FFCP PHASE1:Hg19::chr21:46340976..46341000,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000441379,uc002zgh.2_5end | |||
|cluster_id=chr21:46340976..46341000,+ | |||
|coexpression_cluster_id=C1627 | |||
|description=CAGE_peak_1_at_ENST00000441379_5end,CAGE_peak_1_at_uc002zgh.2_5end | |||
|id=chr21:46340976..46341000,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.22e-73!140;CL:0002087!2.10e-68!119;CL:0000037!2.24e-65!172;CL:0000566!2.24e-65!172;CL:0002031!2.00e-61!124;CL:0002032!5.69e-61!165;CL:0000837!5.69e-61!165;CL:0000988!2.29e-59!182;CL:0002057!1.29e-38!42;CL:0000766!2.32e-36!76;CL:0000860!7.11e-35!45;CL:0002194!1.72e-32!63;CL:0000576!1.72e-32!63;CL:0000040!1.72e-32!63;CL:0000559!1.72e-32!63;CL:0002009!2.97e-32!65;CL:0000838!2.22e-31!52;CL:0000542!1.87e-30!53;CL:0000051!1.87e-30!53;CL:0000763!5.44e-29!112;CL:0000049!5.44e-29!112;CL:0000839!1.95e-28!70;CL:0000557!6.94e-28!71;CL:0000791!1.18e-17!18;CL:0000789!1.18e-17!18;CL:0002420!1.18e-17!18;CL:0002419!1.18e-17!18;CL:0000790!1.18e-17!18;CL:0000084!4.10e-16!25;CL:0000827!4.10e-16!25;CL:0000945!4.39e-14!24;CL:0000826!4.39e-14!24;CL:0000625!3.54e-12!11;CL:0000134!8.29e-12!358;CL:0002393!4.88e-11!9;CL:0002397!4.88e-11!9;CL:0002320!5.96e-11!365;CL:0000236!5.78e-10!14;CL:0000094!8.09e-10!8;CL:0000219!1.62e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.51e-35;33!CL:0002057;2.51e-35;33!CL:0000473;6.30e-31;39!CL:0000234;6.30e-31;39!CL:0000576;3.04e-27;48!CL:0000791;1.58e-23;18!CL:0000789;1.58e-23;18!CL:0002419;1.58e-23;18!CL:0002087;1.47e-22;104!CL:0000766;4.67e-22;69!CL:0000738;1.58e-18;136!CL:0000542;8.02e-18;53!CL:0000084;4.71e-17;25!CL:0000625;4.37e-16;11!CL:0000945;2.50e-13;24!CL:0000094;9.00e-13;8!CL:0000236;1.14e-12;13!CL:0000988;1.06e-11;177!CL:0000763;5.25e-10;100!CL:0002393;7.15e-10;6!CL:0002397;7.15e-10;6!CL:0000219;5.92e-09;193!CL:0000081;9.78e-09;11!CL:0000624;3.07e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.56e-90,136;CL:0002087,4.61e-85,115;CL:0002031,2.28e-75,120;CL:0000037,2.69e-72,168;CL:0002032,6.38e-68,161;CL:0000837,6.38e-68,161;CL:0000988,4.86e-67,177;CL:0000473,6.05e-53,48;CL:0000234,6.05e-53,48;CL:0000766,8.75e-53,72;CL:0000860,2.80e-52,42;CL:0002057,2.80e-52,42;CL:0002194,8.12e-47,59;CL:0000576,8.12e-47,59;CL:0000040,8.12e-47,59;CL:0000559,8.12e-47,59;CL:0002009,1.47e-46,61;CL:0000557,6.16e-41,67;CL:0000839,3.69e-40,66;CL:0000763,5.33e-34,108;CL:0000049,5.33e-34,108;CL:0000838,4.25e-32,52;CL:0000542,3.03e-31,53;CL:0000051,3.03e-31,53;CL:0000791,1.49e-23,18;CL:0000789,1.49e-23,18;CL:0002420,1.49e-23,18;CL:0002419,1.49e-23,18;CL:0000790,1.49e-23,18;CL:0000134,1.73e-18,354;CL:0002320,1.40e-17,361;CL:0000084,5.00e-17,25;CL:0000827,5.00e-17,25;CL:0000625,4.66e-16,11;CL:0000219,4.05e-15,386;CL:0002393,1.67e-14,9;CL:0002397,1.67e-14,9;CL:0000236,2.02e-13,14;CL:0000945,2.78e-13,24;CL:0000826,2.78e-13,24;CL:0000094,7.74e-13,8;CL:0000048,1.16e-10,427;CL:0000034,2.25e-10,441;CL:0000723,3.73e-10,433;CL:0000081,8.82e-09,11;CL:0000624,2.70e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-37;42!CL:0000790;1.58e-23;18!CL:0000051;8.02e-18;53!CL:0000049;8.24e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-35!102;UBERON:0003061!1.31e-35!102;UBERON:0002193!2.03e-32!112;UBERON:0002371!1.15e-23!80;UBERON:0001474!1.04e-20!86;UBERON:0002405!7.89e-18!115;UBERON:0004765!1.17e-15!101;UBERON:0001434!1.17e-15!101;UBERON:0002384!3.56e-10!375;UBERON:0000178!9.78e-10!15;UBERON:0000179!9.78e-10!15;UBERON:0000463!9.78e-10!15;UBERON:0003081!1.81e-07!216;UBERON:0007023!5.04e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.93e-13;15!UBERON:0000179;2.93e-13;15!UBERON:0000463;2.93e-13;15!UBERON:0002390;8.36e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.24e-50,98;UBERON:0003061,5.24e-50,98;UBERON:0002193,1.94e-46,108;UBERON:0002405,1.76e-34,93;UBERON:0002371,3.51e-34,76;UBERON:0001474,1.63e-30,82;UBERON:0004765,2.10e-26,90;UBERON:0001434,3.19e-22,100;UBERON:0002384,2.38e-16,371;UBERON:0003081,5.46e-15,203;UBERON:0000178,2.81e-13,15;UBERON:0000179,2.81e-13,15;UBERON:0000463,2.81e-13,15;UBERON:0002204,8.00e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04328477936478,4.10502947249729,6.21815172378066,6.68719270643137,14.5855171276941,4.79929982279836,0,0,0,0.309868802321207,0.853015394924529,0.880801318004542,11.6339035791694,6.01633342410425,13.0206522429511,0,0,0.257575567634187,6.39752250630085,2.26725566213286,2.18325655069035,5.81072592264212,5.34518254428373,4.02618282163635,8.05538698502021,5.89169625016932,5.20260905754887,13.1003358679915,5.80936215225443,2.70852973188684,6.21199720490596,3.0019676506363,3.37085226667627,7.65209730927256,6.41858054152187,7.67204550958849,5.93732340336089,4.78712778291916,1.27867425159808,11.8985787837719,8.5107783703671,3.11411124497787,13.5674279238641,6.77927793946262,5.42972111762792,7.87019353423379,8.10210799172642,4.43047342417238,16.6891676186434,24.236890196015,13.4181533125361,13.1424498441399,17.4205195696147,13.1794981091606,23.3710449867824,31.2299183202571,22.46769091305,14.0796995569058,12.0150494477669,9.7846017924991,5.12076267079809,4.40435585739614,8.62128659931725,13.2208974556972,11.4486450544244,17.0763890732835,5.28513470433845,12.9972897562578,1.32171328579026,3.92355994087075,0.526768169550154,8.85193965512249,2.35806457649499,3.08402248499264,3.17654341242288,2.60737813306872,6.15482147455153,3.89653456815823,1.78256731016278,7.9543595018206,7.53215241584312,4.60366568400527,3.0741916734162,0.520237390239513,1.47994114143309,0.276350017785848,1.15921234294021,8.15576097391332,13.6445822325754,9.40819714244791,1.47302145506836,18.0113631992903,22.3357839563709,13.4100436770337,15.6097053018807,19.5325036156926,20.9099449778642,4.51725357233318,7.03926361349301,6.24653632761729,17.9950711553453,19.7070719261051,8.46748321543876,5.08136371988664,10.1377082717959,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,1.62273696827342,1.91542711029194,6.38198210490553,1.19245312152671,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1314542666882,27.1446184903828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,2.57404691653161,4.60756603095058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,2.35378802386407,6.10795356625974,2.15627574859517,5.39040752374943,0,0,0,0,0,19.4741826226267,53.8490626567245,14.9189584836973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03011288817817,16.3942792622149,7.57765660404455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,13.7010854492686,15.2927441428475,18.7983571767474,3.33524485640905,6.9931586424653,14.2664128462398,14.040817368191,11.8968776444141,0,0,0,0,0,0.924843963529383,0.159426272728822,0,0.766021480529467,0.423347165447766,0,0,5.02116293873023,0,2.50634477090067,0.338583555603207,0.1605880751037,0,0,2.06103206853459,0,0,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,5.8019622261541,0,0,0.492339221844278,0,0,0,0,0.394573622547734,14.3689855408164,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,2.04386596391473,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0,2.41981432097328,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0.201550417460179,0,0,0,0,0,0,1.69346664131569,0,0.136203406111576,0,0,0,1.1248694577575,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,1.57204305099666,1.24271716604159,2.48083010905975,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0.327130788511688,0,0,0,0.79994958341972,0.320075189082423,0,0,0,0,0,0,0,20.4445724412665,0,0,0,3.34626563499306,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0.351742488719241,0,0.535701835878287,0,0.606965604236632,0.682986574053893,0.177404740325278,1.72850981333669,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0,0,2.72553362141575,2.19156819110162,0,0,0,0,0.730336388246517,1.37618785021362,0.573358332605805,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0.476128862927481,0.710478008196067,2.73128742901775,0,0.0636471582781649,0,0.217716747896961,0,2.89613827962726,0.430333232356058,0,0,0,0,0,0,0,0,0.665756774185513,2.41528552309231,1.28227396921293 | |||
|short_description=p1@ENST00000441379,p1@uc002zgh.2 | |||
}} |
Latest revision as of 18:33, 28 July 2015
Short description: | p1@ENST00000441379, p1@uc002zgh.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000441379_5end, CAGE_peak_1_at_uc002zgh.2_5end |
Coexpression cluster: | C1627_Whole_Neutrophils_CD14CD16_CD14_blood_CD8_Eosinophils |
Association with transcript: | 10bp_to_ENST00000441379, uc002zgh.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.24e-50 | 98 |
blood island | 5.24e-50 | 98 |
hemolymphoid system | 1.94e-46 | 108 |
immune system | 1.76e-34 | 93 |
bone marrow | 3.51e-34 | 76 |
bone element | 1.63e-30 | 82 |
skeletal element | 2.10e-26 | 90 |
skeletal system | 3.19e-22 | 100 |
connective tissue | 2.38e-16 | 371 |
lateral plate mesoderm | 5.46e-15 | 203 |
blood | 2.81e-13 | 15 |
haemolymphatic fluid | 2.81e-13 | 15 |
organism substance | 2.81e-13 | 15 |
musculoskeletal system | 8.00e-08 | 167 |