FFCP PHASE1:Hg19::chr18:65337698..65337712,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:65337698..65337712,+ | |||
|description=CAGE_peak_at_chr18:65337698..65337712,+ | |||
|id=chr18:65337698..65337712,+ | |||
|ontology_enrichment_celltype=CL:0000057!8.29e-31!75;CL:0002620!5.91e-27!23;CL:0000055!8.96e-26!180;CL:0002556!5.79e-14!6;CL:0000192!2.41e-11!42;CL:0000514!2.41e-11!42;CL:0002552!5.19e-11!5;CL:0000359!1.52e-09!32;CL:0000048!2.28e-08!430;CL:0000187!4.04e-08!54;CL:0000723!4.34e-08!436;CL:1000306!4.45e-08!4;CL:0002547!4.45e-08!4;CL:0000034!9.97e-08!444;CL:0000680!1.57e-07!57;CL:0000056!1.57e-07!57;CL:0000355!1.57e-07!57;CL:0002367!2.44e-07!2;CL:0000183!3.57e-07!59;CL:0000393!5.27e-07!60;CL:0000211!5.27e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002552;2.45e-26;5!CL:0002556;4.05e-22;6!CL:0002574;2.38e-15;1!CL:1000306;3.80e-15;4!CL:0002547;3.80e-15;4!CL:0002363;1.67e-08;2!CL:0000057;3.40e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,2.16e-26,5;CL:0002556,3.51e-22,6;CL:0000057,1.46e-21,76;CL:0002574,2.06e-15,1;CL:1000306,3.94e-15,4;CL:0002547,3.94e-15,4;CL:0002363,1.73e-08,2;CL:0000008,1.73e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.67e-08;2 | |||
|ontology_enrichment_disease=DOID:17!5.39e-16!5;DOID:450!5.39e-16!5;DOID:66!5.39e-16!5;DOID:423!5.39e-16!5;DOID:0080000!5.39e-16!5;DOID:11722!5.39e-16!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!6.74e-19!95;UBERON:0001758!5.79e-14!6;UBERON:0003672!5.79e-14!6;UBERON:0002097!6.50e-14!40;UBERON:0004573!2.45e-13!33;UBERON:0004571!2.45e-13!33;UBERON:0000914!7.24e-13!83;UBERON:0002329!7.24e-13!83;UBERON:0003077!7.24e-13!83;UBERON:0003059!7.24e-13!83;UBERON:0007282!7.24e-13!83;UBERON:0009618!7.24e-13!83;UBERON:0007285!7.24e-13!83;UBERON:0002199!5.73e-12!45;UBERON:0002416!5.73e-12!45;UBERON:0001637!1.73e-11!42;UBERON:0003509!1.73e-11!42;UBERON:0004572!1.73e-11!42;UBERON:0003129!2.71e-10!11;UBERON:0001444!1.27e-08!48;UBERON:0000075!1.37e-08!13;UBERON:0005944!1.37e-08!13;UBERON:0004288!1.37e-08!13;UBERON:0003089!1.37e-08!13;UBERON:0000415!4.45e-08!4;UBERON:0007240!4.45e-08!4;UBERON:0005742!4.45e-08!4;UBERON:0005734!4.45e-08!4;UBERON:0004664!4.45e-08!4;UBERON:0004663!4.45e-08!4;UBERON:0000165!5.09e-08!28;UBERON:0000930!5.09e-08!28;UBERON:0000475!8.50e-08!365;UBERON:0004290!1.17e-07!70;UBERON:0005969!2.44e-07!2;UBERON:0003956!2.44e-07!2;UBERON:0001981!4.27e-07!60;UBERON:0007500!4.27e-07!60;UBERON:0004537!4.27e-07!60;UBERON:0006965!4.27e-07!60;UBERON:0001870!5.00e-07!2;UBERON:0001828!7.34e-07!8;UBERON:0001134!7.67e-07!61;UBERON:0002036!7.67e-07!61;UBERON:0003082!7.67e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;4.05e-22;6!UBERON:0003672;4.05e-22;6!UBERON:0003129;4.64e-19;7!UBERON:0000165;3.74e-18;28!UBERON:0001828;9.96e-17;8!UBERON:0004797;3.80e-15;4!UBERON:0000415;3.80e-15;4!UBERON:0007240;3.80e-15;4!UBERON:0005742;3.80e-15;4!UBERON:0005734;3.80e-15;4!UBERON:0004664;3.80e-15;4!UBERON:0004663;3.80e-15;4!UBERON:0011137;2.30e-12;11!UBERON:0010323;2.30e-12;11!UBERON:0001444;9.62e-12;48!UBERON:0007811;6.32e-11;52!UBERON:0000033;1.10e-10;50!UBERON:0003729;1.57e-10;13!UBERON:0000153;4.39e-09;54!UBERON:0000075;1.12e-08;16!UBERON:0003566;1.67e-08;2!UBERON:0001777;1.67e-08;2!UBERON:0000161;2.25e-07;19!UBERON:0000166;2.25e-07;19!UBERON:0000344;4.96e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,3.51e-22,6;UBERON:0003672,3.51e-22,6;UBERON:0003129,4.10e-19,7;UBERON:0000165,1.45e-17,29;UBERON:0000930,1.45e-17,29;UBERON:0001828,9.19e-17,8;UBERON:0000415,3.94e-15,4;UBERON:0007240,3.94e-15,4;UBERON:0005742,3.94e-15,4;UBERON:0005734,3.94e-15,4;UBERON:0004664,3.94e-15,4;UBERON:0004663,3.94e-15,4;UBERON:0001444,7.33e-14,49;UBERON:0010323,2.13e-12,11;UBERON:0000033,4.56e-12,56;UBERON:0000153,7.52e-11,62;UBERON:0007811,7.52e-11,62;UBERON:0003102,8.02e-11,99;UBERON:0003729,1.49e-10,13;UBERON:0011137,7.26e-10,14;UBERON:0004797,4.76e-09,7;UBERON:0000075,1.06e-08,16;UBERON:0003566,1.73e-08,2;UBERON:0001777,1.73e-08,2;UBERON:0004573,4.41e-07,33;UBERON:0004571,4.41e-07,33;UBERON:0000344,4.81e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91300197789081,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0,0,0.70296429550139,0.936480230490962,0,0.597794722207204,0,0,0,5.9204709663919,1.96534907698829,2.06651562351531,0,0.247266929278557,0,0,4.20840284885166,1.62654075833553,4.98715407871529,0.438977620880838,0,0.45071417671979,0,0.179389635688862,0.640672166455702,0.423863802319124,2.70081986475962,0.824420233907511,0.515281080091258,0.744467425326359,0,0.292311015483596,1.26216887122057,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28065813717227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,1.39013783148933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.282810863907425,0,1.10273068709225,0,0.438450885253763,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879356221798103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:65337698..65337712,+ | |||
}} |
Latest revision as of 01:57, 26 July 2015
Short description: | p@chr18:65337698..65337712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:65337698..65337712, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 2.16e-26 | 5 |
fibroblast of periodontium | 3.51e-22 | 6 |
fibroblast | 1.46e-21 | 76 |
stromal cell of pancreas | 2.06e-15 | 1 |
fibroblast of tunica adventitia of artery | 3.94e-15 | 4 |
fibroblast of the aortic adventitia | 3.94e-15 | 4 |
keratocyte | 1.73e-08 | 2 |
migratory cranial neural crest cell | 1.73e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
periodontium | 3.51e-22 | 6 |
dentition | 3.51e-22 | 6 |
skull | 4.10e-19 | 7 |
mouth | 1.45e-17 | 29 |
stomodeum | 1.45e-17 | 29 |
gingiva | 9.19e-17 | 8 |
artery wall | 3.94e-15 | 4 |
tunica adventitia of artery | 3.94e-15 | 4 |
adventitia | 3.94e-15 | 4 |
tunica adventitia of blood vessel | 3.94e-15 | 4 |
aorta tunica adventitia | 3.94e-15 | 4 |
aorta wall | 3.94e-15 | 4 |
subdivision of head | 7.33e-14 | 49 |
cranial skeletal system | 2.13e-12 | 11 |
head | 4.56e-12 | 56 |
anterior region of body | 7.52e-11 | 62 |
craniocervical region | 7.52e-11 | 62 |
surface structure | 8.02e-11 | 99 |
mouth mucosa | 1.49e-10 | 13 |
axial skeletal system | 7.26e-10 | 14 |
blood vessel layer | 4.76e-09 | 7 |
subdivision of skeletal system | 1.06e-08 | 16 |
head connective tissue | 1.73e-08 | 2 |
substantia propria of cornea | 1.73e-08 | 2 |
systemic artery | 4.41e-07 | 33 |
systemic arterial system | 4.41e-07 | 33 |
mucosa | 4.81e-07 | 20 |