FFCP PHASE1:Hg19::chrX:100663243..100663254,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:100663243..100663254,+
|short_description=p2@HNRNPH2
|description=CAGE_peak_2_at_HNRNPH2_5end
|association_with_transcript=-28bp_to_ENST00000316594_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3188 | |EntrezGene=3188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5042 | |HGNC=5042 | ||
|TSSclassifier=strong | |||
|UniProt=P55795 | |UniProt=P55795 | ||
|association_with_transcript=-28bp_to_ENST00000316594_5end | |||
|cluster_id=chrX:100663243..100663254,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_HNRNPH2_5end | |||
|id=chrX:100663243..100663254,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.91e-26!76;CL:0002057!5.45e-24!42;CL:0000839!5.50e-22!70;CL:0000860!6.99e-22!45;CL:0000763!1.73e-21!112;CL:0000049!1.73e-21!112;CL:0000557!6.29e-21!71;CL:0002009!3.03e-20!65;CL:0002194!1.09e-19!63;CL:0000576!1.09e-19!63;CL:0000040!1.09e-19!63;CL:0000559!1.09e-19!63;CL:0000738!2.54e-19!140;CL:0000037!7.54e-17!172;CL:0000566!7.54e-17!172;CL:0002032!1.69e-16!165;CL:0000837!1.69e-16!165;CL:0002031!2.59e-15!124;CL:0000988!9.69e-14!182;CL:0002087!1.26e-12!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-20;33!CL:0002057;1.62e-20;33!CL:0000473;1.38e-17;39!CL:0000234;1.38e-17;39!CL:0000576;2.36e-15;48!CL:0000766;6.25e-13;69!CL:0000763;5.46e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.03e-29,72;CL:0000839,6.09e-25,66;CL:0000473,8.53e-25,48;CL:0000234,8.53e-25,48;CL:0000860,2.40e-24,42;CL:0002057,2.40e-24,42;CL:0000763,5.18e-24,108;CL:0000049,5.18e-24,108;CL:0000557,6.40e-24,67;CL:0002009,3.69e-23,61;CL:0002194,1.32e-22,59;CL:0000576,1.32e-22,59;CL:0000040,1.32e-22,59;CL:0000559,1.32e-22,59;CL:0000738,1.96e-20,136;CL:0000037,5.39e-18,168;CL:0002032,9.41e-18,161;CL:0000837,9.41e-18,161;CL:0002031,2.12e-16,120;CL:0000988,3.05e-15,177;CL:0002087,1.43e-13,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.94e-18;42!CL:0000049;3.82e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!6.98e-18!86;UBERON:0002371!7.03e-18!80;UBERON:0004765!3.66e-16!101;UBERON:0001434!3.66e-16!101;UBERON:0002390!5.09e-15!102;UBERON:0003061!5.09e-15!102;UBERON:0002193!4.73e-14!112;UBERON:0002405!1.66e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.39e-20,76;UBERON:0001474,1.83e-20,82;UBERON:0004765,1.57e-18,90;UBERON:0002390,3.51e-17,98;UBERON:0003061,3.51e-17,98;UBERON:0002405,4.33e-17,93;UBERON:0001434,5.48e-17,100;UBERON:0002193,4.41e-16,108 | |||
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| ||
|short_description=p2@HNRNPH2 | |||
}} | }} |
Latest revision as of 18:07, 18 September 2015
Short description: | p2@HNRNPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNRNPH2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -28bp_to_ENST00000316594_5end |
EntrezGene: | HNRNPH2 |
HGNC: | 5042 |
UniProt: | P55795 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.03e-29 | 72 |
myeloid lineage restricted progenitor cell | 6.09e-25 | 66 |
defensive cell | 8.53e-25 | 48 |
phagocyte | 8.53e-25 | 48 |
classical monocyte | 2.40e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.40e-24 | 42 |
myeloid cell | 5.18e-24 | 108 |
common myeloid progenitor | 5.18e-24 | 108 |
granulocyte monocyte progenitor cell | 6.40e-24 | 67 |
macrophage dendritic cell progenitor | 3.69e-23 | 61 |
monopoietic cell | 1.32e-22 | 59 |
monocyte | 1.32e-22 | 59 |
monoblast | 1.32e-22 | 59 |
promonocyte | 1.32e-22 | 59 |
leukocyte | 1.96e-20 | 136 |
hematopoietic stem cell | 5.39e-18 | 168 |
hematopoietic oligopotent progenitor cell | 9.41e-18 | 161 |
hematopoietic multipotent progenitor cell | 9.41e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 2.12e-16 | 120 |
hematopoietic cell | 3.05e-15 | 177 |
nongranular leukocyte | 1.43e-13 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.39e-20 | 76 |
bone element | 1.83e-20 | 82 |
skeletal element | 1.57e-18 | 90 |
hematopoietic system | 3.51e-17 | 98 |
blood island | 3.51e-17 | 98 |
immune system | 4.33e-17 | 93 |
skeletal system | 5.48e-17 | 100 |
hemolymphoid system | 4.41e-16 | 108 |