FFCP PHASE1:Hg19::chr16:77822511..77822522,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29315 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ6 | |||
|association_with_transcript=28bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | |||
|cluster_id=chr16:77822511..77822522,+ | |||
|coexpression_cluster_id=C3590 | |||
|description=CAGE_peak_3_at_VAT1L_5end | |||
|id=chr16:77822511..77822522,+ | |||
|ontology_enrichment_celltype=CL:0000192!4.90e-10!42;CL:0000514!4.90e-10!42;CL:0000393!4.95e-08!60;CL:0000211!4.95e-08!60;CL:0000359!1.40e-07!32;CL:0000055!4.96e-07!180;CL:0002539!9.22e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002539;3.13e-11;10!CL:0002322;3.13e-08;5!CL:0000359;4.60e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,9.98e-12,10;CL:0002322,5.66e-08,5;CL:0000047,2.81e-07,8;CL:0000359,3.21e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.06e-10;82!UBERON:0006241;9.98e-09;3!UBERON:0003057;9.98e-09;3!UBERON:0010122;5.99e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000125;1.98e-19;9!UBERON:0002308;1.98e-19;9!UBERON:0001017;1.03e-18;75!UBERON:0000073;7.48e-18;53!UBERON:0002616;7.48e-18;53!UBERON:0002298;4.35e-17;6!UBERON:0004732;2.31e-16;13!UBERON:0001016;1.39e-15;83!UBERON:0002780;2.55e-14;41!UBERON:0001890;2.55e-14;41!UBERON:0009663;2.58e-14;7!UBERON:0004733;4.10e-14;12!UBERON:0002028;4.10e-14;12!UBERON:0000955;4.55e-14;68!UBERON:0000369;3.36e-12;4!UBERON:0002435;3.36e-12;4!UBERON:0000204;3.36e-12;4!UBERON:0003528;6.00e-12;34!UBERON:0002020;6.00e-12;34!UBERON:0001893;2.73e-11;34!UBERON:0004237;3.13e-11;10!UBERON:0004695;3.13e-11;10!UBERON:0002111;3.13e-11;10!UBERON:0004178;3.13e-11;10!UBERON:0002420;6.19e-11;9!UBERON:0007245;6.19e-11;9!UBERON:0010009;6.19e-11;9!UBERON:0010011;6.19e-11;9!UBERON:0000454;6.19e-11;9!UBERON:0001869;1.20e-10;32!UBERON:0002784;3.22e-10;4!UBERON:0000947;1.07e-09;21!UBERON:0010191;1.07e-09;21!UBERON:0005383;1.33e-09;3!UBERON:0005382;1.33e-09;3!UBERON:0002791;1.42e-09;32!UBERON:0001896;1.69e-09;3!UBERON:0005290;1.69e-09;3!UBERON:0000988;2.71e-09;3!UBERON:0001135;3.08e-09;15!UBERON:0001894;6.29e-09;7!UBERON:0002240;9.98e-09;3!UBERON:0005174;9.98e-09;3!UBERON:0001137;9.98e-09;3!UBERON:0002680;1.10e-07;9!UBERON:0001895;1.10e-07;9!UBERON:0001873;5.99e-07;2!UBERON:0002148;6.51e-07;2!UBERON:0006331;6.51e-07;2!UBERON:0009662;6.51e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,1.80808358407193,1.46062018077475,4.87932798790507,0.246242116153576,0.204000691244253,0,0.286235987131057,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.263504357079378,0.392937226493138,0,0,0,0.174129737299267,0,0,0,0,0,1.72046919021225,0.694281003215189,0,0,0.275118041940067,0.417989933073621,0.516833518338658,1.42306505074684,0.33472061276467,0,0,0,0,0,0.357198913136319,0.44905874525234,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0.900273288253207,0.92747276314595,0.257640540045629,0.558350568994769,0.506328996723799,0.292311015483596,0.504867548488229,0.736399189138395,0.323292113637624,0.355009592516614,0.503760491138201,0.847802961552438,0,0,0,1.70763188581434,3.84336328132307,1.04574548582567,0.932949495138334,1.00928340350251,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,1.59562869950922,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,1.55776328755086,0.116210378459959,0,0,0,0.803701137152247,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,1.85938219718914,0.94443704049192,1.3940745403212,0,0,1.73986598415015,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,1.97859703341646,0.274537029736055,0.824686816419805,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.989838023675989,2.26016233240486,1.10273068709225,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,1.12678241012897,2.15117028306077,0.392996164052485,0.35667105148125,0.709522128141196,0,0,0.75894634753143,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0.403599414382095,5.11015485228392,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0.667852230137435,0,0.211125408127993,1.59398390600856,0.552567831062295,0.251932747854276,6.03385226762713,0,0,0,0,0,0.197286811273867,0,0,0,1.20598527610407,3.99227596002388,0,0,0,0,0,0,0,0,0.520874984799877,12.4003794013937,6.0298219312704,0,3.75969483766164,4.43321428430321,1.75508317723178,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.208843899010911,1.28062152663286,0,3.51396668588009,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38971111170799,0.411125773940253,0,0.823040347426423,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.313808538937,0,0,7.20504346451747,1.09524303113594,1.27746588066972,0,0,1.39641200636127,0.916641696046735,0,0.199679000498991,0.429226048136571,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0.953423842781029,2.41129722697529,1.10031549277787,1.24632101408756,0,0,1.33649024647654,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,13.3161445052397,5.95046707842105,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.500763722825999,11.4681839138014,5.43552352530576,6.83060432355218,1.38348634936231,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.955780602982214,0,1.24210365501008,1.24411862352257,0.53168342911599,0,0,0,0.406870733204662,0.909243296012797,0.537052785212442,1.39210127963548,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,2.42999305476938,0,0.157265941855896,0,0,0,0,0,0,0,0,0,1.8374728641192,6.16600560926011,0,0.319267718114302,0.205116364240755,0.504143392443436,0.345786262321089,0.645902582527404,5.71077681036618,0,0,0,0,0,1.3807198521202,0,0.0752103283492573,0,0,0,0,0,2.70150338473579,0,1.65349437200947,1.26831620387814,0.546974809018219,0,0,0,0,1.60710550763486,2.01770233331294,0,0,0,0,0,2.7867590520501,1.24968269769413,0,0,0.313972371402056,7.69866390588409,0,0.913158720509496,0,0,4.86040500401263,0,0,0,1.60342272946051,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0.233939463462106,0,0,0,2.41869136839944,0.301925687133347,0.0771741581079447,0,0,0,0,4.90771167787363,1.78227840196252,4.6492130034174,0,0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| |||
|short_description=p3@VAT1L | |||
}} |
Latest revision as of 22:53, 17 September 2015
Short description: | p3@VAT1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VAT1L_5end |
Coexpression cluster: | C3590_teratocarcinoma_medulla_putamen_locus_astrocytoma_retina_caudate |
Association with transcript: | 28bp_to_ENST00000302536, NM_020927, uc002ffg.1_5end |
EntrezGene: | VAT1L |
HGNC: | 29315 |
UniProt: | Q9HCJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 9.98e-12 | 10 |
embryonic stem cell | 5.66e-08 | 5 |
neuronal stem cell | 2.81e-07 | 8 |
vascular associated smooth muscle cell | 3.21e-07 | 32 |