FFCP PHASE1:Hg19::chr3:100468772..100468781,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:100468772..100468781,- | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_at_chr3:100468772..100468781,- | |||
|id=chr3:100468772..100468781,- | |||
|ontology_enrichment_celltype=CL:0000055!3.07e-07!180;CL:0000057!7.40e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.46e-15;9!CL:0000447;2.46e-15;9!CL:0000138;3.35e-13;6!CL:0002591;1.30e-09;1!CL:0000569;2.12e-09;4!CL:0000327;2.86e-09;15!CL:0002595;1.55e-07;5!CL:0000499;2.14e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.08e-15,9;CL:0000447,3.08e-15,9;CL:0000058,4.31e-13,6;CL:0000138,4.31e-13,6;CL:0002591,1.91e-09,1;CL:0000569,2.08e-09,4;CL:0000011,2.08e-09,4;CL:0000327,3.26e-09,15;CL:0002595,1.55e-07,5;CL:0000499,2.38e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.30e-09;1!UBERON:0003099;1.30e-09;1!UBERON:0003852;1.30e-09;1!CL:0000011;2.12e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!5.22e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2513;4.08e-10;1!DOID:3112;1.30e-09;1!DOID:3369;1.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.09e-10,1;DOID:3369,8.91e-10,1;DOID:3112,1.36e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!1.49e-07!5;UBERON:0004532!1.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;1.30e-09;1!UBERON:0005705;1.30e-09;1!UBERON:0008811;1.30e-09;1!UBERON:0008193;1.30e-09;1!UBERON:0010912;1.30e-09;1!UBERON:0002514;1.30e-09;1!UBERON:0003457;1.30e-09;1!UBERON:0008907;1.30e-09;1!UBERON:0008001;1.30e-09;1!UBERON:0007213;1.30e-09;1!UBERON:0009891;1.30e-09;1!UBERON:0007914;1.30e-09;1!UBERON:0007375;1.30e-09;1!UBERON:0003323;1.30e-09;1!UBERON:0010258;1.30e-09;1!UBERON:0005253;1.30e-09;1!UBERON:0007842;1.30e-09;1!UBERON:0002397;1.30e-09;1!UBERON:0003113;1.30e-09;1!UBERON:0003277;1.30e-09;1!UBERON:0001709;1.30e-09;1!UBERON:0002244;1.30e-09;1!UBERON:0005620;1.30e-09;1!UBERON:0010364;1.30e-09;1!UBERON:0004288;1.30e-09;1!UBERON:0003834;1.55e-07;5!UBERON:0001533;1.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,9.70e-10,1;UBERON:0008811,9.70e-10,1;UBERON:0006258,9.70e-10,1;UBERON:0005876,9.70e-10,1;UBERON:0004874,9.70e-10,1;UBERON:0005705,2.26e-09,1;UBERON:0008193,2.26e-09,1;UBERON:0010912,2.26e-09,1;UBERON:0002514,2.26e-09,1;UBERON:0003457,2.26e-09,1;UBERON:0008907,2.26e-09,1;UBERON:0008001,2.26e-09,1;UBERON:0007213,2.26e-09,1;UBERON:0009891,2.26e-09,1;UBERON:0007914,2.26e-09,1;UBERON:0009292,2.26e-09,1;UBERON:0003099,2.26e-09,1;UBERON:0007375,2.26e-09,1;UBERON:0003323,2.26e-09,1;UBERON:0010258,2.26e-09,1;UBERON:0007842,2.26e-09,1;UBERON:0009494,2.26e-09,1;UBERON:0010042,2.26e-09,1;UBERON:0010045,2.26e-09,1;UBERON:0010259,2.26e-09,1;UBERON:0010359,2.26e-09,1;UBERON:0009526,2.26e-09,1;UBERON:0002397,2.26e-09,1;UBERON:0003113,2.26e-09,1;UBERON:0003277,2.26e-09,1;UBERON:0001709,2.26e-09,1;UBERON:0004066,2.26e-09,1;UBERON:0002244,2.26e-09,1;UBERON:0005620,2.26e-09,1;UBERON:0004362,2.26e-09,1;UBERON:0010364,2.26e-09,1;UBERON:0010046,2.26e-09,1;UBERON:0005868,2.26e-09,1;UBERON:0007238,2.26e-09,1;UBERON:0004288,2.26e-09,1;UBERON:0004068,2.26e-09,1;UBERON:0010334,2.26e-09,1;UBERON:0003852,2.26e-09,1;UBERON:0010253,2.26e-09,1;UBERON:0003834,1.55e-07,5;UBERON:0001533,1.55e-07,5 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,1.00267582127178,1.44846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,2.91300197789081,0.573673241497627,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0.448346041655403,0,0.161872944368132,0,0.408308342509787,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0,0.323292113637624,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.479249710983165,0,0,2.46128221334885,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0.946214490203608,0.468565659970853,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0,0,0.640695746278505,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0,0,0,0,0,0,0,0,1.5740617341532,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0,0,1.13008116620243,0,0,1.75380354101505,0,0,0,0,0,0,0,0,0,0.633322905892992,6.25660296623814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.20453736500431,0,4.66559381492711,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,1.66441758450784,0,0.251567901752575,1.77962244319307,2.74608082076308,1.36107831386915,0.310874401165561,0.147855149989634,0,0.449803112163605,0,0.829412415681711,0,0.521745061811734,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,1.39210127963548,0.398095888698616,1.20008329398946,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,1.25362188757041,0,0,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,1.31017534008077,0,0,0,0,0,0,0,1.48863353516788,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0.828864656652147,0.17071847709395,0,0,0.354996002191696,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:100468772..100468781,- | |||
}} |
Latest revision as of 13:38, 29 July 2015
Short description: | p@chr3:100468772..100468781, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100468772..100468781, - |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.08e-15 | 9 |
carbohydrate secreting cell | 3.08e-15 | 9 |
chondroblast | 4.31e-13 | 6 |
chondrocyte | 4.31e-13 | 6 |
smooth muscle cell of the pulmonary artery | 1.91e-09 | 1 |
cardiac mesenchymal cell | 2.08e-09 | 4 |
migratory trunk neural crest cell | 2.08e-09 | 4 |
extracellular matrix secreting cell | 3.26e-09 | 15 |
smooth muscle cell of the subclavian artery | 1.55e-07 | 5 |
stromal cell | 2.38e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.09e-10 | 1 |
peripheral primitive neuroectodermal tumor | 8.91e-10 | 1 |
papillary adenocarcinoma | 1.36e-09 | 1 |