FFCP PHASE1:Hg19::chr19:10541412..10541425,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8780 | |||
|TSSclassifier=strong | |||
|UniProt=P27815 | |||
|association_with_transcript=-95bp_to_ENST00000293683,NM_001111308,uc002mok.2_5end | |||
|cluster_id=chr19:10541412..10541425,+ | |||
|description=CAGE_peak_5_at_PDE4A_5end | |||
|id=chr19:10541412..10541425,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.29e-18!42;CL:0000557!5.77e-18!71;CL:0000839!3.55e-17!70;CL:0002009!8.48e-17!65;CL:0000860!4.88e-16!45;CL:0000766!5.05e-16!76;CL:0002194!5.87e-16!63;CL:0000576!5.87e-16!63;CL:0000040!5.87e-16!63;CL:0000559!5.87e-16!63;CL:0000763!4.65e-13!112;CL:0000049!4.65e-13!112;CL:0000738!8.72e-11!140;CL:0002031!5.29e-10!124;CL:0002087!2.51e-09!119;CL:0002032!1.56e-08!165;CL:0000837!1.56e-08!165;CL:0000037!1.72e-08!172;CL:0000566!1.72e-08!172;CL:0000988!2.01e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-20;33!CL:0002057;1.41e-20;33!CL:0000473;3.77e-17;39!CL:0000234;3.77e-17;39!CL:0000576;5.95e-16;48!CL:0000766;6.79e-15;69!CL:0000097;1.00e-09;5!CL:0000163;4.03e-08;9!CL:0002393;9.91e-08;6!CL:0002397;9.91e-08;6!CL:0002087;1.46e-07;104!CL:0000763;9.14e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-29,42;CL:0002057,1.21e-29,42;CL:0000473,1.76e-27,48;CL:0000234,1.76e-27,48;CL:0000839,1.04e-25,66;CL:0000557,3.23e-25,67;CL:0000766,4.90e-25,72;CL:0002194,1.13e-20,59;CL:0000576,1.13e-20,59;CL:0000040,1.13e-20,59;CL:0000559,1.13e-20,59;CL:0002009,8.52e-20,61;CL:0000738,1.51e-19,136;CL:0000763,1.67e-19,108;CL:0000049,1.67e-19,108;CL:0002031,1.35e-16,120;CL:0000037,3.58e-16,168;CL:0002032,3.50e-15,161;CL:0000837,3.50e-15,161;CL:0000988,7.61e-15,177;CL:0002087,7.72e-15,115;CL:0000097,9.33e-10,5;CL:0002028,9.33e-10,5;CL:0000163,3.76e-08,9;CL:0002393,1.73e-07,9;CL:0002397,1.73e-07,9;CL:0000134,4.15e-07,354;CL:0002320,9.22e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.43e-14!80;UBERON:0002390!9.91e-12!102;UBERON:0003061!9.91e-12!102;UBERON:0001474!3.08e-11!86;UBERON:0002405!5.32e-11!115;UBERON:0004765!2.15e-10!101;UBERON:0001434!2.15e-10!101;UBERON:0002193!2.86e-10!112;UBERON:0003081!7.54e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-21,76;UBERON:0002390,1.06e-20,98;UBERON:0003061,1.06e-20,98;UBERON:0002193,1.87e-19,108;UBERON:0001474,2.78e-19,82;UBERON:0002405,4.14e-19,93;UBERON:0004765,6.23e-17,90;UBERON:0001434,1.57e-14,100;UBERON:0003081,5.74e-11,203;UBERON:0002204,4.00e-08,167 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.704772020479856,0,1.78784437770915,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0.382067028739756,0.328402357799783,0.550975469195755,0.393364276848904,0,2.32224184974114,0,0,0,0,0,0,1.66198622559563,1.20326668482085,2.17010870715852,0.895661896959697,0.971680998056939,0.77272670290256,1.59938062657521,0.377875943688809,0.727752183563449,1.85943229524548,2.87817521615278,1.85823822537062,2.3015391385772,1.2808035326455,0,1.37898272294647,2.5819387343353,0,1.12945403725563,0.818718450173537,0.674170453335254,2.75475503133812,0.641858054152187,0.639337125799041,1.31940520074686,1.59570926097305,0.426224750532694,4.06292934080018,1.70215567407342,1.24564449799115,1.25624332628372,0.521482918420201,0.217188844705117,0,1.10483290796269,1.26584954976354,0.633765858935825,0.850417199860174,1.04829322754188,0.673971786878971,0.450530678524519,0.48217676009124,0.855038231223746,1.39241674039363,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.334372990781356,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.25618263945135,0.390178042679635,1.80881695064044,0.552700035571697,0,0,0,0,0.226618685395132,0,0,0,0.637130828648193,0,0,0,0.127986611154418,0,0,0.821127996921047,0.403213486449465,0.802320587350522,1.15859523106239,0,0,0.511450247374121,0,0,0.434539556882471,0.795285947051099,0.973269740605272,0,0,0.087834785693126,0.392937226493138,0.364295288292542,0,0,0.348259474598534,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0,0.275118041940067,0.417989933073621,0,0.71153252537342,0,0.805658634218294,0.760272105718513,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.673588117878509,0.225222960966644,0,0,0.549605231791222,0,0,0,0.496971951695318,0.379891534993739,0,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0.622422070799533,0.404132016209064,0.326923806226917,0,0,0,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.619954687054593,0,0.741800787835671,0,0,0,0.625592599359821,0.554128230968366,0,0.612975591598039,0.45071417671979,0.226864366320042,0.358779271377724,0,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.184099797284599,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,2.94017422771084,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0.738651018262192,1.17002132569619,0.297262324577456,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,1.32072651019839,1.4512968087854,2.16179930125442,4.29224273649692,0.190493682876507,2.29193055334967,2.34434894420094,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.129271715757778,0,0.845302752556,0.26593811658487,2.08014873822732,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.599837947092342,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,1.45710687191585,0.788123040807709,1.50939302401662,2.05348858047597,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0.542530047399471,0,0.356857977594324,0.157702415033935,0.937131319941706,0.601892199455438,0,2.0694614258501,0,0.553107505625109,0.347534457872331,0,0.343143423810856,1.24060815673732,0.647142602455851,1.17400313583789,0,1.66435439510497,0.604780586659361,0.248107807818777,0.460385919864187,0,0.384417447767103,1.53512174720011,0.965123526861645,0,0.308419387605311,0.532685175939381,0.246381468041427,0,0,0.362578348774867,0,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0,0.435050081742686,0.170453254832202,0.0890320356467374,0,0.768760269460425,0.510450849978337,0.30347334256665,0,0,0,0.924100740528266,0,0,0.55597265731176,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.117812402345686,0.404364963146632,3.17020642346017,0.842516912477962,0.48763373908959,0.487426979262569,0,0.272999822815972,0.282810863907425,0,1.10273068709225,0.66343897524122,1.31535265576129,0,0,0.405820753925408,0,0,0.430234056612155,0.196498082026242,0,0,0.211107635297664,0.658589785919804,0.379473173765715,1.39973888097993,0.192444225451024,0,0,0.188287601553558,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0.735120647943095,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0.447352215784832,0.166849141711909,0,0.556812347790485,0,0.270455678475983,0,0,0,0.586032717087576,0,0,0.852408440419239,0.47748896947538,0,0,0,0.281338832821026,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| |||
|short_description=p5@PDE4A | |||
}} |
Latest revision as of 01:34, 25 September 2015
Short description: | p5@PDE4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDE4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -95bp_to_ENST00000293683, NM_001111308, uc002mok.2_5end |
EntrezGene: | PDE4A |
HGNC: | 8780 |
UniProt: | P27815 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.21e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-29 | 42 |
defensive cell | 1.76e-27 | 48 |
phagocyte | 1.76e-27 | 48 |
myeloid lineage restricted progenitor cell | 1.04e-25 | 66 |
granulocyte monocyte progenitor cell | 3.23e-25 | 67 |
myeloid leukocyte | 4.90e-25 | 72 |
monopoietic cell | 1.13e-20 | 59 |
monocyte | 1.13e-20 | 59 |
monoblast | 1.13e-20 | 59 |
promonocyte | 1.13e-20 | 59 |
macrophage dendritic cell progenitor | 8.52e-20 | 61 |
leukocyte | 1.51e-19 | 136 |
myeloid cell | 1.67e-19 | 108 |
common myeloid progenitor | 1.67e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 1.35e-16 | 120 |
hematopoietic stem cell | 3.58e-16 | 168 |
hematopoietic oligopotent progenitor cell | 3.50e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.50e-15 | 161 |
hematopoietic cell | 7.61e-15 | 177 |
nongranular leukocyte | 7.72e-15 | 115 |
mast cell | 9.33e-10 | 5 |
basophil mast progenitor cell | 9.33e-10 | 5 |
endocrine cell | 3.76e-08 | 9 |
intermediate monocyte | 1.73e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.73e-07 | 9 |
mesenchymal cell | 4.15e-07 | 354 |
connective tissue cell | 9.22e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.25e-21 | 76 |
hematopoietic system | 1.06e-20 | 98 |
blood island | 1.06e-20 | 98 |
hemolymphoid system | 1.87e-19 | 108 |
bone element | 2.78e-19 | 82 |
immune system | 4.14e-19 | 93 |
skeletal element | 6.23e-17 | 90 |
skeletal system | 1.57e-14 | 100 |
lateral plate mesoderm | 5.74e-11 | 203 |
musculoskeletal system | 4.00e-08 | 167 |