FFCP PHASE1:Hg19::chr20:47538357..47538362,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10564 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15853 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6D5 | |||
|association_with_transcript=-64bp_to_ENST00000371917_5end | |||
|cluster_id=chr20:47538357..47538362,+ | |||
|description=CAGE_peak_5_at_ARFGEF2_5end | |||
|id=chr20:47538357..47538362,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.28e-12!45;CL:0002057!2.27e-11!42;CL:0000839!2.80e-08!70;CL:0000557!6.39e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-12;33!CL:0002057;1.11e-12;33!CL:0000097;1.65e-09;5!CL:0000473;2.05e-09;39!CL:0000234;2.05e-09;39!CL:0000576;7.40e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.70e-11,42;CL:0002057,1.70e-11,42;CL:0000839,1.85e-11,66;CL:0000557,2.83e-11,67;CL:0000766,2.01e-10,72;CL:0000473,5.63e-10,48;CL:0000234,5.63e-10,48;CL:0000097,2.17e-09,5;CL:0002028,2.17e-09,5;CL:0002194,7.61e-08,59;CL:0000576,7.61e-08,59;CL:0000040,7.61e-08,59;CL:0000559,7.61e-08,59;CL:0002009,1.43e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;7.74e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.05e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!9.79e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;7.74e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,8.17e-15,90;UBERON:0001474,1.19e-13,82;UBERON:0001434,3.57e-13,100;UBERON:0002371,3.61e-12,76;UBERON:0002405,8.02e-12,93;UBERON:0007195,8.64e-12,1;UBERON:0002193,5.62e-10,108;UBERON:0002390,3.71e-09,98;UBERON:0003061,3.71e-09,98;UBERON:0002204,1.33e-08,167 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,0,0.601633342410425,0.217010870715852,0,0,0,0.581592955118259,0.755751887377619,0.727752183563449,0.697287110717054,0,0.309706370895104,0,0,0,0.689491361473237,1.29096936716765,1.35426486594342,0.376484679085209,1.09162460023138,0,0.306083892370903,0.962787081228281,0.639337125799041,0.989553900560148,0.598390972864896,0,0.580418477257168,1.70215567407342,0.622822248995575,1.00499466102697,1.0429658368404,0.434377689410233,0,1.10483290796269,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0.336985893439485,0.450530678524519,0,0.570025487482497,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0.50133791063589,0,0.795285947051099,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.649094787309367,0.348259474598534,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,0.208994966536811,0.516833518338658,1.06729878806013,0,0,0.760272105718513,0.24406205754817,1.47065232138347,0,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0.148631162288728,1.87467667973554,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,2.95597942737566,0.264145302039678,1.03664057770386,0.576479813667846,0.50496973370552,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0.496215615637554,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0.842516912477962,0,0,0,0.409499734223957,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.743212700502875,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0.37428108081644,0,0,0.111443384277478,0,0,0.296964680832639,0,0.994147647766298,0,0.333926115068718,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0.449341755736634,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,2.3438498497671,0.174919999992391,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0,0.32681539055697,0,0.0769502585037971,0,0,0.0897576444097721,0.217294743844016,0,0.274792780205587,0.533034776018635,0,0.156980256395025,0.332423363800313,0.225595660617181,0.19606253431774,0.167821586975843,0.37950746544837,0.794682894901893,0,0.326465616318295,0.706765357169704,0,0,0.619202951523374,0,0.296521128680622,0.123563938946503,0.208843899010911,0.202203398942031,0,0,0,0.782658475728359,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0.450970258243478,0.207376382794494,0,0,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0,0.957651272384428,0,0,0.0967563312890851,0.511625219603299,0.0821154570532092,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| |||
|short_description=p5@ARFGEF2 | |||
}} |
Latest revision as of 18:12, 16 September 2015
Short description: | p5@ARFGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARFGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000371917_5end |
EntrezGene: | ARFGEF2 |
HGNC: | 15853 |
UniProt: | Q9Y6D5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.70e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.70e-11 | 42 |
myeloid lineage restricted progenitor cell | 1.85e-11 | 66 |
granulocyte monocyte progenitor cell | 2.83e-11 | 67 |
myeloid leukocyte | 2.01e-10 | 72 |
defensive cell | 5.63e-10 | 48 |
phagocyte | 5.63e-10 | 48 |
mast cell | 2.17e-09 | 5 |
basophil mast progenitor cell | 2.17e-09 | 5 |
monopoietic cell | 7.61e-08 | 59 |
monocyte | 7.61e-08 | 59 |
monoblast | 7.61e-08 | 59 |
promonocyte | 7.61e-08 | 59 |
macrophage dendritic cell progenitor | 1.43e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 8.17e-15 | 90 |
bone element | 1.19e-13 | 82 |
skeletal system | 3.57e-13 | 100 |
bone marrow | 3.61e-12 | 76 |
immune system | 8.02e-12 | 93 |
stroma of bone marrow | 8.64e-12 | 1 |
hemolymphoid system | 5.62e-10 | 108 |
hematopoietic system | 3.71e-09 | 98 |
blood island | 3.71e-09 | 98 |
musculoskeletal system | 1.33e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.05e-12 | 1 |