FFCP PHASE1:Hg19::chr17:42767234..42767244,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124808 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26472 | |||
|TSSclassifier=strong | |||
|UniProt=Q96MW1 | |||
|association_with_transcript=-69bp_to_ENST00000315286,ENST00000457422,NM_001099225,NM_144609,uc002ihc.2,uc010czw.1_5end | |||
|cluster_id=chr17:42767234..42767244,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_CCDC43_5end | |||
|id=chr17:42767234..42767244,- | |||
|ontology_enrichment_celltype=CL:0000557!1.27e-25!71;CL:0002009!5.57e-25!65;CL:0000839!1.15e-24!70;CL:0002194!3.28e-23!63;CL:0000576!3.28e-23!63;CL:0000040!3.28e-23!63;CL:0000559!3.28e-23!63;CL:0000766!1.02e-22!76;CL:0002057!4.91e-20!42;CL:0000860!5.21e-18!45;CL:0000763!3.09e-17!112;CL:0000049!3.09e-17!112;CL:0002031!1.23e-15!124;CL:0000738!6.19e-15!140;CL:0002087!7.56e-13!119;CL:0000988!1.89e-12!182;CL:0000037!6.77e-12!172;CL:0000566!6.77e-12!172;CL:0002032!9.30e-12!165;CL:0000837!9.30e-12!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.96e-61;33!CL:0002057;2.96e-61;33!CL:0000473;2.10e-57;39!CL:0000234;2.10e-57;39!CL:0000576;3.23e-30;48!CL:0000766;6.21e-21;69!CL:0000763;1.15e-07;100!CL:0000235;1.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.64e-57,48;CL:0000234,1.64e-57,48;CL:0000860,3.97e-51,42;CL:0002057,3.97e-51,42;CL:0002194,1.47e-45,59;CL:0000576,1.47e-45,59;CL:0000040,1.47e-45,59;CL:0000559,1.47e-45,59;CL:0002009,5.14e-44,61;CL:0000839,1.47e-40,66;CL:0000557,6.28e-40,67;CL:0000766,4.92e-37,72;CL:0000763,5.14e-24,108;CL:0000049,5.14e-24,108;CL:0002087,2.03e-22,115;CL:0002031,2.16e-21,120;CL:0000738,1.33e-18,136;CL:0002032,2.41e-15,161;CL:0000837,2.41e-15,161;CL:0000037,1.33e-14,168;CL:0000988,9.81e-14,177;CL:0000235,1.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-43;42!CL:0000049;7.35e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.02e-22!86;UBERON:0002371!5.09e-21!80;UBERON:0004765!1.91e-18!101;UBERON:0001434!1.91e-18!101;UBERON:0002390!8.81e-16!102;UBERON:0003061!8.81e-16!102;UBERON:0002193!4.57e-13!112;UBERON:0002405!1.52e-11!115;UBERON:0002204!8.01e-11!167;UBERON:0001737!1.40e-08!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.46e-35,76;UBERON:0001474,2.73e-32,82;UBERON:0004765,3.05e-29,90;UBERON:0002405,3.12e-28,93;UBERON:0002390,1.10e-26,98;UBERON:0003061,1.10e-26,98;UBERON:0001434,4.14e-26,100;UBERON:0002193,5.14e-24,108;UBERON:0002204,1.10e-16,167;UBERON:0003081,2.82e-13,203;UBERON:0000926,1.00e-08,315;UBERON:0004120,1.00e-08,315;UBERON:0006603,1.00e-08,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0.223915474239924,0.647787332037959,0.515151135268373,0,0.377875943688809,0.485168122375632,2.09186133215116,6.98985409637104,8.05236564327269,1.1507695692886,1.0246428261164,1.41889337933151,6.20542225325913,21.9464792418501,10.8341189275473,0.564727018627814,1.63743690034707,2.24723484445085,0,0.962787081228281,0,0,1.39624560335142,0,0.870627715885752,0.56738522469114,0.622822248995575,1.7587406567972,3.65038042894141,4.99534342821768,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.649094787309367,0.696518949197069,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.946454400318751,0.505754070234305,0.482022059766964,0.330881918197182,0.217879444092406,0,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0.93733833986777,0,0.425325291727159,0,0,0,0,0.176096868026452,0.207328115540772,0,0.6312121671319,0.253991577168676,0.763976851116555,0,0,0,2.70308752059526,0.857479297891735,0,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.308419387605311,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0.165284915360978,0,0.127612712494584,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0,1.05650146756755,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.525774708558629,0,0,0,0,0,0.446342914883745,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0.415440338029185,0.2249738915515,0.77380195455795,0,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0,0.542999601753713,1.72844298240254,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0.545545977607678,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@CCDC43 | |||
}} |
Latest revision as of 22:27, 24 September 2015
Short description: | p4@CCDC43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC43_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -69bp_to_ENST00000315286, ENST00000457422, NM_001099225, NM_144609, uc002ihc.2, uc010czw.1_5end |
EntrezGene: | CCDC43 |
HGNC: | 26472 |
UniProt: | Q96MW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.64e-57 | 48 |
phagocyte | 1.64e-57 | 48 |
classical monocyte | 3.97e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.97e-51 | 42 |
monopoietic cell | 1.47e-45 | 59 |
monocyte | 1.47e-45 | 59 |
monoblast | 1.47e-45 | 59 |
promonocyte | 1.47e-45 | 59 |
macrophage dendritic cell progenitor | 5.14e-44 | 61 |
myeloid lineage restricted progenitor cell | 1.47e-40 | 66 |
granulocyte monocyte progenitor cell | 6.28e-40 | 67 |
myeloid leukocyte | 4.92e-37 | 72 |
myeloid cell | 5.14e-24 | 108 |
common myeloid progenitor | 5.14e-24 | 108 |
nongranular leukocyte | 2.03e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.16e-21 | 120 |
leukocyte | 1.33e-18 | 136 |
hematopoietic oligopotent progenitor cell | 2.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-15 | 161 |
hematopoietic stem cell | 1.33e-14 | 168 |
hematopoietic cell | 9.81e-14 | 177 |
macrophage | 1.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.46e-35 | 76 |
bone element | 2.73e-32 | 82 |
skeletal element | 3.05e-29 | 90 |
immune system | 3.12e-28 | 93 |
hematopoietic system | 1.10e-26 | 98 |
blood island | 1.10e-26 | 98 |
skeletal system | 4.14e-26 | 100 |
hemolymphoid system | 5.14e-24 | 108 |
musculoskeletal system | 1.10e-16 | 167 |
lateral plate mesoderm | 2.82e-13 | 203 |
mesoderm | 1.00e-08 | 315 |
mesoderm-derived structure | 1.00e-08 | 315 |
presumptive mesoderm | 1.00e-08 | 315 |