FFCP PHASE1:Hg19::chr1:3385085..3385094,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27237 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15515 | |||
|TSSclassifier=strong | |||
|UniProt=B0QZD3 | |||
|association_with_transcript=-13bp_to_ENST00000445297_5end | |||
|cluster_id=chr1:3385085..3385094,+ | |||
|description=CAGE_peak_15_at_ARHGEF16_5end | |||
|id=chr1:3385085..3385094,+ | |||
|ontology_enrichment_celltype=CL:0000575!5.52e-15!2;CL:0002202!7.87e-13!9;CL:0002632!7.87e-13!9;CL:0000068!1.48e-10!3;CL:0000069!1.48e-10!3;CL:0000307!1.48e-10!3;CL:0002621!1.48e-10!3;CL:0000377!1.48e-10!3;CL:0002541!1.96e-10!3;CL:0002328!2.59e-10!3;CL:0002076!2.49e-09!43;CL:0002368!6.39e-09!13;CL:1001319!1.75e-08!1;CL:1000600!1.75e-08!1;CL:0002379!2.89e-08!1;CL:0002336!5.43e-08!1;CL:0002261!5.43e-08!1;CL:0002170!5.43e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000307;8.00e-18;3!CL:0000239;1.03e-17;3!CL:1000615;1.03e-17;3!CL:0002306;1.03e-17;3!CL:0002621;1.03e-17;3!CL:0002202;7.91e-07;9!CL:0002632;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.00e-18,3;CL:0000069,8.00e-18,3;CL:0000307,8.00e-18,3;CL:0000377,8.00e-18,3;CL:0002621,9.46e-18,3;CL:0000239,1.12e-17,3;CL:1000615,1.12e-17,3;CL:0002306,1.12e-17,3;CL:0002202,7.91e-07,9;CL:0002632,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;8.00e-18;3 | |||
|ontology_enrichment_disease=DOID:3620!2.89e-08!1;DOID:3565!2.89e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.69e-17!14;UBERON:0000158!2.69e-17!14;UBERON:0007196!2.48e-12!14;UBERON:0001558!2.48e-12!14;UBERON:0000064!4.03e-11!219;UBERON:0001949!1.48e-10!3;UBERON:0000476!1.96e-10!3;UBERON:0000920!1.96e-10!3;UBERON:0004815!2.59e-10!3;UBERON:0002031!2.59e-10!3;UBERON:0000478!6.98e-10!24;UBERON:0003126!1.53e-09!7;UBERON:0001005!1.53e-09!7;UBERON:0003124!1.72e-09!7;UBERON:0000305!1.93e-09!7;UBERON:0004645!1.75e-08!1;UBERON:0001256!1.75e-08!1;UBERON:0001259!1.75e-08!1;UBERON:0004923!2.42e-08!57;UBERON:0004871!2.56e-08!8;UBERON:0002185!6.04e-08!4;UBERON:0001301!6.24e-08!1;UBERON:0000964!6.26e-08!4;UBERON:0004348!6.26e-08!4;UBERON:0005427!6.26e-08!4;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0005178!7.14e-07!34;UBERON:0002224!7.14e-07!34;UBERON:0003103!8.69e-07!69;UBERON:0006555!8.82e-07!17;UBERON:0005103!8.82e-07!17;UBERON:0000083!8.82e-07!17;UBERON:0009201!8.82e-07!17;UBERON:0004819!8.82e-07!17;UBERON:0006553!8.82e-07!17;UBERON:0003074!8.82e-07!17;UBERON:0003060!8.82e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.03e-17;3!UBERON:0007685;1.03e-17;3!UBERON:0004134;1.03e-17;3!UBERON:0001949;1.03e-17;3!UBERON:0003126;2.03e-08;7!UBERON:0001005;2.03e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001828;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.46e-18,3;UBERON:0006853,1.12e-17,3;UBERON:0007685,1.12e-17,3;UBERON:0004134,1.12e-17,3;UBERON:0003126,2.03e-08,7;UBERON:0001005,2.03e-08,7;UBERON:0003350,1.69e-07,8;UBERON:0001828,1.69e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,1.34324852833307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26712737437943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.89543595472072,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@ARHGEF16 | |||
}} |
Latest revision as of 17:20, 17 September 2015
Short description: | p15@ARHGEF16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ARHGEF16_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000445297_5end |
EntrezGene: | ARHGEF16 |
HGNC: | 15515 |
UniProt: | B0QZD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.00e-18 | 3 |
branched duct epithelial cell | 8.00e-18 | 3 |
tracheal epithelial cell | 8.00e-18 | 3 |
tracheoblast | 8.00e-18 | 3 |
gingival epithelial cell | 9.46e-18 | 3 |
brush border epithelial cell | 1.12e-17 | 3 |
kidney cortex tubule cell | 1.12e-17 | 3 |
epithelial cell of proximal tubule | 1.12e-17 | 3 |
epithelial cell of tracheobronchial tree | 7.91e-07 | 9 |
epithelial cell of lower respiratory tract | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.46e-18 | 3 |
renal cortex tubule | 1.12e-17 | 3 |
region of nephron tubule | 1.12e-17 | 3 |
proximal tubule | 1.12e-17 | 3 |
trachea | 2.03e-08 | 7 |
respiratory airway | 2.03e-08 | 7 |
epithelium of mucosa | 1.69e-07 | 8 |
gingiva | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |