FFCP PHASE1:Mm9::chr12:106575390..106575401,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=401|UniProt=|association_with_transcript=-24bp_to_uc007oyh.1_5end|description=CAGE_peak_2_at_uc007oyh.1_5end|id=chr12:106575390..106575401,+|ontology_enrichment_celltype=CL:0000117!3.78e-21!23;CL:0000337!3.78e-21!23;CL:0000540!4.13e-14!33;CL:0000047!4.13e-14!33;CL:0000031!4.13e-14!33;CL:0000404!4.13e-14!33;CL:0000393!7.54e-11!39;CL:0000211!7.54e-11!39;CL:0000221!6.84e-10!44;CL:0000133!6.84e-10!44;CL:0002319!3.29e-09!43;CL:0000055!5.07e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-31,23;CL:0000337,1.21e-31,23;CL:0000540,8.03e-24,33;CL:0000047,8.03e-24,33;CL:0000031,8.03e-24,33;CL:0000404,8.03e-24,33;CL:0000393,1.29e-19,39;CL:0000211,1.29e-19,39;CL:0002319,1.83e-17,43;CL:0000221,5.48e-17,44;CL:0000133,5.48e-17,44;CL:0002610,4.94e-11,3;CL:0002612,5.46e-10,3;CL:0002614,5.46e-10,3;CL:0000120,1.56e-09,3;CL:0002321,2.22e-09,70;CL:0002611,1.68e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.99e-24!73;UBERON:0005743!1.99e-24!73;UBERON:0001049!6.82e-24!52;UBERON:0005068!6.82e-24!52;UBERON:0006241!6.82e-24!52;UBERON:0007135!6.82e-24!52;UBERON:0000073!2.18e-23!75;UBERON:0001016!2.18e-23!75;UBERON:0000033!5.94e-22!63;UBERON:0000955!1.19e-21!50;UBERON:0006238!1.19e-21!50;UBERON:0002616!7.69e-21!49;UBERON:0002020!9.40e-21!34;UBERON:0004121!1.21e-19!102;UBERON:0000924!1.21e-19!102;UBERON:0006601!1.21e-19!102;UBERON:0002346!2.42e-19!71;UBERON:0003075!2.42e-19!71;UBERON:0007284!2.42e-19!71;UBERON:0002791!3.34e-15!29;UBERON:0003528!3.34e-15!29;UBERON:0001893!3.34e-15!29;UBERON:0003080!1.39e-14!40;UBERON:0003056!2.27e-14!49;UBERON:0007811!1.40e-13!86;UBERON:0002780!1.53e-13!39;UBERON:0001890!1.53e-13!39;UBERON:0006240!1.53e-13!39;UBERON:0000153!3.90e-12!94;UBERON:0003076!1.18e-10!12;UBERON:0003057!1.18e-10!12;UBERON:0002420!1.42e-09!8;UBERON:0007245!1.42e-09!8;UBERON:0010009!1.42e-09!8;UBERON:0010011!1.42e-09!8;UBERON:0000454!1.42e-09!8;UBERON:0002240!1.43e-08!6;UBERON:0005174!1.43e-08!6;UBERON:0001137!1.43e-08!6;UBERON:0002298!1.56e-08!6;UBERON:0000956!5.11e-08!21;UBERON:0001869!5.11e-08!21;UBERON:0000203!5.11e-08!21;UBERON:0001948!1.98e-07!5;UBERON:0002315!1.98e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0000073,1.94e-29,54;UBERON:0003076,4.50e-25,12;UBERON:0003057,4.50e-25,12;UBERON:0001049,6.52e-25,52;UBERON:0005068,6.52e-25,52;UBERON:0006241,6.52e-25,52;UBERON:0007135,6.52e-25,52;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002346,2.04e-19,64;UBERON:0003075,2.04e-19,64;UBERON:0007284,2.04e-19,64;UBERON:0002240,1.27e-18,6;UBERON:0005174,1.27e-18,6;UBERON:0001137,1.27e-18,6;UBERON:0010371,3.38e-18,73;UBERON:0002420,2.51e-17,8;UBERON:0007245,2.51e-17,8;UBERON:0010009,2.51e-17,8;UBERON:0010011,2.51e-17,8;UBERON:0000454,2.51e-17,8;UBERON:0001948,7.48e-16,5;UBERON:0002315,7.48e-16,5;UBERON:0002020,9.13e-15,34;UBERON:0002616,4.35e-14,46;UBERON:0000955,1.02e-13,47;UBERON:0006238,1.02e-13,47;UBERON:0010314,1.70e-13,92;UBERON:0002950,3.75e-13,4;UBERON:0001891,3.75e-13,4;UBERON:0009616,3.75e-13,4;UBERON:0010286,3.75e-13,4;UBERON:0004684,4.94e-11,3;UBERON:0002275,4.94e-11,3;UBERON:0002038,5.46e-10,3;UBERON:0009663,5.46e-10,3;UBERON:0009661,5.46e-10,3;UBERON:0000125,5.46e-10,3;UBERON:0002308,5.46e-10,3;UBERON:0002257,5.46e-10,3;UBERON:0000369,2.80e-09,5;UBERON:0002435,2.80e-09,5;UBERON:0000204,2.80e-09,5;UBERON:0010082,2.80e-09,5;UBERON:0004111,4.83e-09,122;UBERON:0000025,5.97e-09,114;UBERON:0004733,6.55e-09,6;UBERON:0004732,6.55e-09,6;UBERON:0002028,6.55e-09,6;UBERON:0007277,6.55e-09,6;UBERON:0003080,9.44e-09,40;UBERON:0011216,1.08e-08,194;UBERON:0002256,1.68e-07,2;UBERON:0002780,2.18e-07,39;UBERON:0001890,2.18e-07,39;UBERON:0006240,2.18e-07,39;UBERON:0001896,5.30e-07,2;UBERON:0002298,5.30e-07,2;UBERON:0005290,5.30e-07,2;UBERON:0010096,5.30e-07,2;UBERON:0003528,7.33e-07,29;UBERON:0002791,7.33e-07,29;UBERON:0001893,7.33e-07,29;UBERON:0003056,9.84e-07,49|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,1.99955689082663,2.42955395046775,0.61245399607477,0.479227355091182,0,4.40463523997555,2.93680877595932,3.5329502648936,0.131886287730194,1.00636407962651,1.04182674111352,1.3959149950069,1.68828783009504,2.29197371665215,2.94628585473668,1.99320353118744,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,3.80615036115011,4.39838084308256,0,0,0,0,4.04434726393021,1.37250180845588,1.38219787324151,0.347648640384553,0,2.90903262383384,2.27137768294861,0.101839363850316,0,0,0,0,0,0,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,0.859265911718438,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0.231867835620421|short_description=p2@uc007oyh.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-24bp_to_uc007oyh.1_5end | |||
|cluster_id=chr12:106575390..106575401,+ | |||
|description=CAGE_peak_2_at_uc007oyh.1_5end | |||
|id=chr12:106575390..106575401,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.78e-21!23;CL:0000337!3.78e-21!23;CL:0000540!4.13e-14!33;CL:0000047!4.13e-14!33;CL:0000031!4.13e-14!33;CL:0000404!4.13e-14!33;CL:0000393!7.54e-11!39;CL:0000211!7.54e-11!39;CL:0000221!6.84e-10!44;CL:0000133!6.84e-10!44;CL:0002319!3.29e-09!43;CL:0000055!5.07e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-31,23;CL:0000337,1.21e-31,23;CL:0000540,8.03e-24,33;CL:0000047,8.03e-24,33;CL:0000031,8.03e-24,33;CL:0000404,8.03e-24,33;CL:0000393,1.29e-19,39;CL:0000211,1.29e-19,39;CL:0002319,1.83e-17,43;CL:0000221,5.48e-17,44;CL:0000133,5.48e-17,44;CL:0002610,4.94e-11,3;CL:0002612,5.46e-10,3;CL:0002614,5.46e-10,3;CL:0000120,1.56e-09,3;CL:0002321,2.22e-09,70;CL:0002611,1.68e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.99e-24!73;UBERON:0005743!1.99e-24!73;UBERON:0001049!6.82e-24!52;UBERON:0005068!6.82e-24!52;UBERON:0006241!6.82e-24!52;UBERON:0007135!6.82e-24!52;UBERON:0000073!2.18e-23!75;UBERON:0001016!2.18e-23!75;UBERON:0000033!5.94e-22!63;UBERON:0000955!1.19e-21!50;UBERON:0006238!1.19e-21!50;UBERON:0002616!7.69e-21!49;UBERON:0002020!9.40e-21!34;UBERON:0004121!1.21e-19!102;UBERON:0000924!1.21e-19!102;UBERON:0006601!1.21e-19!102;UBERON:0002346!2.42e-19!71;UBERON:0003075!2.42e-19!71;UBERON:0007284!2.42e-19!71;UBERON:0002791!3.34e-15!29;UBERON:0003528!3.34e-15!29;UBERON:0001893!3.34e-15!29;UBERON:0003080!1.39e-14!40;UBERON:0003056!2.27e-14!49;UBERON:0007811!1.40e-13!86;UBERON:0002780!1.53e-13!39;UBERON:0001890!1.53e-13!39;UBERON:0006240!1.53e-13!39;UBERON:0000153!3.90e-12!94;UBERON:0003076!1.18e-10!12;UBERON:0003057!1.18e-10!12;UBERON:0002420!1.42e-09!8;UBERON:0007245!1.42e-09!8;UBERON:0010009!1.42e-09!8;UBERON:0010011!1.42e-09!8;UBERON:0000454!1.42e-09!8;UBERON:0002240!1.43e-08!6;UBERON:0005174!1.43e-08!6;UBERON:0001137!1.43e-08!6;UBERON:0002298!1.56e-08!6;UBERON:0000956!5.11e-08!21;UBERON:0001869!5.11e-08!21;UBERON:0000203!5.11e-08!21;UBERON:0001948!1.98e-07!5;UBERON:0002315!1.98e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0000073,1.94e-29,54;UBERON:0003076,4.50e-25,12;UBERON:0003057,4.50e-25,12;UBERON:0001049,6.52e-25,52;UBERON:0005068,6.52e-25,52;UBERON:0006241,6.52e-25,52;UBERON:0007135,6.52e-25,52;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002346,2.04e-19,64;UBERON:0003075,2.04e-19,64;UBERON:0007284,2.04e-19,64;UBERON:0002240,1.27e-18,6;UBERON:0005174,1.27e-18,6;UBERON:0001137,1.27e-18,6;UBERON:0010371,3.38e-18,73;UBERON:0002420,2.51e-17,8;UBERON:0007245,2.51e-17,8;UBERON:0010009,2.51e-17,8;UBERON:0010011,2.51e-17,8;UBERON:0000454,2.51e-17,8;UBERON:0001948,7.48e-16,5;UBERON:0002315,7.48e-16,5;UBERON:0002020,9.13e-15,34;UBERON:0002616,4.35e-14,46;UBERON:0000955,1.02e-13,47;UBERON:0006238,1.02e-13,47;UBERON:0010314,1.70e-13,92;UBERON:0002950,3.75e-13,4;UBERON:0001891,3.75e-13,4;UBERON:0009616,3.75e-13,4;UBERON:0010286,3.75e-13,4;UBERON:0004684,4.94e-11,3;UBERON:0002275,4.94e-11,3;UBERON:0002038,5.46e-10,3;UBERON:0009663,5.46e-10,3;UBERON:0009661,5.46e-10,3;UBERON:0000125,5.46e-10,3;UBERON:0002308,5.46e-10,3;UBERON:0002257,5.46e-10,3;UBERON:0000369,2.80e-09,5;UBERON:0002435,2.80e-09,5;UBERON:0000204,2.80e-09,5;UBERON:0010082,2.80e-09,5;UBERON:0004111,4.83e-09,122;UBERON:0000025,5.97e-09,114;UBERON:0004733,6.55e-09,6;UBERON:0004732,6.55e-09,6;UBERON:0002028,6.55e-09,6;UBERON:0007277,6.55e-09,6;UBERON:0003080,9.44e-09,40;UBERON:0011216,1.08e-08,194;UBERON:0002256,1.68e-07,2;UBERON:0002780,2.18e-07,39;UBERON:0001890,2.18e-07,39;UBERON:0006240,2.18e-07,39;UBERON:0001896,5.30e-07,2;UBERON:0002298,5.30e-07,2;UBERON:0005290,5.30e-07,2;UBERON:0010096,5.30e-07,2;UBERON:0003528,7.33e-07,29;UBERON:0002791,7.33e-07,29;UBERON:0001893,7.33e-07,29;UBERON:0003056,9.84e-07,49 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,1.99955689082663,2.42955395046775,0.61245399607477,0.479227355091182,0,4.40463523997555,2.93680877595932,3.5329502648936,0.131886287730194,1.00636407962651,1.04182674111352,1.3959149950069,1.68828783009504,2.29197371665215,2.94628585473668,1.99320353118744,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,3.80615036115011,4.39838084308256,0,0,0,0,4.04434726393021,1.37250180845588,1.38219787324151,0.347648640384553,0,2.90903262383384,2.27137768294861,0.101839363850316,0,0,0,0,0,0,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,0.859265911718438,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p2@uc007oyh.1 | |||
}} |
Latest revision as of 15:43, 4 August 2015
Short description: | p2@uc007oyh.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc007oyh.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | -24bp_to_uc007oyh.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.21e-31 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-31 | 23 |
neuron | 8.03e-24 | 33 |
neuronal stem cell | 8.03e-24 | 33 |
neuroblast | 8.03e-24 | 33 |
electrically signaling cell | 8.03e-24 | 33 |
electrically responsive cell | 1.29e-19 | 39 |
electrically active cell | 1.29e-19 | 39 |
neural cell | 1.83e-17 | 43 |
ectodermal cell | 5.48e-17 | 44 |
neurectodermal cell | 5.48e-17 | 44 |
raphe nuclei neuron | 4.94e-11 | 3 |
neuron of the ventral spinal cord | 5.46e-10 | 3 |
neuron of the substantia nigra | 5.46e-10 | 3 |
granule cell | 1.56e-09 | 3 |
embryonic cell | 2.22e-09 | 70 |
neuron of the dorsal spinal cord | 1.68e-07 | 2 |