FFCP PHASE1:Hg19::chr21:34697353..34697368,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5432 | |||
|TSSclassifier=strong | |||
|UniProt=C9J114,C9JV08 | |||
|association_with_transcript=75bp_to_ENST00000442071,ENST00000442357_5end | |||
|cluster_id=chr21:34697353..34697368,+ | |||
|description=CAGE_peak_2_at_IFNAR1_5end | |||
|id=chr21:34697353..34697368,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.75e-21!140;CL:0002087!4.93e-18!119;CL:0002031!3.55e-17!124;CL:0000037!1.31e-15!172;CL:0000566!1.31e-15!172;CL:0000766!1.70e-15!76;CL:0002009!8.38e-15!65;CL:0000988!1.31e-14!182;CL:0002194!1.62e-14!63;CL:0000576!1.62e-14!63;CL:0000040!1.62e-14!63;CL:0000559!1.62e-14!63;CL:0002032!5.34e-14!165;CL:0000837!5.34e-14!165;CL:0000839!1.08e-13!70;CL:0000557!1.17e-13!71;CL:0002057!3.01e-13!42;CL:0000860!9.76e-12!45;CL:0000219!1.31e-09!390;CL:0000763!1.39e-09!112;CL:0000049!1.39e-09!112;CL:0000134!9.84e-08!358;CL:0002320!2.15e-07!365;CL:0000236!4.38e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.66e-13;39!CL:0000234;5.66e-13;39!CL:0000860;1.87e-11;33!CL:0002057;1.87e-11;33!CL:0000576;4.72e-10;48!CL:0000236;7.61e-10;13!CL:0000766;8.21e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.53e-24,136;CL:0002087,5.31e-22,115;CL:0000766,6.17e-20,72;CL:0000473,6.57e-20,48;CL:0000234,6.57e-20,48;CL:0002194,2.02e-19,59;CL:0000576,2.02e-19,59;CL:0000040,2.02e-19,59;CL:0000559,2.02e-19,59;CL:0002009,2.60e-19,61;CL:0002031,3.17e-19,120;CL:0000037,4.12e-18,168;CL:0000988,2.79e-17,177;CL:0000557,5.39e-17,67;CL:0000839,1.64e-16,66;CL:0002032,4.39e-16,161;CL:0000837,4.39e-16,161;CL:0000860,1.25e-15,42;CL:0002057,1.25e-15,42;CL:0000763,1.68e-11,108;CL:0000049,1.68e-11,108;CL:0000236,1.71e-08,14;CL:0000219,1.50e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.04e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-12!102;UBERON:0003061!1.71e-12!102;UBERON:0002193!1.67e-11!112;UBERON:0002371!1.35e-10!80;UBERON:0002405!2.76e-10!115;UBERON:0001474!2.79e-10!86;UBERON:0004765!2.92e-09!101;UBERON:0001434!2.92e-09!101;UBERON:0001017!4.87e-08!82;UBERON:0000073!6.37e-08!94;UBERON:0001016!6.37e-08!94;UBERON:0005743!1.69e-07!86;UBERON:0002384!2.81e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.08e-17,98;UBERON:0003061,8.08e-17,98;UBERON:0002193,1.68e-15,108;UBERON:0002405,1.40e-14,93;UBERON:0002371,2.20e-14,76;UBERON:0001474,2.82e-13,82;UBERON:0004765,8.06e-12,90;UBERON:0001434,1.37e-10,100 | |||
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| |||
|short_description=p2@IFNAR1 | |||
}} |
Latest revision as of 04:07, 18 September 2015
Short description: | p2@IFNAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFNAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 75bp_to_ENST00000442071, ENST00000442357_5end |
EntrezGene: | IFNAR1 |
HGNC: | 5432 |
UniProt: | C9J114C9JV08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.53e-24 | 136 |
nongranular leukocyte | 5.31e-22 | 115 |
myeloid leukocyte | 6.17e-20 | 72 |
defensive cell | 6.57e-20 | 48 |
phagocyte | 6.57e-20 | 48 |
monopoietic cell | 2.02e-19 | 59 |
monocyte | 2.02e-19 | 59 |
monoblast | 2.02e-19 | 59 |
promonocyte | 2.02e-19 | 59 |
macrophage dendritic cell progenitor | 2.60e-19 | 61 |
hematopoietic lineage restricted progenitor cell | 3.17e-19 | 120 |
hematopoietic stem cell | 4.12e-18 | 168 |
hematopoietic cell | 2.79e-17 | 177 |
granulocyte monocyte progenitor cell | 5.39e-17 | 67 |
myeloid lineage restricted progenitor cell | 1.64e-16 | 66 |
hematopoietic oligopotent progenitor cell | 4.39e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.39e-16 | 161 |
classical monocyte | 1.25e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-15 | 42 |
myeloid cell | 1.68e-11 | 108 |
common myeloid progenitor | 1.68e-11 | 108 |
B cell | 1.71e-08 | 14 |
motile cell | 1.50e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.08e-17 | 98 |
blood island | 8.08e-17 | 98 |
hemolymphoid system | 1.68e-15 | 108 |
immune system | 1.40e-14 | 93 |
bone marrow | 2.20e-14 | 76 |
bone element | 2.82e-13 | 82 |
skeletal element | 8.06e-12 | 90 |
skeletal system | 1.37e-10 | 100 |