FFCP PHASE1:Hg19::chr20:1305835..1305872,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:1305835..1305872,- | |||
|coexpression_cluster_id=C616 | |||
|description=CAGE_peak_at_chr20:1305835..1305872,- | |||
|id=chr20:1305835..1305872,- | |||
|ontology_enrichment_celltype=CL:0002057!9.34e-33!42;CL:0000860!2.15e-29!45;CL:0000738!5.15e-25!140;CL:0000766!2.11e-24!76;CL:0000557!3.32e-20!71;CL:0002087!6.68e-20!119;CL:0000037!8.22e-20!172;CL:0000566!8.22e-20!172;CL:0002031!5.77e-19!124;CL:0002009!1.20e-18!65;CL:0002194!1.38e-18!63;CL:0000576!1.38e-18!63;CL:0000040!1.38e-18!63;CL:0000559!1.38e-18!63;CL:0000839!2.01e-18!70;CL:0000988!2.13e-18!182;CL:0002032!4.75e-17!165;CL:0000837!4.75e-17!165;CL:0000763!4.49e-15!112;CL:0000049!4.49e-15!112;CL:0002320!2.29e-10!365;CL:0000134!8.02e-10!358;CL:0000219!2.98e-07!390;CL:0000048!4.86e-07!430;CL:0000034!7.48e-07!444;CL:0000094!7.61e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-63;33!CL:0002057;1.08e-63;33!CL:0000473;1.93e-43;39!CL:0000234;1.93e-43;39!CL:0000576;1.45e-34;48!CL:0000766;2.07e-24;69!CL:0002087;3.49e-17;104!CL:0000763;6.38e-13;100!CL:0000094;1.34e-12;8!CL:0000738;9.11e-12;136!CL:0000624;7.78e-11;6!CL:0000767;9.34e-10;3!CL:0000623;1.24e-09;3!CL:0000081;6.19e-09;11!CL:0000791;2.32e-08;18!CL:0000789;2.32e-08;18!CL:0002419;2.32e-08;18!CL:0000988;8.30e-08;177!CL:0000771;7.26e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.36e-64,42;CL:0002057,1.36e-64,42;CL:0000473,2.71e-55,48;CL:0000234,2.71e-55,48;CL:0000766,5.08e-54,72;CL:0000738,2.50e-52,136;CL:0002087,3.92e-45,115;CL:0000557,2.37e-43,67;CL:0000037,4.29e-43,168;CL:0002031,1.28e-42,120;CL:0002194,2.72e-42,59;CL:0000576,2.72e-42,59;CL:0000040,2.72e-42,59;CL:0000559,2.72e-42,59;CL:0000839,1.19e-41,66;CL:0002009,1.29e-40,61;CL:0002032,3.13e-40,161;CL:0000837,3.13e-40,161;CL:0000988,3.66e-40,177;CL:0000763,4.02e-34,108;CL:0000049,4.02e-34,108;CL:0000134,1.74e-17,354;CL:0002320,7.56e-17,361;CL:0000219,1.32e-14,386;CL:0000034,4.18e-13,441;CL:0000094,1.37e-12,8;CL:0000048,1.46e-12,427;CL:0000723,3.56e-12,433;CL:0000624,6.42e-11,6;CL:0000767,9.89e-10,3;CL:0000623,1.24e-09,3;CL:0000825,1.24e-09,3;CL:0000081,6.29e-09,11;CL:0000791,2.04e-08,18;CL:0000789,2.04e-08,18;CL:0002420,2.04e-08,18;CL:0002419,2.04e-08,18;CL:0000790,2.04e-08,18;CL:0000838,5.98e-07,52;CL:0000771,7.47e-07,2;CL:0000542,9.23e-07,53;CL:0000051,9.23e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;7.79e-48;42!CL:0000049;6.97e-10;108!CL:0000790;2.32e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.11e-20!80;UBERON:0002193!1.08e-18!112;UBERON:0002390!1.77e-18!102;UBERON:0003061!1.77e-18!102;UBERON:0001474!2.30e-18!86;UBERON:0002405!7.89e-15!115;UBERON:0004765!3.61e-14!101;UBERON:0001434!3.61e-14!101;UBERON:0002384!3.28e-10!375;UBERON:0003081!3.31e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.45e-42,76;UBERON:0001474,5.35e-38,82;UBERON:0002405,2.62e-36,93;UBERON:0002390,7.33e-36,98;UBERON:0003061,7.33e-36,98;UBERON:0004765,1.03e-33,90;UBERON:0002193,2.64e-33,108;UBERON:0001434,2.53e-29,100;UBERON:0003081,3.82e-17,203;UBERON:0002384,5.59e-16,371;UBERON:0002204,1.45e-13,167;UBERON:0000926,1.36e-07,315;UBERON:0004120,1.36e-07,315;UBERON:0006603,1.36e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,35.7961491932503,21.4944462934439,12.0756576186539,0,0,0.369754010166788,0.0774672005803016,0,7.04641054403633,3.32397245119126,3.81034450193269,6.72733699219141,0,0,0,1.59938062657521,3.02300754951048,3.88134497900506,3.48643555358527,7.81218987241469,13.0076675775944,13.8092348314632,17.1627673374497,36.4182634028421,8.27389633767885,13.5551783552603,21.6682378550947,5.08254316765033,2.72906150057846,11.4608977066993,13.7737751566906,13.4790191371959,28.1308335351578,3.62836430205388,6.58230070151385,10.6556187633174,12.4789972610291,15.8867862913519,14.9477339758938,15.8286659111748,18.251902144707,39.9627474257415,9.08099253950053,12.1531619875896,18.3548184715713,0,0,0.628975936525128,0.561643155732475,0.600707571366025,0.803627933485401,0.570025487482497,0,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.1384259382189,2.93618594685469,3.44045905312706,10.5737062863221,1.68152568894461,0.790152254325231,4.13090517239049,6.28817220398664,6.99045096598331,0,1.95553359980154,0.473447805734733,0,0.668462741311041,0.589211814949674,0.443067789167242,0.270803863765016,0.384273959177026,0.130059347559878,0,0,0,3.85545064221357,2.1403266247177,0,0,6.89796888483458,7.55980380061786,4.30133476433155,0,0,0,0,0,0,0,0.821127996921047,13.9108652825065,11.2324882229073,12.3100743300379,0,0,0,0,0,0,0,0.973269740605272,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0.371457501329565,2.58391129576717,0.860234595106124,0,1.69592382577203,0.419499436209906,0.275118041940067,1.8809546988313,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,0,1.89853131913626,0.366403487860815,10.5424333948851,19.3890132074163,0,0,0,0.794455084879313,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.717558542755448,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0,0.757301322732344,0,0,1.42003837006646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,1.85194205030644,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.864719720501769,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,13.7921532141349,15.3095578150257,16.0428795349685,0,0,0,0.167516265334349,0,2.99602809578873,0,0.828831026872071,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.82707210449155,4.31428401637234,1.06727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.340906509664404,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.432807638929335,0.0711418433484141,0,0,0.766021480529467,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.333698283423817,0.19538809540204,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0.964771509003264,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0.247127877893006,0,0.269604531922708,0,0,0,0,0.485560759068186,0,0,0,0.126373159256976,0.450970258243478,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0,0,0.273810757783986,1.27746588066972,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0.415440338029185,0,0.77380195455795,0.485996453264197,0,0,0,0,0.537862017998534,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0.511164065356265,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0.5013797880454,0.919036730290385,1.31149052283922,0,0,0,0.625954653532499,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,0,0.757612021100357,0.754703705257725,1.77962244319307,1.14420034198462,0.604923695052956,0.310874401165561,0.443565449968902,0.796483835818512,0.899606224327209,0.931577741257556,1.24411862352257,0.53168342911599,0.521745061811734,0.150257608997218,0,0.406870733204662,0.909243296012797,0.214821114084977,0.928067519756987,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.256916900385838,0,0,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,1.03343398250592,0.126831620387814,0,0,0,0.351742488719241,0,0,0,0,0.227662191351298,0,0,0,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.219881033490858,0,0.0771741581079447,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.909344378618873,0.267964130156178,0,0.517164979309476,0.213233981900981,0,0,0.620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:1305835..1305872,- | |||
}} |
Latest revision as of 11:57, 28 July 2015
Short description: | p@chr20:1305835..1305872, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:1305835..1305872, - |
Coexpression cluster: | C616_CD14_Natural_CD8_Basophils_Mast_Eosinophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.45e-42 | 76 |
bone element | 5.35e-38 | 82 |
immune system | 2.62e-36 | 93 |
hematopoietic system | 7.33e-36 | 98 |
blood island | 7.33e-36 | 98 |
skeletal element | 1.03e-33 | 90 |
hemolymphoid system | 2.64e-33 | 108 |
skeletal system | 2.53e-29 | 100 |
lateral plate mesoderm | 3.82e-17 | 203 |
connective tissue | 5.59e-16 | 371 |
musculoskeletal system | 1.45e-13 | 167 |
mesoderm | 1.36e-07 | 315 |
mesoderm-derived structure | 1.36e-07 | 315 |
presumptive mesoderm | 1.36e-07 | 315 |