FFCP PHASE1:Hg19::chr20:18038486..18038520,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15804 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BRP0 | |||
|association_with_transcript=0bp_to_ENST00000278780,NM_021220,uc002wqi.1_5end | |||
|cluster_id=chr20:18038486..18038520,- | |||
|description=CAGE_peak_2_at_OVOL2_5end | |||
|id=chr20:18038486..18038520,- | |||
|ontology_enrichment_celltype=CL:0002076!4.90e-25!43;CL:0000066!3.64e-22!254;CL:0000223!1.21e-17!59;CL:0002368!9.41e-13!13;CL:0002251!9.66e-11!21;CL:0002202!1.25e-08!9;CL:0002632!1.25e-08!9;CL:0000039!8.27e-08!7;CL:0000586!8.27e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.29e-16;42!CL:0002368;6.20e-14;13!CL:0000349;1.75e-09;19!CL:0002202;1.94e-09;9!CL:0002632;1.94e-09;9!CL:0002577;6.96e-09;3!CL:0002541;2.07e-08;3!CL:0002231;4.97e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.64e-22,42;CL:0000223,8.79e-18,58;CL:0000066,3.83e-17,253;CL:0002368,4.01e-14,13;CL:0000349,1.42e-09,19;CL:0002202,1.63e-09,9;CL:0002632,1.63e-09,9;CL:0002577,7.49e-09,3;CL:0002541,2.52e-08,3;CL:0002231,5.66e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.77e-11;58 | |||
|ontology_enrichment_disease=DOID:305!2.20e-18!106;DOID:1749!6.57e-14!14;DOID:0050687!1.41e-13!143;DOID:299!1.07e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:299;9.54e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.18e-11,25;DOID:305,2.80e-10,106;DOID:0050687,1.31e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.31e-22!169;UBERON:0000925!8.31e-22!169;UBERON:0006595!8.31e-22!169;UBERON:0001007!8.84e-16!155;UBERON:0001555!8.84e-16!155;UBERON:0007026!8.84e-16!155;UBERON:0001004!1.62e-15!72;UBERON:0000077!2.95e-14!130;UBERON:0004921!2.47e-13!129;UBERON:0004185!2.47e-13!129;UBERON:0005156!4.54e-12!59;UBERON:0000990!4.54e-12!59;UBERON:0005153!6.98e-12!37;UBERON:0005631!7.18e-12!14;UBERON:0000158!7.18e-12!14;UBERON:0000161!2.66e-11!35;UBERON:0000065!1.29e-10!53;UBERON:0005178!2.96e-10!34;UBERON:0002224!2.96e-10!34;UBERON:0000464!3.86e-10!104;UBERON:0003133!4.93e-10!48;UBERON:0005181!8.72e-10!35;UBERON:0004175!1.20e-09!25;UBERON:0005911!1.44e-09!82;UBERON:0003124!2.80e-09!7;UBERON:0000166!8.18e-09!21;UBERON:0003101!9.20e-09!22;UBERON:0000079!9.20e-09!22;UBERON:0005157!1.27e-08!51;UBERON:0001041!3.30e-08!98;UBERON:0000466!3.97e-08!126;UBERON:0000344!4.71e-08!12;UBERON:0000915!6.58e-08!52;UBERON:0007196!1.18e-07!14;UBERON:0001558!1.18e-07!14;UBERON:0003100!1.22e-07!41;UBERON:0004807!1.58e-07!28;UBERON:0000995!1.71e-07!21;UBERON:0000072!2.25e-07!46;UBERON:0003135!2.27e-07!11;UBERON:0002048!3.15e-07!22;UBERON:0000117!3.15e-07!22;UBERON:0000171!3.15e-07!22;UBERON:0000170!3.15e-07!22;UBERON:0005597!3.15e-07!22;UBERON:0000118!3.15e-07!22;UBERON:0005795!5.42e-07!22;UBERON:0003975!5.42e-07!22;UBERON:0000062!7.98e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000058;1.48e-11;10!UBERON:0005631;1.09e-08;10!UBERON:0000158;1.09e-08;10!UBERON:0002294;1.53e-08;7!UBERON:0001173;1.53e-08;7!UBERON:0006947;1.68e-08;3!UBERON:0004054;1.68e-08;3!UBERON:0003124;2.07e-08;3!UBERON:0000920;2.07e-08;3!UBERON:0000478;4.02e-07;24!UBERON:0007196;4.46e-07;15!UBERON:0001558;4.46e-07;15!UBERON:0001987;9.95e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.11e-15,160;UBERON:0000925,3.11e-15,160;UBERON:0006595,3.11e-15,160;UBERON:0005631,1.09e-13,14;UBERON:0000158,1.09e-13,14;UBERON:0003124,3.78e-13,7;UBERON:0004175,3.90e-10,25;UBERON:0001007,7.45e-10,145;UBERON:0001555,7.45e-10,145;UBERON:0007026,7.45e-10,145;UBERON:0005156,5.64e-09,59;UBERON:0000990,5.64e-09,59;UBERON:0006947,2.23e-08,3;UBERON:0004054,2.23e-08,3;UBERON:0004921,2.27e-08,118;UBERON:0000920,2.52e-08,3;UBERON:0000478,3.44e-07,24;UBERON:0000058,3.89e-07,19;UBERON:0007196,4.14e-07,15;UBERON:0001558,4.14e-07,15;UBERON:0003133,6.68e-07,48;UBERON:0001004,7.58e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,3.48900583986214,3.71350332621293,2.63766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,2.75826367343678,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0.272746120590835,0.286804595389004,0.121973706129595,0.397589304964456,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.548751427043128,3.37205259772859,1.10581869652794,0.740707561268237,0,0,0,0,0,0,0,0,0.790204397959275,3.43394464837949,0,0,0,0,0,0.283550194484773,0.53735113621709,1.45316969256981,0.766765358330422,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,3.94065842880137,3.32870879020994,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,1.40354529212299,5.34069735828199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,1.81813406897076,2.49847087574638,0.510450849978337,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,2.68120910214315,2.17781969722645,0.376575203107117,1.29151611801369,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,2.61996756571508,0,0,0,0,1.90995587790152,0.593929361665277,0.921482106297696,0,0,0,0,0.211125408127993,0.398495976502139,1.38141957765574,0.503865495708552,0,0,0,1.16828856491525,3.40140231883657,0,0.394573622547734,0,0,0,0,0,3.38556089410803,0.787139999965761,0,0.227586896570999,2.2882828526349,0.236387681767936,1.03423011972439,0,0,0,0,0,0,0,0,0,2.37020365273626,1.15425387755696,0,2.53620294826866,1.07709173291727,1.4124158349861,2.55200927785536,1.09917112082235,6.39641731222362,0,0,0,0,0,0,0,0,0,0.489698424477443,0.424059214301822,0,0.995261931078505,1.94606641907346,2.4441205797345,0,0,0,0.067401132980677,0,0,0,2.15231080825299,0,3.55125962564451,0,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0.569219092059585,0,4.33899345837827,0.979923974143776,0.957651272384428,1.04836000945218,0,0,0,0,1.06687918137261,0,0,0,0,0,2.54216797555244,0.320635281006135,1.92107695265417,0,2.59362750877391,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.687697182986169,0.415440338029185,0,1.5476039091159,0.121499113316049,4.36065093879046,0.394028536495991,0.367182116944987,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0.471612915298998,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,2.93746966210833,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,1.07962490351128,0.589848616738702,2.01771458373847,1.15525666150338,0,0,0,0.0752103283492573,0,0,1.04762677792569,0,1.03499260351932,0,0,0,0,0,1.64477330057155,0.992422356778588,0,1.02209942111676,0,0,0,0.682986574053893,0.0887023701626388,0,0,0,0.131545547125698,0.118193840883968,0.444925607568277,1.25588948560822,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0.860454717640555,0,0,3.81048345171836,2.52017555398455,0,0,1.00669888618013,2.25745537315059,1.5849330247695,0,0,0,0.485710993059139,1.87151570769685,0.994753875806841,0,1.58124514854544,0.109940516745429,0.905777061400041,0.848915739187391,0,0.470317296361523,0.245148321753905,0.471353094203252,0,0,0,0,0,0,0,1.96409332466223,1.05868461514708,0.882655033580851,3.65168194123259,0.917458566809082,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0,0,0,0.61193297845189,0.26721740526556,2.11358268930143,0.250707539292375,0.151557396436479,0,0,0,0.213233981900981,0.476128862927481,0.0645889098360061,0.0620747142958579,0,1.33659032384146,0,1.30630048738177,0.342233301085281,0.5388164241167,1.2192774916755,0.99798106963804,0.651226148887796,0,0,0,0,0.488965776731466,0,0,0,0 | |||
|short_description=p2@OVOL2 | |||
}} |
Latest revision as of 07:03, 20 September 2015
Short description: | p2@OVOL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OVOL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000278780, NM_021220, uc002wqi.1_5end |
EntrezGene: | OVOL2 |
HGNC: | 15804 |
UniProt: | Q9BRP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.64e-22 | 42 |
endodermal cell | 8.79e-18 | 58 |
epithelial cell | 3.83e-17 | 253 |
respiratory epithelial cell | 4.01e-14 | 13 |
extraembryonic cell | 1.42e-09 | 19 |
epithelial cell of tracheobronchial tree | 1.63e-09 | 9 |
epithelial cell of lower respiratory tract | 1.63e-09 | 9 |
placental epithelial cell | 7.49e-09 | 3 |
chorionic membrane mesenchymal stem cell | 2.52e-08 | 3 |
epithelial cell of prostate | 5.66e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.11e-15 | 160 |
endoderm | 3.11e-15 | 160 |
presumptive endoderm | 3.11e-15 | 160 |
extraembryonic membrane | 1.09e-13 | 14 |
membranous layer | 1.09e-13 | 14 |
chorion | 3.78e-13 | 7 |
internal genitalia | 3.90e-10 | 25 |
digestive system | 7.45e-10 | 145 |
digestive tract | 7.45e-10 | 145 |
primitive gut | 7.45e-10 | 145 |
reproductive structure | 5.64e-09 | 59 |
reproductive system | 5.64e-09 | 59 |
male genital duct | 2.23e-08 | 3 |
internal male genitalia | 2.23e-08 | 3 |
subdivision of digestive tract | 2.27e-08 | 118 |
egg chorion | 2.52e-08 | 3 |
extraembryonic structure | 3.44e-07 | 24 |
duct | 3.89e-07 | 19 |
tracheobronchial tree | 4.14e-07 | 15 |
lower respiratory tract | 4.14e-07 | 15 |
reproductive organ | 6.68e-07 | 48 |
respiratory system | 7.58e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.18e-11 | 25 |
carcinoma | 2.80e-10 | 106 |
cell type cancer | 1.31e-08 | 143 |