FFCP PHASE1:Hg19::chr2:33701352..33701361,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14545 | |||
|TSSclassifier=strong | |||
|UniProt=Q53SD7,Q8IV61 | |||
|association_with_transcript=31bp_to_NM_001139488,uc010ync.1_5end | |||
|cluster_id=chr2:33701352..33701361,+ | |||
|coexpression_cluster_id=C2698 | |||
|description=CAGE_peak_7_at_RASGRP3_5end | |||
|id=chr2:33701352..33701361,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.13e-33!119;CL:0002031!1.45e-30!124;CL:0000738!5.67e-30!140;CL:0002032!3.11e-26!165;CL:0000837!3.11e-26!165;CL:0000037!4.43e-26!172;CL:0000566!4.43e-26!172;CL:0000988!2.77e-25!182;CL:0000945!1.16e-18!24;CL:0000826!1.16e-18!24;CL:0000542!2.74e-18!53;CL:0000051!2.74e-18!53;CL:0000838!1.03e-17!52;CL:0002009!3.03e-15!65;CL:0002194!3.92e-15!63;CL:0000576!3.92e-15!63;CL:0000040!3.92e-15!63;CL:0000559!3.92e-15!63;CL:0002057!1.16e-13!42;CL:0000839!3.71e-13!70;CL:0000557!8.81e-13!71;CL:0000860!4.71e-12!45;CL:0000766!8.12e-12!76;CL:0000763!3.28e-10!112;CL:0000049!3.28e-10!112;CL:0000236!3.91e-10!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.87e-37;24!CL:0000236;6.82e-18;13!CL:0000542;4.93e-13;53!CL:0000473;5.25e-07;39!CL:0000234;5.25e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.74e-38,24;CL:0000826,8.74e-38,24;CL:0002087,2.60e-25,115;CL:0002031,7.17e-24,120;CL:0000738,1.93e-21,136;CL:0000838,1.09e-20,52;CL:0000236,2.02e-20,14;CL:0000542,3.41e-20,53;CL:0000051,3.41e-20,53;CL:0002032,7.10e-18,161;CL:0000837,7.10e-18,161;CL:0000037,9.88e-17,168;CL:0000988,2.14e-15,177;CL:0002194,4.03e-08,59;CL:0000576,4.03e-08,59;CL:0000040,4.03e-08,59;CL:0000559,4.03e-08,59;CL:0002009,9.47e-08,61;CL:0000766,4.31e-07,72;CL:0000839,6.36e-07,66;CL:0000557,8.99e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000051;4.93e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.62e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.66e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.85e-17!102;UBERON:0003061!4.85e-17!102;UBERON:0002193!4.47e-16!112;UBERON:0007023!1.86e-15!115;UBERON:0001049!4.07e-15!57;UBERON:0005068!4.07e-15!57;UBERON:0006241!4.07e-15!57;UBERON:0007135!4.07e-15!57;UBERON:0002780!1.73e-12!41;UBERON:0001890!1.73e-12!41;UBERON:0006240!1.73e-12!41;UBERON:0003080!5.78e-12!42;UBERON:0001893!1.87e-11!34;UBERON:0002020!2.01e-11!34;UBERON:0003528!2.01e-11!34;UBERON:0002371!2.15e-11!80;UBERON:0002616!5.04e-11!59;UBERON:0002791!9.66e-11!33;UBERON:0001474!3.23e-10!86;UBERON:0001017!5.20e-10!82;UBERON:0002405!6.43e-10!115;UBERON:0001869!7.17e-10!32;UBERON:0005743!1.63e-09!86;UBERON:0000955!2.09e-09!69;UBERON:0006238!2.09e-09!69;UBERON:0003075!1.44e-08!86;UBERON:0007284!1.44e-08!86;UBERON:0002619!1.50e-08!22;UBERON:0004765!2.36e-08!101;UBERON:0001434!2.36e-08!101;UBERON:0000073!4.20e-08!94;UBERON:0001016!4.20e-08!94;UBERON:0002346!1.16e-07!90;UBERON:0001950!3.89e-07!20;UBERON:0000956!5.85e-07!25;UBERON:0000203!5.85e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.11e-12;6!UBERON:0000988;1.87e-09;3!UBERON:0004732;1.41e-07;13!UBERON:0001897;3.21e-07;2!UBERON:0010225;3.21e-07;2!UBERON:0005162;3.80e-07;2!UBERON:0000122;3.80e-07;2!UBERON:0000073;4.74e-07;53!UBERON:0002616;4.74e-07;53!UBERON:0002148;5.74e-07;2!UBERON:0006331;5.74e-07;2!UBERON:0009662;5.74e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.83e-12,6;UBERON:0001049,2.73e-12,56;UBERON:0005068,2.73e-12,56;UBERON:0006241,2.73e-12,56;UBERON:0007135,2.73e-12,56;UBERON:0000073,3.80e-10,53;UBERON:0002616,3.80e-10,53;UBERON:0000988,1.08e-09,3;UBERON:0003076,7.23e-09,15;UBERON:0003057,7.23e-09,15;UBERON:0003075,4.17e-08,82;UBERON:0007284,4.17e-08,82;UBERON:0001017,4.50e-08,81;UBERON:0000955,5.18e-08,68;UBERON:0006238,5.18e-08,68;UBERON:0001016,8.96e-08,89;UBERON:0004732,1.06e-07,13;UBERON:0002346,1.54e-07,86;UBERON:0001897,2.80e-07,2;UBERON:0010225,2.80e-07,2;UBERON:0005162,3.48e-07,2;UBERON:0000122,3.48e-07,2;UBERON:0002148,5.34e-07,2;UBERON:0006331,5.34e-07,2;UBERON:0009662,5.34e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,1.80621296789881,1.49550484495991,2.75354993794233,0,0.154816123316076,0,0,0,1.70427841276664,3.69640004467296,0.587200878669695,0,0.200544447470142,0.217010870715852,0.447830948479849,0.32389366601898,0,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,1.7261543539329,1.5369642391746,2.83778675866302,0.344745680736619,0,0,0.752969358170419,0.545812300115692,0.449446968890169,0.918251677112708,0.641858054152187,1.27867425159808,2.30895910130701,2.19410023383795,2.98357325372886,0.290209238628584,0,0.622822248995575,0.502497330513487,2.60741459210101,4.34377689410233,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,2.73069305631066,2.66852776159066,6.40095333849761,2.40237592221607,1.72425731986345,2.64417949113945,2.86216126360609,2.27685187643779,1.17447437874188,0.764546456250458,0,1.12101712596307,0.526768169550154,1.37696839079683,0,0,0,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.520237390239513,0,0.276350017785848,0,0.741432815810302,0.535081656179426,1.04535523804977,0.113309342697566,0.383220493601921,1.37450978193052,0.506039384039006,0.318565414324097,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.473554504088034,0,0,0,1.30341963494519,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.196468613246569,0,0,7.46459005405772,4.35324343248168,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.761016608938393,0,0,0.246217006087397,1.8720341211139,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.431255149719035,0.385029108839245,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.952927101831156,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0.557409525377156,0,0,0.159426272728822,0.199579371432817,2.48956981172077,0.423347165447766,0,0.280797178113459,0,0,0,0.846458889008016,0,0,0,0.687010689511529,0,0,0,0,0,0,0.540911356951966,0,0,0,0.293016358543788,0,0,2.84136146806413,0,0,0,0,0.562677665642051,0,0,0,0,0.276283915531148,0,0,3.56945935837101,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,1.11321717794222,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0.593042257361244,0.617819694732514,0.417687798021821,3.70706231393724,0,1.87411556580271,0.547364367646998,0.19566461893209,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.823040347426423,0.977756913674015,0.64127056201227,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0.547621515567972,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,1.08270229666224,0.0846733320657845,1.59045937961861,1.0896272488926,0,0,0,0.674921674654501,0,1.27574068981852,0,0.157611414598396,0,0.211200673038813,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,2.45637617086946,1.58679122091228,0,0,0.213574825135389,0,0,0,2.96417447846916,4.26274094333136,0,0,0,0,0,0,0,0.244052529803926,0.876336514945499,2.29363678276028,0.443716206147409,1.80079568530012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0.829550616910385,0.584580926518165,0.265729680626726,0.654261577023377,0,0,0,2.39984875025916,0.213383459388282,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0.918736432059601,0.770750701157514,1.41696576325585,0.957803154342908,0.615349092722265,0,0.691572524642179,0.484426936895553,1.42769420259154,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,4.28782650029431,1.41828927698629,0.781078098613847,0.206686796501184,1.20490039368423,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,2.53514772622714,0,1.90315252335129,0.986591603442736,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0,0,0,1.17780280338292,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,2.1593931382644,1.48523200163543,0.8453114551668,0,0.751871343838829,0.515663103788617,2.79835236589801,0,0,0.320965466756673,0,0,2.58011249672612,0.473314686579554,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97501663675268,1.44806194206653,0.639701945702943,0.23806443146374,0.322944549180031,0.124149428591716,0,0,0,0,0,1.21233695426258,0,0,0.244209805832924,0,0,0.179650404213174,0,0,0,0,0,3.52625341533556 | |||
|short_description=p7@RASGRP3 | |||
}} |
Latest revision as of 23:56, 16 September 2015
Short description: | p7@RASGRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RASGRP3_5end |
Coexpression cluster: | C2698_CD19_b_lymphoma_Burkitt_Dendritic_immature_Monocytederived |
Association with transcript: | 31bp_to_NM_001139488, uc010ync.1_5end |
EntrezGene: | RASGRP3 |
HGNC: | 14545 |
UniProt: | Q53SD7Q8IV61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.74e-38 | 24 |
pro-B cell | 8.74e-38 | 24 |
nongranular leukocyte | 2.60e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 7.17e-24 | 120 |
leukocyte | 1.93e-21 | 136 |
lymphoid lineage restricted progenitor cell | 1.09e-20 | 52 |
B cell | 2.02e-20 | 14 |
lymphocyte | 3.41e-20 | 53 |
common lymphoid progenitor | 3.41e-20 | 53 |
hematopoietic oligopotent progenitor cell | 7.10e-18 | 161 |
hematopoietic multipotent progenitor cell | 7.10e-18 | 161 |
hematopoietic stem cell | 9.88e-17 | 168 |
hematopoietic cell | 2.14e-15 | 177 |
monopoietic cell | 4.03e-08 | 59 |
monocyte | 4.03e-08 | 59 |
monoblast | 4.03e-08 | 59 |
promonocyte | 4.03e-08 | 59 |
macrophage dendritic cell progenitor | 9.47e-08 | 61 |
myeloid leukocyte | 4.31e-07 | 72 |
myeloid lineage restricted progenitor cell | 6.36e-07 | 66 |
granulocyte monocyte progenitor cell | 8.99e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
brainstem | 1.83e-12 | 6 |
neural tube | 2.73e-12 | 56 |
neural rod | 2.73e-12 | 56 |
future spinal cord | 2.73e-12 | 56 |
neural keel | 2.73e-12 | 56 |
regional part of nervous system | 3.80e-10 | 53 |
regional part of brain | 3.80e-10 | 53 |
pons | 1.08e-09 | 3 |
posterior neural tube | 7.23e-09 | 15 |
chordal neural plate | 7.23e-09 | 15 |
neural plate | 4.17e-08 | 82 |
presumptive neural plate | 4.17e-08 | 82 |
central nervous system | 4.50e-08 | 81 |
brain | 5.18e-08 | 68 |
future brain | 5.18e-08 | 68 |
nervous system | 8.96e-08 | 89 |
segmental subdivision of nervous system | 1.06e-07 | 13 |
neurectoderm | 1.54e-07 | 86 |
dorsal plus ventral thalamus | 2.80e-07 | 2 |
thalamic complex | 2.80e-07 | 2 |
multi cell component structure | 3.48e-07 | 2 |
neuron projection bundle | 3.48e-07 | 2 |
locus ceruleus | 5.34e-07 | 2 |
brainstem nucleus | 5.34e-07 | 2 |
hindbrain nucleus | 5.34e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.66e-08 | 10 |