON:0002028;3.23e-26;12!UBERON:0002298;2.54e-24;6!UBERON:0004732;4.43e-24;13!UBERON:0002420;1.18e-22;9!UBERON:0007245;1.18e-22;9!UBERON:0010009;1.18e-22;9!UBERON:0010011;1.18e-22;9!UBERON:0000454;1.18e-22;9!UBERON:0000125;1.66e-22;9!UBERON:0002308;1.66e-22;9!UBERON:0001871;5.09e-22;6!UBERON:0002021;1.08e-21;5!UBERON:0000349;1.08e-21;5!UBERON:0000369;8.78e-18;4!UBERON:0002435;8.78e-18;4!UBERON:0000204;8.78e-18;4!UBERON:0002680;3.17e-16;9!UBERON:0001895;3.17e-16;9!UBERON:0009663;3.30e-15;7!UBERON:0007023;1.63e-14;114!UBERON:0001870;3.28e-14;3!UBERON:0005383;7.19e-14;3!UBERON:0005382;7.19e-14;3!UBERON:0001872;1.05e-13;5!UBERON:0000988;1.73e-13;3!UBERON:0001896;1.34e-12;3!UBERON:0005290;1.34e-12;3!UBERON:0011216;3.16e-11;132!UBERON:0002702;2.73e-10;2!UBERON:0002771;2.92e-10;2!UBERON:0001876;9.38e-10;2!UBERON:0001873;9.38e-10;2!UBERON:0001954;9.38e-10;2!UBERON:0003022;9.38e-10;2!UBERON:0002421;9.38e-10;2!UBERON:0002600;9.38e-10;2!UBERON:0002148;1.48e-09;2!UBERON:0006331;1.48e-09;2!UBERON:0009662;1.48e-09;2!UBERON:0010314;1.08e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.18e-100,53;UBERON:0002616,3.18e-100,53;UBERON:0001049,7.23e-100,56;UBERON:0005068,7.23e-100,56;UBERON:0006241,7.23e-100,56;UBERON:0007135,7.23e-100,56;UBERON:0003528,1.08e-90,34;UBERON:0002020,1.08e-90,34;UBERON:0001869,1.70e-89,32;UBERON:0001017,6.66e-86,81;UBERON:0000955,1.50e-84,68;UBERON:0006238,1.50e-84,68;UBERON:0001893,5.26e-84,34;UBERON:0002791,9.63e-83,32;UBERON:0002619,1.89e-78,22;UBERON:0001016,1.19e-76,89;UBERON:0002780,4.54e-74,41;UBERON:0001890,4.54e-74,41;UBERON:0003080,4.54e-74,41;UBERON:0006240,4.54e-74,41;UBERON:0001950,3.44e-70,20;UBERON:0000956,8.58e-69,25;UBERON:0000203,8.58e-69,25;UBERON:0003075,5.46e-66,82;UBERON:0007284,5.46e-66,82;UBERON:0002346,1.42e-62,86;UBERON:0010371,2.04e-50,104;UBERON:0007023,1.34e-48,114;UBERON:0003056,5.61e-48,61;UBERON:0010314,5.77e-43,132;UBERON:0004121,2.19e-36,171;UBERON:0000924,2.19e-36,171;UBERON:0006601,2.19e-36,171;UBERON:0011216,1.83e-27,223;UBERON:0000200,1.00e-26,6;UBERON:0004733,3.67e-26,12;UBERON:0002028,3.67e-26,12;UBERON:0007277,3.67e-26,12;UBERON:0003076,2.02e-25,15;UBERON:0003057,2.02e-25,15;UBERON:0000025,3.36e-25,192;UBERON:0002298,3.56e-24,6;UBERON:0004732,4.98e-24,13;UBERON:0002420,8.68e-23,9;UBERON:0007245,8.68e-23,9;UBERON:0010009,8.68e-23,9;UBERON:0010011,8.68e-23,9;UBERON:0000454,8.68e-23,9;UBERON:0000125,1.17e-22,9;UBERON:0002308,1.17e-22,9;UBERON:0001871,2.95e-22,6;UBERON:0000349,6.77e-22,5;UBERON:0002021,1.13e-21,5;UBERON:0004111,1.77e-18,240;UBERON:0000369,1.05e-17,4;UBERON:0002435,1.05e-17,4;UBERON:0000204,1.05e-17,4;UBERON:0010082,1.05e-17,4;UBERON:0002680,2.39e-16,9;UBERON:0001895,2.39e-16,9;UBERON:0010092,2.39e-16,9;UBERON:0009663,3.16e-15,7;UBERON:0001870,4.67e-14,3;UBERON:0005383,7.21e-14,3;UBERON:0005382,7.21e-14,3;UBERON:0001872,8.02e-14,5;UBERON:0000988,1.32e-13,3;UBERON:0000483,1.14e-12,306;UBERON:0000119,1.83e-12,309;UBERON:0001896,2.43e-12,3;UBERON:0005290,2.43e-12,3;UBERON:0010096,2.43e-12,3;UBERON:0002771,2.86e-10,2;UBERON:0002702,3.13e-10,2;UBERON:0001876,6.63e-10,2;UBERON:0001954,6.93e-10,2;UBERON:0003022,6.93e-10,2;UBERON:0002421,6.93e-10,2;UBERON:0002600,6.93e-10,2;UBERON:0001873,9.00e-10,2;UBERON:0010122,9.00e-10,2;UBERON:0002148,9.81e-10,2;UBERON:0006331,9.81e-10,2;UBERON:0009662,9.81e-10,2;UBERON:0000923,9.00e-07,560;UBERON:0010316,9.00e-07,560;UBERON:0005291,9.00e-07,560;UBERON:0006598,9.00e-07,560;UBERON:0010317,9.00e-07,560;UBERON:0002532,9.00e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0,0,0.958120975510189,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0.263504357079378,0.72038491523742,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,3.93874365949436,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.94813006139888,0,0,0,0.724999575434793,0,0,0,0,0,0,2.65722415744152,3.0149109656352,1.52581736317083,2.76448149828062,1.77328571372128,1.75508317723178,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,2.44858209304392,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15256706249988,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.547621515567972,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,3.97614844904652,2.86027152834309,0,0,0,0,0,2.00473536971481,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,4.52490347265427,1.98348902614035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,4.51497180137264,4.00610978260799,1.72022758707021,1.10929051536852,1.36612086471044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66859588222096,4.09206648562716,1.46151324344699,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,2.18379365327962,5.6678630530234,4.78901577171454,2.05116364240755,1.76450187355203,2.55881834117606,4.68279372332368,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,2.566428215499,1.56215619722769,4.34042272652487,1.77564268542939,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.91064876540519,0,0,0,2.24300118823545,2.89400203676536,0,0,0.235479278551542,3.61365856806804,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,1.76677620403451,0.594092800654172,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.286679166302903,0,1.90376172534561,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,1.34462894620464,0,0.23806443146374,0.129177819672012,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0.332660356546013,0,0,0,0,2.34640942403454,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p4@FAM18A | |||
}} |
Latest revision as of 04:50, 20 September 2015
Short description: | p4@FAM18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM18A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -108bp_to_ENST00000299866, NM_001079512, uc002dad.3, uc002daf.1, uc010bun.2, uc010buo.1, uc010uyr.1, uc010uys.1, uc010uyt.1, uc010uyu.1_5end |
EntrezGene: | FAM18A |
HGNC: | 20398 |
UniProt: | A6NH52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data