FFCP PHASE1:Hg19::chr17:4847640..4847689,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:4847640..4847689,+ | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_at_chr17:4847640..4847689,+ | |||
|id=chr17:4847640..4847689,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.95e-56!172;CL:0000566!2.95e-56!172;CL:0002032!2.04e-54!165;CL:0000837!2.04e-54!165;CL:0000988!6.26e-53!182;CL:0000738!1.30e-52!140;CL:0002031!1.02e-44!124;CL:0002087!7.08e-43!119;CL:0000763!1.82e-31!112;CL:0000049!1.82e-31!112;CL:0002057!2.25e-27!42;CL:0000766!5.01e-27!76;CL:0000860!7.92e-25!45;CL:0000839!3.54e-22!70;CL:0000557!5.80e-22!71;CL:0002009!3.49e-21!65;CL:0000838!2.27e-20!52;CL:0000542!2.62e-20!53;CL:0000051!2.62e-20!53;CL:0002194!3.87e-20!63;CL:0000576!3.87e-20!63;CL:0000040!3.87e-20!63;CL:0000559!3.87e-20!63;CL:0000791!3.98e-12!18;CL:0000789!3.98e-12!18;CL:0002420!3.98e-12!18;CL:0002419!3.98e-12!18;CL:0000790!3.98e-12!18;CL:0000084!8.76e-12!25;CL:0000827!8.76e-12!25;CL:0000134!5.59e-10!358;CL:0002320!6.76e-09!365;CL:0000945!2.08e-08!24;CL:0000826!2.08e-08!24;CL:0000625!2.24e-08!11;CL:0000094!2.49e-07!8;CL:0000219!3.06e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.15e-29;33!CL:0002057;3.15e-29;33!CL:0000473;3.42e-20;39!CL:0000234;3.42e-20;39!CL:0000576;1.28e-19;48!CL:0002087;2.69e-17;104!CL:0000791;9.55e-17;18!CL:0000789;9.55e-17;18!CL:0002419;9.55e-17;18!CL:0000766;1.42e-15;69!CL:0000084;9.71e-15;25!CL:0000542;3.56e-13;53!CL:0000738;3.02e-12;136!CL:0000625;2.26e-11;11!CL:0000763;4.06e-11;100!CL:0000988;2.83e-10;177!CL:0000094;8.53e-10;8!CL:0000945;8.37e-09;24!CL:0000081;6.56e-08;11!CL:0000219;5.27e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.45e-59,136;CL:0000037,1.59e-58,168;CL:0002032,1.66e-58,161;CL:0000837,1.66e-58,161;CL:0000988,4.57e-57,177;CL:0002031,3.29e-51,120;CL:0002087,5.03e-50,115;CL:0000860,1.10e-38,42;CL:0002057,1.10e-38,42;CL:0000473,4.00e-33,48;CL:0000234,4.00e-33,48;CL:0000763,2.31e-32,108;CL:0000049,2.31e-32,108;CL:0000766,9.47e-31,72;CL:0002009,1.16e-24,61;CL:0000839,3.18e-24,66;CL:0000557,3.20e-24,67;CL:0000838,3.97e-24,52;CL:0000542,2.17e-23,53;CL:0000051,2.17e-23,53;CL:0002194,3.24e-23,59;CL:0000576,3.24e-23,59;CL:0000040,3.24e-23,59;CL:0000559,3.24e-23,59;CL:0000791,9.92e-17,18;CL:0000789,9.92e-17,18;CL:0002420,9.92e-17,18;CL:0002419,9.92e-17,18;CL:0000790,9.92e-17,18;CL:0000084,8.64e-15,25;CL:0000827,8.64e-15,25;CL:0000134,3.50e-14,354;CL:0002320,3.06e-13,361;CL:0000625,2.39e-11,11;CL:0000219,4.95e-10,386;CL:0000094,7.50e-10,8;CL:0000945,9.59e-09,24;CL:0000826,9.59e-09,24;CL:0000081,5.08e-08,11;CL:0002393,6.91e-08,9;CL:0002397,6.91e-08,9;CL:0000723,4.10e-07,433;CL:0000034,9.37e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-27;42!CL:0000790;9.55e-17;18!CL:0000051;3.56e-13;53!CL:0000049;5.51e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.09e-30!102;UBERON:0003061!4.09e-30!102;UBERON:0002193!5.84e-26!112;UBERON:0002371!3.76e-18!80;UBERON:0001474!3.73e-15!86;UBERON:0002405!3.10e-14!115;UBERON:0004765!8.68e-12!101;UBERON:0001434!8.68e-12!101;UBERON:0000178!2.13e-10!15;UBERON:0000179!2.13e-10!15;UBERON:0000463!2.13e-10!15;UBERON:0002384!3.68e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.95e-14;15!UBERON:0000179;3.95e-14;15!UBERON:0000463;3.95e-14;15!UBERON:0002390;1.19e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-36,98;UBERON:0003061,1.28e-36,98;UBERON:0002193,5.49e-33,108;UBERON:0002405,6.19e-22,93;UBERON:0002371,2.96e-20,76;UBERON:0001474,1.38e-17,82;UBERON:0004765,1.24e-14,90;UBERON:0000178,3.02e-14,15;UBERON:0000179,3.02e-14,15;UBERON:0000463,3.02e-14,15;UBERON:0002384,5.61e-12,371;UBERON:0001434,1.10e-11,100;UBERON:0003081,1.40e-08,203 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2261449196722,16.666419658339,14.2466514177759,12.194292582316,8.06041736004147,2.94150634300544,1.83884244895785,1.204823675113,0.739508020333575,0.619737604642413,0.426507697462265,0.587200878669695,2.76997704265939,2.60707781711184,1.73608696572681,0.223915474239924,0.32389366601898,0,6.54292074508041,4.91238726795452,6.79235371325885,19.0591810262661,16.446715520873,20.7503268499719,8.63077176966451,11.0149103807513,10.8781825748749,12.0660988257816,14.2006630388442,24.3767675869815,14.8711448238658,17.73889975376,19.7756666311674,21.4258724659632,18.2929545433373,19.1801137739712,3.62836430205388,3.98927315243264,4.68847225585964,37.1467825444588,44.2560475259089,33.0095791967655,7.5374599577023,9.90817544998383,12.8141418376019,25.4267791106015,40.5105399586321,38.291948880347,4.22510572623884,3.4016687994407,2.72556239160889,1.79725809834392,2.70318407114711,2.25015821375912,15.1056754182862,13.1285006951399,11.8731699947012,3.51992488922645,2.73069305631066,6.22656477704488,2.13365111283254,4.00395987036012,2.29900975981793,5.2883589822789,4.77026877267682,1.70763890732835,2.93618594685469,2.29363936875137,0,2.24203425192614,0,2.55722701147983,5.50215067848831,5.75684197198626,25.7467202901644,7.17028986593899,9.9424039204294,5.84480185223734,35.9855775739111,8.83817722424511,11.5197625183483,11.9153700056607,35.7374782034634,29.6535312436522,9.70183637161689,12.9884508359349,9.56350182925673,5.48660283699624,6.1534390460634,7.31748666634838,29.9136664721575,7.2811893784365,10.3088233644789,8.8556892206826,13.061181987288,15.626002892554,19.0090408889675,9.33565738282191,10.8788619481256,13.742379920758,11.1285308460688,11.4957919568947,4.63695509416885,5.61624411145365,4.34473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,3.64295288292542,1.85392221392215,0.97364218096405,0.522389211897802,0.398873881556595,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.4409502769828,81.4338554711483,0.872188104285069,0.496971951695318,0,0,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0.339121184620975,3.28543450377605,1.63647672354501,2.29443676311203,0.365921118388786,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0,0,0.220587945464788,0,0,0.269662616320329,0.196221465125346,0,0,0,2.057870056657,1.47008711385542,0,0,0,0.441463099414651,0,0,1.75600456653801,2.24803506515239,4.02115889646523,1.574003567695,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0.93733833986777,0.16798212819886,0.708875486211932,2.05984602216551,2.3250715081117,3.06706143332169,2.95597942737566,0.968532774145487,1.65862492432618,0.576479813667846,1.2624243342638,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0.791951872933429,3.61727252471503,2.61460037580088,12.4966238977571,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,0,0,8.85472637548865,5.71389204585589,6.46882724578552,4.36366323351144,0,0,0,0.167516265334349,0,59.9205619157746,62.8239064328452,62.1623270154053,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,4.54889657470352,5.1771408196468,4.26910231213777,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,3.00759705454927,1.19705285616665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.5686127061494,0,0.984043937099117,0.325378394664303,1.44257416306811,0,0,1.72279661398852,5.85054221432869,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0.192190067365106,0.893288987462089,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0.196498082026242,0,0,0,0,0,0,1.73199802905922,3.35151137767894,0,0.941438007767792,1.29151611801369,5.05414427002877,1.7737206141467,0.229723400206959,15.7308758861972,25.2330278356984,24.494829048489,11.9115887728895,11.5181436464134,16.2118327798179,15.1208802426672,12.6900028207083,0.747768497892312,0,0,0.185803175125719,0,0.284567373393656,1.91311527274587,1.79621434289535,0.957526850661834,14.6054772079479,0.649243880549111,0.280797178113459,0.228234679033192,0.313359791546046,2.50634477090067,2.03150133361924,0.321176150207399,0.201799707191048,2.55507742614196,2.40453741329035,0,0.894704431569664,0.667396566847634,0.19538809540204,0.835218521685727,0,2.43410110628385,2.99764771198038,1.4098700508785,0,0.293016358543788,0.485442086998054,41.1226087983895,0,2.62618933211459,0,4.60741053148848,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0.102268682502155,2.8309505256046,0,0,0,2.04628948090749,0,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p@chr17:4847640..4847689,+ | |||
}} |
Latest revision as of 18:42, 25 July 2015
Short description: | p@chr17:4847640..4847689, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4847640..4847689, + |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-36 | 98 |
blood island | 1.28e-36 | 98 |
hemolymphoid system | 5.49e-33 | 108 |
immune system | 6.19e-22 | 93 |
bone marrow | 2.96e-20 | 76 |
bone element | 1.38e-17 | 82 |
skeletal element | 1.24e-14 | 90 |
blood | 3.02e-14 | 15 |
haemolymphatic fluid | 3.02e-14 | 15 |
organism substance | 3.02e-14 | 15 |
connective tissue | 5.61e-12 | 371 |
skeletal system | 1.10e-11 | 100 |
lateral plate mesoderm | 1.40e-08 | 203 |