FFCP PHASE1:Hg19::chr2:46769556..46769568,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23433 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17736 | |||
|TSSclassifier=strong | |||
|UniProt=P17081 | |||
|association_with_transcript=-298bp_to_ENST00000238738,NM_012249,uc002rva.2_5end | |||
|cluster_id=chr2:46769556..46769568,+ | |||
|description=CAGE_peak_7_at_RHOQ_5end | |||
|id=chr2:46769556..46769568,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.81e-16!42;CL:0000766!1.51e-15!76;CL:0000860!2.37e-15!45;CL:0000557!8.96e-15!71;CL:0000839!2.61e-13!70;CL:0002194!9.01e-13!63;CL:0000576!9.01e-13!63;CL:0000040!9.01e-13!63;CL:0000559!9.01e-13!63;CL:0002009!1.28e-12!65;CL:0000763!8.50e-11!112;CL:0000049!8.50e-11!112;CL:0000738!3.78e-09!140;CL:0000988!1.59e-08!182;CL:0000037!5.01e-08!172;CL:0000566!5.01e-08!172;CL:0002031!5.48e-08!124;CL:0002087!1.22e-07!119;CL:0002032!2.05e-07!165;CL:0000837!2.05e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.72e-35;33!CL:0002057;2.72e-35;33!CL:0000473;1.50e-26;39!CL:0000234;1.50e-26;39!CL:0000576;2.12e-17;48!CL:0000766;8.46e-12;69!CL:0000763;1.85e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-33,42;CL:0002057,1.64e-33,42;CL:0000473,2.28e-32,48;CL:0000234,2.28e-32,48;CL:0000766,2.61e-27,72;CL:0002194,5.25e-25,59;CL:0000576,5.25e-25,59;CL:0000040,5.25e-25,59;CL:0000559,5.25e-25,59;CL:0000557,3.56e-24,67;CL:0002009,4.67e-24,61;CL:0000763,1.90e-22,108;CL:0000049,1.90e-22,108;CL:0000839,6.23e-22,66;CL:0000037,4.60e-15,168;CL:0002032,1.50e-14,161;CL:0000837,1.50e-14,161;CL:0000988,5.38e-14,177;CL:0000738,1.55e-13,136;CL:0002087,3.39e-12,115;CL:0002031,1.66e-11,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.07e-25;42!CL:0000049;5.98e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.80e-14!86;UBERON:0002371!5.98e-14!80;UBERON:0004765!2.51e-12!101;UBERON:0001434!2.51e-12!101;UBERON:0002390!1.46e-11!102;UBERON:0003061!1.46e-11!102;UBERON:0002193!1.80e-11!112;UBERON:0002405!3.71e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.43e-23,76;UBERON:0001474,3.68e-21,82;UBERON:0004765,7.14e-19,90;UBERON:0002405,4.09e-18,93;UBERON:0002390,5.90e-17,98;UBERON:0003061,5.90e-17,98;UBERON:0001434,1.59e-16,100;UBERON:0002193,5.87e-15,108;UBERON:0003081,2.98e-08,203;UBERON:0002204,4.59e-08,167 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.393553906568396,1.18009283054671,0,0.928896739896456,0,0,0,0.232401601740905,0,1.76160263600908,0.553995408531877,1.80490002723128,0.868043482863407,0.223915474239924,0.32389366601898,0.257575567634187,0.290796477559129,0.755751887377619,0.727752183563449,1.85943229524548,0.822335776043652,0.929119112685311,0.863077176966451,0.512321413058201,1.41889337933151,1.37898272294647,6.45484683583826,1.35426486594342,1.12945403725563,1.09162460023138,0.224723484445085,1.22433556948361,0.962787081228281,0,0.989553900560148,1.19678194572979,0.852449501065388,1.16083695451434,2.26954089876456,1.86846674698672,2.51248665256743,4.17186334736161,1.3031330682307,1.21079900526674,2.57794345191295,0,0.633765858935825,0,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,1.17447437874188,0,1.32171328579026,1.12101712596307,1.58030450865046,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0.183201743930407,1.31780417436063,0,0,0.993943903390637,0,0.132409180813219,0.573673241497627,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0,0,0.468642863667593,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.45071417671979,0,0.538168907066586,0,0,0,0.206105058476878,0,0,0,0.194874010322397,0.252433774244115,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0.57978255948989,0.545492241181669,0,0.121973706129595,0.397589304964456,0.232387885739037,0,0.252320850875628,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.201057944823262,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0.492663237895943,0.088048434013226,0.621984346622316,0.432359860250884,0.75745460055828,0.761974731506028,0.381988425558278,0,0,1.13110241973656,0.300343057843917,0.857479297891735,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0.335032530668698,0,0,2.99161459204025,0.828831026872071,0,0,0.271265023699736,0.623912584592421,0.713715955188647,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0,0.343143423810856,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0.519254429183621,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0.182091168006717,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0.211103257785751,0,0.340187410553031,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0.413509717453592,0.322260734604821,0.580066775656914,0.255679882248303,0.445160178233687,0.495854746082934,0.960950336825531,0.382838137483752,1.11273558941105,0,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0.392996164052485,0,0,0.422215270595328,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.355709216742071,0,0.399158742865633,0.191505370132367,2.54008299268659,0,0,0.228234679033192,0.313359791546046,2.50634477090067,0.169291777801603,0,0,0,0,0.921722292925374,0.447352215784832,0.166849141711909,0,0,0,0,0.66614393599564,0,0.18714054040822,0,0.242721043499027,0.111443384277478,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0.16480387422676,0,0.597743964753209,0,0.503865495708552,0,0.861593638227486,0.311039587661807,0.0898683511473268,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.438770794307945,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0.3190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| |||
|short_description=p7@RHOQ | |||
}} |
Latest revision as of 10:55, 17 September 2015
Short description: | p7@RHOQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RHOQ_5end |
Coexpression cluster: | NA |
Association with transcript: | -298bp_to_ENST00000238738, NM_012249, uc002rva.2_5end |
EntrezGene: | RHOQ |
HGNC: | 17736 |
UniProt: | P17081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.64e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-33 | 42 |
defensive cell | 2.28e-32 | 48 |
phagocyte | 2.28e-32 | 48 |
myeloid leukocyte | 2.61e-27 | 72 |
monopoietic cell | 5.25e-25 | 59 |
monocyte | 5.25e-25 | 59 |
monoblast | 5.25e-25 | 59 |
promonocyte | 5.25e-25 | 59 |
granulocyte monocyte progenitor cell | 3.56e-24 | 67 |
macrophage dendritic cell progenitor | 4.67e-24 | 61 |
myeloid cell | 1.90e-22 | 108 |
common myeloid progenitor | 1.90e-22 | 108 |
myeloid lineage restricted progenitor cell | 6.23e-22 | 66 |
hematopoietic stem cell | 4.60e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.50e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-14 | 161 |
hematopoietic cell | 5.38e-14 | 177 |
leukocyte | 1.55e-13 | 136 |
nongranular leukocyte | 3.39e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.66e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.43e-23 | 76 |
bone element | 3.68e-21 | 82 |
skeletal element | 7.14e-19 | 90 |
immune system | 4.09e-18 | 93 |
hematopoietic system | 5.90e-17 | 98 |
blood island | 5.90e-17 | 98 |
skeletal system | 1.59e-16 | 100 |
hemolymphoid system | 5.87e-15 | 108 |
lateral plate mesoderm | 2.98e-08 | 203 |
musculoskeletal system | 4.59e-08 | 167 |