FFCP PHASE1:Hg19::chr2:27876335..27876340,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:27876335..27876340,- | |||
|description=CAGE_peak_at_chr2:27876335..27876340,- | |||
|id=chr2:27876335..27876340,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000895;5.06e-13;1!CL:0000540;1.00e-08;6!CL:0000404;1.00e-08;6!CL:0002561;3.81e-07;2!CL:1000415;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,6.06e-13,1;CL:0000895,6.06e-13,1;CL:0002436,6.06e-13,1;CL:0002427,6.06e-13,1;CL:0002428,6.06e-13,1;CL:0002429,6.06e-13,1;CL:0002433,6.06e-13,1;CL:0002431,6.06e-13,1;CL:0002432,6.06e-13,1;CL:0000540,7.93e-09,6;CL:0000031,7.93e-09,6;CL:0000404,7.93e-09,6;CL:0002561,2.74e-07,2;CL:1000415,2.91e-07,2;CL:0000893,4.17e-07,2;CL:0002489,4.17e-07,2;CL:0000809,4.17e-07,2;CL:0000808,4.17e-07,2;CL:0000894,4.17e-07,2;CL:0000806,4.17e-07,2;CL:0000807,4.17e-07,2;CL:0000805,4.17e-07,2;CL:0002425,4.17e-07,2;CL:0000047,7.88e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002427;5.06e-13;1!UBERON:0003099;5.06e-13;1!UBERON:0003852;5.06e-13;1!CL:0000031;1.00e-08;6!CL:0002425;3.81e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;5.06e-13;1!UBERON:0008193;5.06e-13;1!UBERON:0010912;5.06e-13;1!UBERON:0002514;5.06e-13;1!UBERON:0003457;5.06e-13;1!UBERON:0008907;5.06e-13;1!UBERON:0008001;5.06e-13;1!UBERON:0007213;5.06e-13;1!UBERON:0009891;5.06e-13;1!UBERON:0007914;5.06e-13;1!UBERON:0007375;5.06e-13;1!UBERON:0003323;5.06e-13;1!UBERON:0010258;5.06e-13;1!UBERON:0005253;5.06e-13;1!UBERON:0007842;5.06e-13;1!UBERON:0002397;5.06e-13;1!UBERON:0003113;5.06e-13;1!UBERON:0003277;5.06e-13;1!UBERON:0001709;5.06e-13;1!UBERON:0002244;5.06e-13;1!UBERON:0005620;5.06e-13;1!UBERON:0010364;5.06e-13;1!UBERON:0004288;5.06e-13;1!UBERON:0002771;2.28e-07;2!UBERON:0001875;3.81e-07;2!UBERON:0005933;3.81e-07;2!UBERON:0005942;3.81e-07;2!UBERON:0004089;3.81e-07;2!UBERON:0006514;3.81e-07;2!UBERON:0005932;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,7.68e-13,1;UBERON:0008193,7.68e-13,1;UBERON:0010912,7.68e-13,1;UBERON:0002514,7.68e-13,1;UBERON:0003457,7.68e-13,1;UBERON:0008907,7.68e-13,1;UBERON:0008001,7.68e-13,1;UBERON:0007213,7.68e-13,1;UBERON:0009891,7.68e-13,1;UBERON:0007914,7.68e-13,1;UBERON:0009292,7.68e-13,1;UBERON:0003099,7.68e-13,1;UBERON:0007375,7.68e-13,1;UBERON:0003323,7.68e-13,1;UBERON:0010258,7.68e-13,1;UBERON:0007842,7.68e-13,1;UBERON:0009494,7.68e-13,1;UBERON:0010042,7.68e-13,1;UBERON:0010045,7.68e-13,1;UBERON:0010259,7.68e-13,1;UBERON:0010359,7.68e-13,1;UBERON:0009526,7.68e-13,1;UBERON:0002397,7.68e-13,1;UBERON:0003113,7.68e-13,1;UBERON:0003277,7.68e-13,1;UBERON:0001709,7.68e-13,1;UBERON:0004066,7.68e-13,1;UBERON:0002244,7.68e-13,1;UBERON:0005620,7.68e-13,1;UBERON:0004362,7.68e-13,1;UBERON:0010364,7.68e-13,1;UBERON:0010046,7.68e-13,1;UBERON:0005868,7.68e-13,1;UBERON:0007238,7.68e-13,1;UBERON:0004288,7.68e-13,1;UBERON:0004068,7.68e-13,1;UBERON:0010334,7.68e-13,1;UBERON:0003852,7.68e-13,1;UBERON:0010253,7.68e-13,1;UBERON:0002771,2.28e-07,2;UBERON:0005933,2.74e-07,2;UBERON:0005942,2.74e-07,2;UBERON:0005932,2.74e-07,2;UBERON:0001875,3.48e-07,2;UBERON:0006514,3.48e-07,2;UBERON:0005253,4.69e-07,2;UBERON:0004089,4.69e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,2.01697543935533,0.602694528023977,0,0.487932798790507,0,0,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,0.369754010166788,0.232401601740905,0.142169232487422,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0.768482119587302,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0.632924774881769,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.790152254325231,0,0,0,0.334372990781356,0.651844533267181,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,1.14966148080576,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,0,0.443458794925128,0.087834785693126,0,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,0,0.515262646192195,0.257640540045629,0,0,0,0.757301322732344,0.184099797284599,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,1.39310378409594,0,0.118306800039844,0.337169380156203,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.775630294546667,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0.271265023699736,0.831883446123229,0.892144943985809,0.473107245101804,0,0.300946099727719,0,0,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0,0.429680979473094,0,0.0852266274161009,0,0,0,0.127612712494584,0,0.464845549297286,0.62962469366128,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0.185803175125719,0.144269212976445,0.142283686696828,0,0.199579371432817,0.383010740264733,0.211673582723883,0.324621940274555,0,0.456469358066384,0,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0.20453736500431,0.246169610922139,0.311039587661807,0,0.537063524026827,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.227586896570999,0.254253650292766,0,0,1.16641845353302,0.520874984799877,0.885741385813839,0.361789315876224,0,0.110579259931225,0.591095237907095,0,0.10893846351899,0.278847488557207,0,0.227884111694002,0,0,0.217294743844016,0.31900115973192,0.183195186803725,0.533034776018635,1.02193298195737,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0.421996129056054,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0,0.067401132980677,0,0.468528891450678,0.547364367646998,0,0.485560759068186,0.394584402849391,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0.693373365065693,0.173559738335131,0,0,0,0.687944129886466,0.0967563312890851,0.0730893170861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| |||
|short_description=p@chr2:27876335..27876340,- | |||
}} |
Latest revision as of 09:15, 29 July 2015
Short description: | p@chr2:27876335..27876340, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:27876335..27876340, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 6.06e-13 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.06e-13 | 1 |
mature CD4 single-positive thymocyte | 6.06e-13 | 1 |
resting double-positive thymocyte | 6.06e-13 | 1 |
double-positive blast | 6.06e-13 | 1 |
CD69-positive double-positive thymocyte | 6.06e-13 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.06e-13 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.06e-13 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.06e-13 | 1 |
neuron | 7.93e-09 | 6 |
neuroblast | 7.93e-09 | 6 |
electrically signaling cell | 7.93e-09 | 6 |
outer root sheath cell | 2.74e-07 | 2 |
epithelial cell of gall bladder | 2.91e-07 | 2 |
thymocyte | 4.17e-07 | 2 |
double negative thymocyte | 4.17e-07 | 2 |
double-positive, alpha-beta thymocyte | 4.17e-07 | 2 |
DN4 thymocyte | 4.17e-07 | 2 |
DN1 thymic pro-T cell | 4.17e-07 | 2 |
DN2 thymocyte | 4.17e-07 | 2 |
DN3 thymocyte | 4.17e-07 | 2 |
immature single positive thymocyte | 4.17e-07 | 2 |
early T lineage precursor | 4.17e-07 | 2 |
neuronal stem cell | 7.88e-07 | 8 |