FFCP PHASE1:Hg19::chr8:67579326..67579368,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:67579326..67579368,-
|short_description=p2@VCPIP1
|description=CAGE_peak_2_at_VCPIP1_5end
|association_with_transcript=83bp_to_ENST00000310421,NM_025054,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80124 | |EntrezGene=80124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30897 | |HGNC=30897 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JH7 | |UniProt=Q96JH7 | ||
|association_with_transcript=83bp_to_ENST00000310421,NM_025054,uc003xwn.2_5end | |||
|cluster_id=chr8:67579326..67579368,- | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_2_at_VCPIP1_5end | |||
|id=chr8:67579326..67579368,- | |||
|ontology_enrichment_celltype=CL:0000037!3.56e-62!172;CL:0000566!3.56e-62!172;CL:0002032!7.43e-59!165;CL:0000837!7.43e-59!165;CL:0000988!6.73e-58!182;CL:0000738!1.16e-53!140;CL:0002031!6.23e-45!124;CL:0000763!1.16e-43!112;CL:0000049!1.16e-43!112;CL:0002087!5.66e-43!119;CL:0000766!2.11e-36!76;CL:0000557!1.54e-32!71;CL:0000839!6.92e-31!70;CL:0002009!2.51e-29!65;CL:0002194!1.83e-28!63;CL:0000576!1.83e-28!63;CL:0000040!1.83e-28!63;CL:0000559!1.83e-28!63;CL:0002057!6.32e-25!42;CL:0000860!1.39e-22!45;CL:0000542!5.06e-13!53;CL:0000051!5.06e-13!53;CL:0000838!5.79e-13!52;CL:0000134!5.38e-11!358;CL:0002320!1.06e-10!365;CL:0000791!9.49e-08!18;CL:0000789!9.49e-08!18;CL:0002420!9.49e-08!18;CL:0002419!9.49e-08!18;CL:0000790!9.49e-08!18;CL:0000219!8.10e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-22;33!CL:0002057;4.46e-22;33!CL:0000576;1.77e-21;48!CL:0000473;6.15e-21;39!CL:0000234;6.15e-21;39!CL:0000766;1.98e-19;69!CL:0000763;3.98e-16;100!CL:0002087;3.13e-14;104!CL:0000738;3.86e-14;136!CL:0000988;2.50e-11;177!CL:0000791;6.25e-09;18!CL:0000789;6.25e-09;18!CL:0002419;6.25e-09;18!CL:0000542;1.10e-08;53!CL:0000094;1.08e-07;8!CL:0000236;2.34e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.85e-73,168;CL:0002032,5.70e-69,161;CL:0000837,5.70e-69,161;CL:0000988,6.17e-68,177;CL:0000738,5.70e-64,136;CL:0000763,7.73e-54,108;CL:0000049,7.73e-54,108;CL:0002031,1.37e-53,120;CL:0002087,2.84e-51,115;CL:0000766,6.30e-47,72;CL:0000557,3.27e-42,67;CL:0000839,3.88e-40,66;CL:0002009,2.30e-38,61;CL:0002194,2.38e-37,59;CL:0000576,2.38e-37,59;CL:0000040,2.38e-37,59;CL:0000559,2.38e-37,59;CL:0000473,4.22e-32,48;CL:0000234,4.22e-32,48;CL:0000860,2.90e-29,42;CL:0002057,2.90e-29,42;CL:0000134,3.75e-14,354;CL:0002320,1.09e-13,361;CL:0000542,2.70e-13,53;CL:0000051,2.70e-13,53;CL:0000838,3.25e-13,52;CL:0000219,1.43e-09,386;CL:0000791,6.75e-09,18;CL:0000789,6.75e-09,18;CL:0002420,6.75e-09,18;CL:0002419,6.75e-09,18;CL:0000790,6.75e-09,18;CL:0000094,1.22e-07,8;CL:0000236,3.08e-07,14;CL:0002393,9.77e-07,9;CL:0002397,9.77e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-21;42!CL:0000049;1.97e-15;108!CL:0000790;6.25e-09;18!CL:0000051;1.10e-08;53 | |||
|ontology_enrichment_disease=DOID:8692!6.24e-08!31;DOID:1240!9.01e-08!39;DOID:2531!1.52e-07!51;DOID:0060083!1.52e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.33e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.08e-08,31;DOID:1240,1.78e-07,39;DOID:2531,3.09e-07,51;DOID:0060083,3.09e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.93e-35!102;UBERON:0003061!3.93e-35!102;UBERON:0002193!3.04e-32!112;UBERON:0002371!6.92e-27!80;UBERON:0001474!2.34e-23!86;UBERON:0004765!9.08e-20!101;UBERON:0001434!9.08e-20!101;UBERON:0002405!3.52e-18!115;UBERON:0007023!9.49e-12!115;UBERON:0002384!3.13e-10!375;UBERON:0003081!3.02e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.56e-44,98;UBERON:0003061,3.56e-44,98;UBERON:0002193,3.50e-40,108;UBERON:0002371,1.49e-35,76;UBERON:0002405,2.69e-34,93;UBERON:0001474,9.14e-32,82;UBERON:0004765,6.30e-29,90;UBERON:0001434,9.25e-25,100;UBERON:0002384,6.56e-13,371;UBERON:0007023,3.45e-12,114;UBERON:0003081,1.86e-11,203 | |||
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| ||
|short_description=p2@VCPIP1 | |||
}} | }} |
Latest revision as of 21:32, 18 September 2015
Short description: | p2@VCPIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VCPIP1_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 83bp_to_ENST00000310421, NM_025054, uc003xwn.2_5end |
EntrezGene: | VCPIP1 |
HGNC: | 30897 |
UniProt: | Q96JH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.56e-44 | 98 |
blood island | 3.56e-44 | 98 |
hemolymphoid system | 3.50e-40 | 108 |
bone marrow | 1.49e-35 | 76 |
immune system | 2.69e-34 | 93 |
bone element | 9.14e-32 | 82 |
skeletal element | 6.30e-29 | 90 |
skeletal system | 9.25e-25 | 100 |
connective tissue | 6.56e-13 | 371 |
adult organism | 3.45e-12 | 114 |
lateral plate mesoderm | 1.86e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.08e-08 | 31 |
leukemia | 1.78e-07 | 39 |
hematologic cancer | 3.09e-07 | 51 |
immune system cancer | 3.09e-07 | 51 |